; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008610 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008610
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/LRR-repeat protein 15 isoform X1
Genome locationscaffold4:2598797..2599871
RNA-Seq ExpressionMS008610
SyntenyMS008610
Gene Ontology termsGO:0010252 - auxin homeostasis (biological process)
GO:1905393 - plant organ formation (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591489.1 hypothetical protein SDJN03_13835, partial [Cucurbita argyrosperma subsp. sororia]1.3e-10688.44Show/hide
Query:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS
        MATKILW LLF ALFVSVFSA DSNVTDNPADKLVVVLNKNRTAHKL ALKDNPGLACLALQYIKAYQGKC  VGGPDGMKPPNSAF ETFAPNCGV+VS
Subjt:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS

Query:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
        SL+PITGRLLGCQSKYVHAPEAFSDVLMLN+KSLEIL +KN+TEVGAAVTGTDGGSPYFWCVLFSNGS+S+SFAFEGGVAKLTRPGCYSGANDQCS A+S
Subjt:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS

Query:  QFSTTNHILLLALTSLVAMAYALGV
        QF TT  +LLLALTSLVA+ Y  G+
Subjt:  QFSTTNHILLLALTSLVAMAYALGV

XP_022142177.1 uncharacterized protein LOC111012355 [Momordica charantia]3.8e-12298.68Show/hide
Query:  MATKILWFLLFFALFVSVFSATD--SNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV
        MATKILWFLLFFALFVSVFSATD  +NVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV
Subjt:  MATKILWFLLFFALFVSVFSATD--SNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV

Query:  VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA
        VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA
Subjt:  VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA

Query:  DSQFSTTNHILLLALTSLVAMAYALGV
        DSQFSTTNHILLLALTSLVAMAYALGV
Subjt:  DSQFSTTNHILLLALTSLVAMAYALGV

XP_022936072.1 uncharacterized protein LOC111442783 [Cucurbita moschata]3.4e-10788.89Show/hide
Query:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS
        MATKILW LLF ALFVSVFSA DSNVTDNPADKLVVVLNKNRTAHKL ALKDNPGLACLALQYIKAYQGKC  VGGPDGMKPPNSAF ETFAPNCGV+VS
Subjt:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS

Query:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
        SL+PITGRLLGCQSKYVHAPEAFSDVLMLN+KSLEIL +KN+TEVGAAVTGTDGGSPYFWCVLFSNGS+SNSFAFEGGVAKLTRPGCYSGANDQCS A+S
Subjt:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS

Query:  QFSTTNHILLLALTSLVAMAYALGV
        QF TT  +LLLALTSLVA+ Y  G+
Subjt:  QFSTTNHILLLALTSLVAMAYALGV

XP_022977104.1 uncharacterized protein LOC111477271 [Cucurbita maxima]1.2e-10789.33Show/hide
Query:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS
        MATKILW LLF ALFVSVFSA DSNVTDNPADKLVVVLNKNRTAHKL ALKDNPGLACLALQYIKAYQGKC  VGGPDGMKPPNSAF ETFAPNCGV+VS
Subjt:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS

Query:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
        SL+PITGRLLGCQSKYVHAPEAFSDVLMLN+KSLEIL +KN+TEVGAAVTGTDGGSPYFWCVLFSNGS+SNSFAFEGGVAKLTRPGCYSGANDQCS A+S
Subjt:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS

Query:  QFSTTNHILLLALTSLVAMAYALGV
        QF TT  +LLLALTSLVA+ YA G+
Subjt:  QFSTTNHILLLALTSLVAMAYALGV

XP_038899619.1 uncharacterized protein LOC120086877 [Benincasa hispida]3.6e-10990.22Show/hide
Query:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS
        MATKILW LLF ALFV+VFSA DSNVTDNPADKLV VLNKNRTAHKL+ALKDNPGLACLALQYIKAYQGKCG VGGPDGMKPPNSAF ETFAPNCGVVVS
Subjt:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS

Query:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
        SL+PITGRLLGCQSKYVHAPEAFSDVLM N+KSLEILY+KN+TEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
Subjt:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS

