; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008622 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008622
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description17.3 kDa class II heat shock protein-like
Genome locationscaffold4:2677315..2677650
RNA-Seq ExpressionMS008622
SyntenyMS008622
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0009408 - response to heat (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0042542 - response to hydrogen peroxide (biological process)
GO:0051259 - protein complex oligomerization (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043621 - protein self-association (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR031107 - Small heat shock protein HSP20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADU55791.1 HSP17.4 [Citrullus lanatus]2.8e-4993.75Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREE+KEG   AKYVRMERRVGK MRKFVLPENANTDAISAVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

XP_022135183.1 LOW QUALITY PROTEIN: 17.9 kDa class II heat shock protein-like [Momordica charantia]2.8e-54100Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

XP_022936723.1 17.3 kDa class II heat shock protein-like [Cucurbita moschata]4.7e-4991.96Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVFVVDMPGLKVGDIKVQVE+DNVLL+SGERKREE+KEG   AKYVRMERRVGKFMRKFVLPENANTDAI+AVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

XP_022941229.1 17.1 kDa class II heat shock protein-like [Cucurbita moschata]1.0e-4892.86Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREE+KEG   AKYVRMERRVGK MRKFVLPENAN DAISAVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPK+VEVKVN
Subjt:  PKKPKIVEVKVN

XP_023535605.1 17.9 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo]4.7e-4991.96Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVFVVDMPGLKVGDIKVQVE+DNVLL+SGERKREE+KEG   AKYVRMERRVGKFMRKFVLPENANTDAI+AVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

TrEMBL top hitse value%identityAlignment
A0A6J1C436 LOW QUALITY PROTEIN: 17.9 kDa class II heat shock protein-like1.4e-54100Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

A0A6J1FE17 17.3 kDa class II heat shock protein-like2.3e-4991.96Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVFVVDMPGLKVGDIKVQVE+DNVLL+SGERKREE+KEG   AKYVRMERRVGKFMRKFVLPENANTDAI+AVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

A0A6J1FMP1 17.1 kDa class II heat shock protein-like5.1e-4992.86Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREE+KEG   AKYVRMERRVGK MRKFVLPENAN DAISAVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPK+VEVKVN
Subjt:  PKKPKIVEVKVN

A0A6J1ILE9 17.3 kDa class II heat shock protein-like2.3e-4991.96Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVFVVDMPGLKVGDIKVQVE+DNVLL+SGERKREE+KEG   AKYVRMERRVGKFMRKFVLPENANTDAI+AVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

H6TB44 HSP17.41.3e-4993.75Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREE+KEG   AKYVRMERRVGK MRKFVLPENANTDAISAVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKVN
        PKKPKIVEVKVN
Subjt:  PKKPKIVEVKVN

SwissProt top hitse value%identityAlignment
O82013 17.3 kDa class II heat shock protein4.9e-4988.29Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVFVVDMPGLK GDIKVQVE+DNVLLISGERKREE+KEG   AK++RMERRVGKFMRKF LPENANTDAISAVCQDGVLTVTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKV
        PKKPK +EVKV
Subjt:  PKKPKIVEVKV

P05477 17.9 kDa class II heat shock protein1.7e-4682.88Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KEYPNSYVF +DMPGLK GDIKVQVEDDN+LLI GERKR+E+KEG   AKY+RMERRVGK MRKFVLPENANTDAISAVCQDGVL+VTVQKLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKV
        PKKP+ ++VKV
Subjt:  PKKPKIVEVKV

P19242 17.1 kDa class II heat shock protein1.1e-4378.38Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KE+PNSYVF+VDMPG+K GDIKVQVED+NVLLISGERKREE+KEG    KY++MERR+GK MRKFVLPENAN +AISA+ QDGVLTVTV KLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKV
        PKKPK ++VKV
Subjt:  PKKPKIVEVKV

P46516 17.9 kDa class II heat shock protein3.1e-4377.48Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+KE PNSYVF+VDMPGLK GDIKVQVE DNVL+ISG+R REE+KEG    KYVRMERR+GKFM+KF LPE+ANTD ISA+CQDGVLTVTV+KLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKV
        PKKPK ++V+V
Subjt:  PKKPKIVEVKV

Q01544 17.2 kDa class II heat shock protein8.9e-4377.68Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPP
        PAD+KEYPNSYVF++DMPGLK GDIKVQV+ DNVL ISGERKRE E+KEG   AKYVRMERRVGK MRKFVLPENAN + I+AVCQDGVLTVTV+ +PPP
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPP

Query:  QPKKPKIVEVKV
        +PKKP+ +EVK+
Subjt:  QPKKPKIVEVKV

Arabidopsis top hitse value%identityAlignment
AT1G54050.1 HSP20-like chaperones superfamily protein1.2e-2146.09Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKREEDKEGANAAKYVRMERRVGK-FMRKFVLPENANTDAISAVCQDGVLTVTVQKLP
        P DI E P  Y+F +D+PG+   DI+V VE++  L+I  +G+RKR++D E    +KY+R+ERR+ +  ++KF LPE+A+  +++A  Q+GVLTV ++KL 
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLI--SGERKREEDKEGANAAKYVRMERRVGK-FMRKFVLPENANTDAISAVCQDGVLTVTVQKLP

Query:  PPQPKKPKIVEVKVN
        PPQP KPK V++ V+
Subjt:  PPQPKKPKIVEVKVN

AT4G10250.1 HSP20-like chaperones superfamily protein1.9e-1942.06Show/hide
Query:  DIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPK
        D KE    +  ++D+PGLK  ++K++VE++ VL +SGERKREE+K+G    ++ R+ER  GKF R+F LP+N + +++ A  ++GVLT+ + KL P + K
Subjt:  DIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPK

Query:  KPKIVEV
         P++V +
Subjt:  KPKIVEV

AT5G12020.1 17.6 kDa class II heat shock protein1.4e-3870.54Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPP
        PAD+ E+PN+Y FVVDMPG+K  +IKVQVE+DNVL++SGER+RE ++ EG    KYVRMERR+GKFMRKF LPENA+ D ISAVC DGVL VTVQKLPPP
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKRE-EDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPP

Query:  QPKKPKIVEVKV
        +PKKPK ++V+V
Subjt:  QPKKPKIVEVKV

AT5G12030.1 heat shock protein 17.6A1.0e-3359.46Show/hide
Query:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ
        PAD+ E+P++YVF VDMPG+K  +I+VQ+E++NVL++SG  KR+ D +     K+VRMERR+GKFMRKF LP+NA+ + ISA C DGVL VT+ KLPPP+
Subjt:  PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQ

Query:  PKKPKIVEVKV
        PKKPK ++V+V
Subjt:  PKKPKIVEVKV

AT5G59720.1 heat shock protein 18.21.3e-2047.27Show/hide
Query:  DIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPK
        D KE P ++VF  D+PGLK  ++KV+VED NVL ISGER +E +++     K+ R+ER  GKFMR+F LPENA  + + A  ++GVLTV V K P    K
Subjt:  DIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPK

Query:  KPKIVEVKVN
        KP++  + ++
Subjt:  KPKIVEVKVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGCCGACATCAAGGAGTATCCTAACTCCTACGTCTTCGTCGTCGACATGCCGGGGCTGAAGGTCGGCGACATCAAGGTCCAGGTTGAGGATGACAATGTGCTGCTCAT
AAGTGGGGAGAGGAAGAGGGAGGAGGACAAAGAGGGGGCCAATGCCGCCAAGTACGTGAGGATGGAAAGGAGGGTTGGTAAGTTTATGAGGAAATTTGTGCTGCCGGAAA
ATGCCAACACCGATGCCATCTCCGCCGTGTGCCAGGATGGTGTGCTCACTGTCACTGTGCAGAAGTTGCCACCACCTCAGCCCAAGAAGCCCAAGATCGTTGAAGTCAAG
GTCAAT
mRNA sequenceShow/hide mRNA sequence
CCAGCCGACATCAAGGAGTATCCTAACTCCTACGTCTTCGTCGTCGACATGCCGGGGCTGAAGGTCGGCGACATCAAGGTCCAGGTTGAGGATGACAATGTGCTGCTCAT
AAGTGGGGAGAGGAAGAGGGAGGAGGACAAAGAGGGGGCCAATGCCGCCAAGTACGTGAGGATGGAAAGGAGGGTTGGTAAGTTTATGAGGAAATTTGTGCTGCCGGAAA
ATGCCAACACCGATGCCATCTCCGCCGTGTGCCAGGATGGTGTGCTCACTGTCACTGTGCAGAAGTTGCCACCACCTCAGCCCAAGAAGCCCAAGATCGTTGAAGTCAAG
GTCAAT
Protein sequenceShow/hide protein sequence
PADIKEYPNSYVFVVDMPGLKVGDIKVQVEDDNVLLISGERKREEDKEGANAAKYVRMERRVGKFMRKFVLPENANTDAISAVCQDGVLTVTVQKLPPPQPKKPKIVEVK
VN