; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008627 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008627
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRRM domain-containing protein
Genome locationscaffold4:2720162..2721297
RNA-Seq ExpressionMS008627
SyntenyMS008627
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138874.1 uncharacterized protein LOC111009933 [Momordica charantia]1.0e-9678.05Show/hide
Query:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
        GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGD+RNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
Subjt:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL

Query:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLF
        LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVG                                                   LF
Subjt:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLF

Query:  RPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        RPFIGYKDIRVVHKEPRRSGD AAVLCFVEFVEAKCA AAMAALQG
Subjt:  RPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

XP_022982403.1 RNA-binding protein 2-like [Cucurbita maxima]1.0e-7261.94Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  S YSEAPPL TSYPN+ SID W  PPDYLQK+T+SSG G YGY D+G +RNYPEPVIGGVTSGV+A G TSPF D+ A QR +IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL
        L+ MAD GHE+A+SLGLRN E VPIS  ESNILFVDGLPTDCTRREVG                                                   L
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL

Query:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        FRPFIGYKDIRVVHKEPRR GD A VLCFVEF+EA+ +RAAM ALQG
Subjt:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

XP_038896812.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]1.1e-7464.23Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  STYSEAPPL TSYPN+ SIDQWH  PDYLQKDTNS G GAYGY D+G + NYPEPVIG V SG +AKGYTSPFEDSLASQRQ+IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL
        ++GMAD  HERA+SL LR AE  P S+RESNILFVDGLPTDCTRREVG                                                   L
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL

Query:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ
        FRPFIGYKDIRVVHKEPRRSGD A VLCFVEF+EA+ AR AM ALQ
Subjt:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ

XP_038896813.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]1.7e-7564.37Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  STYSEAPPL TSYPN+ SIDQWH  PDYLQKDTNS G GAYGY D+G + NYPEPVIG V SG +AKGYTSPFEDSLASQRQ+IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL
        ++GMAD  HERA+SL LR AE  P S+RESNILFVDGLPTDCTRREVG                                                   L
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL

Query:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        FRPFIGYKDIRVVHKEPRRSGD A VLCFVEF+EA+ AR AM ALQG
Subjt:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

XP_038896814.1 nuclear speckle RNA-binding protein B-like isoform X3 [Benincasa hispida]2.5e-7464.08Show/hide
Query:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
        GSVARS  STYSEAPPL TSYPN+ SIDQWH  PDYLQKDTNS G GAYGY D+G + NYPEPVIG V SG +AKGYTSPFEDSLASQRQ+IAVGSSPG+
Subjt:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL

Query:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLF
        +GMAD  HERA+SL LR AE  P S+RESNILFVDGLPTDCTRREVG                                                   LF
Subjt:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLF

Query:  RPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ
        RPFIGYKDIRVVHKEPRRSGD A VLCFVEF+EA+ AR AM ALQ
Subjt:  RPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ

TrEMBL top hitse value%identityAlignment
A0A1S3BU06 RNA-binding protein 2-like isoform X11.9e-7262.65Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHT-PPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP
        AGSVARS  STYSEAPPL+ SYPN+ SIDQWHT PPDY+ +DTNS G GAYGY D+G    YPEPVIGGVTSGV+A GY SPF DSLASQRQ+IAVGSSP
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHT-PPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP

Query:  GLLGMADMGHERASSLG-LRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFK
        G++G AD+GHERA+SL  +R AEC P S RESNILFVDGLPTDCTRREVG                                                  
Subjt:  GLLGMADMGHERASSLG-LRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFK

Query:  DLFRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
         LFRPF+GYKDIRVVHKEPRRSGD A VLCFVEFVEAK ++AAM ALQG
Subjt:  DLFRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

A0A5D3D938 RNA-binding protein 2-like isoform X11.9e-7262.65Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHT-PPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP
        AGSVARS  STYSEAPPL+ SYPN+ SIDQWHT PPDY+ +DTNS G GAYGY D+G    YPEPVIGGVTSGV+A GY SPF DSLASQRQ+IAVGSSP
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHT-PPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSP

Query:  GLLGMADMGHERASSLG-LRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFK
        G++G AD+GHERA+SL  +R AEC P S RESNILFVDGLPTDCTRREVG                                                  
Subjt:  GLLGMADMGHERASSLG-LRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFK

Query:  DLFRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
         LFRPF+GYKDIRVVHKEPRRSGD A VLCFVEFVEAK ++AAM ALQG
Subjt:  DLFRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