Query:  QFSTTNHILLLALTSLVAMAYALGV
        QFSTT  +LL AL SLVAMA+A  +
Subjt:  QFSTTNHILLLALTSLVAMAYALGV

TrEMBL top hitse value%identityAlignment
A0A0A0L0V6 Uncharacterized protein3.1e-10687.11Show/hide
Query:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS
        MATKILW+LLF ALFVSVFSA DSNVTDNPADKLVVVLNKNRTAHKL+ LKDNPGLACLALQYIKAYQGKC  VGGPDGMKPPNSAFAETFAPNCGVVVS
Subjt:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS

Query:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
        SL+PITGRLLGCQSKYVHAPEAFSDVLM N+KSLEILY+KN+TEVGAAVTGTDGGSPYFWCVLFSNG+ SNSFAFEGGVAKLTRPGCYSGA+DQCSG + 
Subjt:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS

Query:  QFSTTNHILLLALTSLVAMAYALGV
        QFS T+ +LL A TSLVA+ +A G+
Subjt:  QFSTTNHILLLALTSLVAMAYALGV

A0A1S3BUP6 uncharacterized protein LOC1034937016.9e-10687.22Show/hide
Query:  MATKILWFLLFFALFVSVFSATD--SNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV
        MATKILW+LLF ALFVSVFSA D  +NVTDNPADKLV VLNKNRTAHKL+ LKDNPGLACLALQYIKAYQGKC  VGGPDGMKPPNSAFAETFAPNCGVV
Subjt:  MATKILWFLLFFALFVSVFSATD--SNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV

Query:  VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA
        VSSL+PITGRLLGCQSKYVHAPEAFSDVLM N+KSLEILY+KN+TEVGAAVTGTDGGSPYFWCVLFSNGS SNSFAFEGGVAKLTRPGCYSGANDQCSGA
Subjt:  VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA

Query:  DSQFSTTNHILLLALTSLVAMAYALGV
        + QFS T+ +LL A+TSLVA+ YA G+
Subjt:  DSQFSTTNHILLLALTSLVAMAYALGV

A0A6J1CM03 uncharacterized protein LOC1110123551.8e-12298.68Show/hide
Query:  MATKILWFLLFFALFVSVFSATD--SNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV
        MATKILWFLLFFALFVSVFSATD  +NVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV
Subjt:  MATKILWFLLFFALFVSVFSATD--SNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVV

Query:  VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA
        VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA
Subjt:  VSSLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGA

Query:  DSQFSTTNHILLLALTSLVAMAYALGV
        DSQFSTTNHILLLALTSLVAMAYALGV
Subjt:  DSQFSTTNHILLLALTSLVAMAYALGV

A0A6J1F7E3 uncharacterized protein LOC1114427831.7e-10788.89Show/hide
Query:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS
        MATKILW LLF ALFVSVFSA DSNVTDNPADKLVVVLNKNRTAHKL ALKDNPGLACLALQYIKAYQGKC  VGGPDGMKPPNSAF ETFAPNCGV+VS
Subjt:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS

Query:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
        SL+PITGRLLGCQSKYVHAPEAFSDVLMLN+KSLEIL +KN+TEVGAAVTGTDGGSPYFWCVLFSNGS+SNSFAFEGGVAKLTRPGCYSGANDQCS A+S
Subjt:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS

Query:  QFSTTNHILLLALTSLVAMAYALGV
        QF TT  +LLLALTSLVA+ Y  G+
Subjt:  QFSTTNHILLLALTSLVAMAYALGV

A0A6J1IQI3 uncharacterized protein LOC1114772715.7e-10889.33Show/hide
Query:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS
        MATKILW LLF ALFVSVFSA DSNVTDNPADKLVVVLNKNRTAHKL ALKDNPGLACLALQYIKAYQGKC  VGGPDGMKPPNSAF ETFAPNCGV+VS
Subjt:  MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVS

Query:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS
        SL+PITGRLLGCQSKYVHAPEAFSDVLMLN+KSLEIL +KN+TEVGAAVTGTDGGSPYFWCVLFSNGS+SNSFAFEGGVAKLTRPGCYSGANDQCS A+S
Subjt:  SLSPITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADS

Query:  QFSTTNHILLLALTSLVAMAYALGV
        QF TT  +LLLALTSLVA+ YA G+
Subjt:  QFSTTNHILLLALTSLVAMAYALGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02180.1 ferredoxin-related2.2e-3538.36Show/hide
Query:  ILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVSSLSP
        IL  +L F    SV ++  S +  N A ++V +LN+NRTA KL  L ++PGL C+ALQY++  +G C  V      + P   F + FAPNCGV + +   
Subjt:  ILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVSSLSP

