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MS008609 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008609
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein
Genome locationscaffold4:2597950..2598303
RNA-Seq ExpressionMS008609
SyntenyMS008609
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452787.1 PREDICTED: uncharacterized protein LOC103493702 [Cucumis melo]1.9e-4583.04Show/hide
Query:  SMSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAF
        +MSRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF+IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAF
Subjt:  SMSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAF

Query:  VLKCRASLVFWE
        VLKC+ASL+FWE
Subjt:  VLKCRASLVFWE
XP_022142189.1 uncharacterized protein LOC111012362 [Momordica charantia]3.5e-55100Show/hide
Query:  MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFV
        MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFV
Subjt:  MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFV

Query:  LKCRASLVFWE
        LKCRASLVFWE
Subjt:  LKCRASLVFWE
XP_022936874.1 uncharacterized protein LOC111443331 [Cucurbita moschata]5.1e-4682.73Show/hide
Query:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL
        SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVL
Subjt:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL

Query:  KCRASLVFWE
        KC+ASL+FW+
Subjt:  KCRASLVFWE
XP_022977145.1 uncharacterized protein LOC111477299 [Cucurbita maxima]1.1e-4581.82Show/hide
Query:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL
        SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVL
Subjt:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL

Query:  KCRASLVFWE
        KC+ASL+FW+
Subjt:  KCRASLVFWE
XP_038899620.1 uncharacterized protein LOC120086878 [Benincasa hispida]1.3e-4686.36Show/hide
Query:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL
        SRRS FSSYDR VAVGLGLLAVVSPLYIDRRP++E  E+EESSIN GFWLP LL+TLIF+IAG+LHLEQRCARFDAYWIHRVGGSSCGIF ILLLLAFVL
Subjt:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL

Query:  KCRASLVFWE
        KC+ASL+FWE
Subjt:  KCRASLVFWE
TrEMBL top hitse value%identityAlignment
A0A1S3BUL9 uncharacterized protein LOC1034937029.4e-4683.04Show/hide
Query:  SMSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAF
        +MSRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF+IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAF
Subjt:  SMSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAF

Query:  VLKCRASLVFWE
        VLKC+ASL+FWE
Subjt:  VLKCRASLVFWE
A0A5D3D907 Uncharacterized protein9.4e-4683.04Show/hide
Query:  SMSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAF
        +MSRRS FSSYDR +AVGLGLLAVVSPLYIDRRP++E  E+EESSI+ GFWLP LLI LIF+IAG+LHLEQRCARFD YWIHRVGGSSCGIF ILLLLAF
Subjt:  SMSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAF

Query:  VLKCRASLVFWE
        VLKC+ASL+FWE
Subjt:  VLKCRASLVFWE
A0A6J1CKV5 uncharacterized protein LOC1110123621.7e-55100Show/hide
Query:  MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFV
        MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFV
Subjt:  MSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFV

Query:  LKCRASLVFWE
        LKCRASLVFWE
Subjt:  LKCRASLVFWE
A0A6J1F9J0 uncharacterized protein LOC1114433312.5e-4682.73Show/hide
Query:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL
        SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LLITLIF+IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVL
Subjt:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL

Query:  KCRASLVFWE
        KC+ASL+FW+
Subjt:  KCRASLVFWE
A0A6J1ILG7 uncharacterized protein LOC1114772995.5e-4681.82Show/hide
Query:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL
        SRRS FSSYDR VAVGLG+LAVVSPLYIDRRP+ + +E+EESS+N GFWLP LL+TLIF+IAG+LHLEQRCARFDAYWIHRVGGSSCGIF +LLLLAFVL
Subjt:  SRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVL

Query:  KCRASLVFWE
        KC+ASL+FW+
Subjt:  KCRASLVFWE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G21910.1 unknown protein6.3e-1848Show/hide
Query:  FSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRAS
        F++  +L+A+ L +LAV+SPLYIDR    +L+E+EE   +F F   +LL+ LI  IA  L+ +    RFD YWIHR+ GS  G+  IL+LL FVL C+AS
Subjt:  FSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKCRAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAACAAGGACTCTTGTTTTCCATGTCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGA
CCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTC
ACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGT
AGAGCTTCTCTCGTGTTCTGGGAG
mRNA sequenceShow/hide mRNA sequence
CAACAAGGACTCTTGTTTTCCATGTCGAGGAGGAGCGGGTTCTCGTCCTACGACCGGTTGGTGGCAGTGGGGCTCGGCCTTCTGGCGGTGGTTTCACCGCTCTACATCGA
CCGGAGACCGACCGTTGAGCTGGACGAGGATGAGGAATCATCCATTAACTTCGGGTTCTGGTTGCCTGTTCTTCTGATAACCTTGATCTTTGTTATTGCTGGTTTGCTTC
ACTTGGAACAGAGATGTGCCAGGTTTGATGCTTACTGGATTCACAGAGTTGGTGGCTCTTCTTGTGGCATATTCTTCATTCTTCTGCTTCTTGCATTTGTTTTGAAGTGT
AGAGCTTCTCTCGTGTTCTGGGAG
Protein sequenceShow/hide protein sequence
QQGLLFSMSRRSGFSSYDRLVAVGLGLLAVVSPLYIDRRPTVELDEDEESSINFGFWLPVLLITLIFVIAGLLHLEQRCARFDAYWIHRVGGSSCGIFFILLLLAFVLKC
RASLVFWE