A0A6J1CBB3 uncharacterized protein LOC1110099335.0e-9778.05Show/hide
Query:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
        GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGD+RNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL
Subjt:  GSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGL

Query:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLF
        LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVG                                                   LF
Subjt:  LGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLF

Query:  RPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        RPFIGYKDIRVVHKEPRRSGD AAVLCFVEFVEAKCA AAMAALQG
Subjt:  RPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

A0A6J1FN25 RNA-binding protein 2-like2.5e-7261.54Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  S YSEAPPL TSYPN+ SID W  PPDYL K+T+SSG G YGY D+G +RNYPEPVIGGVTSGV+A G TSPF D+ A QR +IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL
        L+ MAD GHE+A+SLGLRN E VPIS +ESNILFVDGLPTDCTRREVG                                                   L
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL

Query:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        FRPFIGYKDIRVVHKEPRR GD A VLCFVEF+EA+ +RAAM ALQG
Subjt:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

A0A6J1J4R2 RNA-binding protein 2-like5.0e-7361.94Show/hide
Query:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG
        AGSVARS  S YSEAPPL TSYPN+ SID W  PPDYLQK+T+SSG G YGY D+G +RNYPEPVIGGVTSGV+A G TSPF D+ A QR +IAVGSSPG
Subjt:  AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPG

Query:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL
        L+ MAD GHE+A+SLGLRN E VPIS  ESNILFVDGLPTDCTRREVG                                                   L
Subjt:  LLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDL

Query:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        FRPFIGYKDIRVVHKEPRR GD A VLCFVEF+EA+ +RAAM ALQG
Subjt:  FRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.1e-0827.66Show/hide
Query:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIG
        +G +    +G RN     + +  SN L+V+GLP++C+RREV  I                                                  FRPF+G
Subjt:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIG

Query:  YKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        Y+++R+V K+ +    +  VLCFV+F    CA  A++ALQG
Subjt:  YKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

F4HWF9 Nuclear speckle RNA-binding protein B7.6e-1028.37Show/hide
Query:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFI
        DMG  +  S+G    E  P+    SN L+V+GLP++C+RREV  I                                                  FRPF+
Subjt:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFI

Query:  GYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ
        GY+++R+V ++ +    +  VLCFV+F  + CA  A++ALQ
Subjt:  GYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ

G7ID19 RNA-binding protein 21.3e-0929.13Show/hide
Query:  ECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIGYKDIRVVHKEPRRS
        E +P+    S+ L+V+GLP+D T+REV  I                                                  FRPF+GY+++R+V KE +  
Subjt:  ECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIGYKDIRVVHKEPRRS

Query:  GDNAAVLCFVEFVEAKCARAAMAALQG
        G +  +LCFV+F    CA  A++ALQG
Subjt:  GDNAAVLCFVEFVEAKCARAAMAALQG

Q6JB11 Protein MATERNALLY EXPRESSED GENE 59.3e-0827.7Show/hide
Query:  GLLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKD
        G++GM   G      +G       P+    S+ L+++GLP +CTRREV  I                                                 
Subjt:  GLLGMADMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKD

Query:  LFRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
         FRPF+G++++R+V+KE R  G +  VLCFV+F     A  A+ ALQG
Subjt:  LFRPFIGYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

Q8H0P8 RNA-binding protein 11.4e-0831.36Show/hide
Query:  SNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIGYKDIRVVHKEPRRSGDNAAVLCF
        S  L+++GLP+DCTRREV  I                                                  FRPF+GY+++R+V KE +  GD   +LCF
Subjt:  SNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIGYKDIRVVHKEPRRSGDNAAVLCF

Query:  VEFVEAKCARAAMAALQG
        V+F    CA  A++ALQG
Subjt:  VEFVEAKCARAAMAALQG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding5.4e-1128.37Show/hide
Query:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFI
        DMG  +  S+G    E  P+    SN L+V+GLP++C+RREV  I                                                  FRPF+
Subjt:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFI

Query:  GYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ
        GY+++R+V ++ +    +  VLCFV+F  + CA  A++ALQ
Subjt:  GYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ

AT1G21320.2 nucleotide binding;nucleic acid binding5.4e-1128.37Show/hide
Query:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFI
        DMG  +  S+G    E  P+    SN L+V+GLP++C+RREV  I                                                  FRPF+
Subjt:  DMGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFI

Query:  GYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ
        GY+++R+V ++ +    +  VLCFV+F  + CA  A++ALQ
Subjt:  GYKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQ

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-1027.66Show/hide
Query:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIG
        +G +    +G RN     + +  SN L+V+GLP++C+RREV  I                                                  FRPF+G
Subjt:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIG

Query:  YKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        Y+++R+V K+ +    +  VLCFV+F    CA  A++ALQG
Subjt:  YKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-1027.66Show/hide
Query:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIG
        +G +    +G RN     + +  SN L+V+GLP++C+RREV  I                                                  FRPF+G
Subjt:  MGHERASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIG

Query:  YKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG
        Y+++R+V K+ +    +  VLCFV+F    CA  A++ALQG
Subjt:  YKDIRVVHKEPRRSGDNAAVLCFVEFVEAKCARAAMAALQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAGGAAGTGTAGCAAGGTCTAGCCATTCAACCTACTCTGAAGCACCTCCTTTGTCGACATCTTACCCTAATGCAGCCTCTATCGATCAGTGGCACACCCCTCCGGATTA
TTTGCAGAAAGATACAAATTCATCAGGAACTGGGGCTTATGGGTATGCTGACATAGGGGACGTTAGAAATTATCCAGAACCAGTGATTGGCGGTGTGACATCTGGAGTGA
CTGCAAAGGGATACACATCTCCTTTTGAAGATTCATTAGCAAGTCAAAGACAAGAAATTGCAGTGGGCAGCAGTCCAGGGCTGTTGGGTATGGCTGACATGGGTCATGAA
AGGGCCAGTTCTCTCGGTCTCAGGAATGCTGAATGTGTTCCAATCTCAACTCGGGAATCGAATATTCTTTTTGTCGATGGACTTCCTACAGATTGTACTAGAAGAGAAGT
AGGCCGTATCCTTGCACCCGATGTCCTTGCTTTTGTTATTATTTATCCTGTCTTACCAACATTATCTACCTCCACTGCTTTAAATTGCTTATGCTGCAGGCAACAGAACC
ATTGTCATGTAGCCTTGTTTTGTCACATCTTAACTTCGTTTAAAGATCTTTTCCGCCCCTTCATTGGCTATAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGT
GGAGATAATGCTGCGGTATTATGCTTTGTAGAGTTCGTTGAAGCAAAGTGTGCGCGGGCTGCTATGGCAGCTCTTCAAGGTATTATA
mRNA sequenceShow/hide mRNA sequence
GCAGGAAGTGTAGCAAGGTCTAGCCATTCAACCTACTCTGAAGCACCTCCTTTGTCGACATCTTACCCTAATGCAGCCTCTATCGATCAGTGGCACACCCCTCCGGATTA
TTTGCAGAAAGATACAAATTCATCAGGAACTGGGGCTTATGGGTATGCTGACATAGGGGACGTTAGAAATTATCCAGAACCAGTGATTGGCGGTGTGACATCTGGAGTGA
CTGCAAAGGGATACACATCTCCTTTTGAAGATTCATTAGCAAGTCAAAGACAAGAAATTGCAGTGGGCAGCAGTCCAGGGCTGTTGGGTATGGCTGACATGGGTCATGAA
AGGGCCAGTTCTCTCGGTCTCAGGAATGCTGAATGTGTTCCAATCTCAACTCGGGAATCGAATATTCTTTTTGTCGATGGACTTCCTACAGATTGTACTAGAAGAGAAGT
AGGCCGTATCCTTGCACCCGATGTCCTTGCTTTTGTTATTATTTATCCTGTCTTACCAACATTATCTACCTCCACTGCTTTAAATTGCTTATGCTGCAGGCAACAGAACC
ATTGTCATGTAGCCTTGTTTTGTCACATCTTAACTTCGTTTAAAGATCTTTTCCGCCCCTTCATTGGCTATAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGT
GGAGATAATGCTGCGGTATTATGCTTTGTAGAGTTCGTTGAAGCAAAGTGTGCGCGGGCTGCTATGGCAGCTCTTCAAGGTATTATA
Protein sequenceShow/hide protein sequence
AGSVARSSHSTYSEAPPLSTSYPNAASIDQWHTPPDYLQKDTNSSGTGAYGYADIGDVRNYPEPVIGGVTSGVTAKGYTSPFEDSLASQRQEIAVGSSPGLLGMADMGHE
RASSLGLRNAECVPISTRESNILFVDGLPTDCTRREVGRILAPDVLAFVIIYPVLPTLSTSTALNCLCCRQQNHCHVALFCHILTSFKDLFRPFIGYKDIRVVHKEPRRS
GDNAAVLCFVEFVEAKCARAAMAALQGII