Query:  ITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFE-GGVAKLTRPGCYSGANDQCSGADSQFS
        ITG +LGC SKY     AFSD+L  +  +L +L +++HTEVG  +     G+ +FWC+LFS+G  ++SF  E  G     R GCYSG+   CS      S
Subjt:  ITGRLLGCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFE-GGVAKLTRPGCYSGANDQCSGADSQFS

Query:  TTNHILLLALTSLVAMAYA
          + I +  L S + + ++
Subjt:  TTNHILLLALTSLVAMAYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAAGATTCTGTGGTTTCTCTTGTTTTTCGCCCTCTTCGTCTCTGTGTTTTCTGCCACAGACTCAAATGTGACTGATAATCCTGCTGATAAACTAGTTGTTGT
GCTTAACAAGAACAGAACTGCACACAAATTGGCTGCTCTTAAAGACAATCCTGGCCTGGCCTGCCTTGCTCTTCAGTATATCAAGGCGTACCAAGGCAAATGCGGAGAGG
TCGGAGGCCCCGATGGAATGAAGCCTCCGAATTCTGCGTTTGCTGAAACGTTTGCTCCCAACTGCGGAGTTGTTGTCTCGTCTCTTTCGCCGATCACGGGGCGGCTGCTT
GGTTGCCAGTCCAAATATGTCCATGCTCCCGAAGCGTTCTCGGATGTTTTGATGCTGAATGACAAGAGCTTGGAGATTCTATACCACAAGAATCACACGGAAGTTGGAGC
TGCTGTGACTGGCACTGATGGAGGTTCTCCTTACTTTTGGTGTGTGTTGTTCAGCAATGGCAGCATCTCTAACAGCTTTGCTTTCGAGGGAGGAGTCGCGAAGCTGACAC
GCCCTGGATGCTACAGTGGAGCTAACGACCAATGCAGCGGAGCCGATAGCCAGTTCTCGACCACCAACCATATCTTGCTATTAGCCTTGACATCTTTGGTTGCCATGGCA
TATGCCTTGGGTGTA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCAAGATTCTGTGGTTTCTCTTGTTTTTCGCCCTCTTCGTCTCTGTGTTTTCTGCCACAGACTCAAATGTGACTGATAATCCTGCTGATAAACTAGTTGTTGT
GCTTAACAAGAACAGAACTGCACACAAATTGGCTGCTCTTAAAGACAATCCTGGCCTGGCCTGCCTTGCTCTTCAGTATATCAAGGCGTACCAAGGCAAATGCGGAGAGG
TCGGAGGCCCCGATGGAATGAAGCCTCCGAATTCTGCGTTTGCTGAAACGTTTGCTCCCAACTGCGGAGTTGTTGTCTCGTCTCTTTCGCCGATCACGGGGCGGCTGCTT
GGTTGCCAGTCCAAATATGTCCATGCTCCCGAAGCGTTCTCGGATGTTTTGATGCTGAATGACAAGAGCTTGGAGATTCTATACCACAAGAATCACACGGAAGTTGGAGC
TGCTGTGACTGGCACTGATGGAGGTTCTCCTTACTTTTGGTGTGTGTTGTTCAGCAATGGCAGCATCTCTAACAGCTTTGCTTTCGAGGGAGGAGTCGCGAAGCTGACAC
GCCCTGGATGCTACAGTGGAGCTAACGACCAATGCAGCGGAGCCGATAGCCAGTTCTCGACCACCAACCATATCTTGCTATTAGCCTTGACATCTTTGGTTGCCATGGCA
TATGCCTTGGGTGTA
Protein sequenceShow/hide protein sequence
MATKILWFLLFFALFVSVFSATDSNVTDNPADKLVVVLNKNRTAHKLAALKDNPGLACLALQYIKAYQGKCGEVGGPDGMKPPNSAFAETFAPNCGVVVSSLSPITGRLL
GCQSKYVHAPEAFSDVLMLNDKSLEILYHKNHTEVGAAVTGTDGGSPYFWCVLFSNGSISNSFAFEGGVAKLTRPGCYSGANDQCSGADSQFSTTNHILLLALTSLVAMA
YALGV