; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008654 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008654
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
Genome locationscaffold4:2877141..2880949
RNA-Seq ExpressionMS008654
SyntenyMS008654
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0015990 - electron transport coupled proton transport (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006137 - NADH:ubiquinone oxidoreductase-like, 20kDa subunit
IPR006138 - NADH-ubiquinone oxidoreductase, 20 Kd subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024337.1 hypothetical protein SDJN02_13151 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-11294.84Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARGA  SLHTTAPALSS+STASP  YARPPPPS SSPTGLPKAAE+VISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFLHWWTK
Subjt:  INRRKDFLHWWTK

XP_004141310.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucumis sativus]5.1e-11396.24Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARGAL SLHTTAPALSS+STASP PYARP PPSASSPTGLPKAAE+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFL WWTK
Subjt:  INRRKDFLHWWTK

XP_022137084.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Momordica charantia]1.4e-11899.53Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYA+PPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFLHWWTK
Subjt:  INRRKDFLHWWTK

XP_022936396.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita moschata]1.8e-11395.31Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARGA  SLHTTAPALSS+STASP PYARPPPPS SSPTGLPKAAE+VISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFLHWWTK
Subjt:  INRRKDFLHWWTK

XP_022977107.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita maxima]5.1e-11394.84Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARG   SLHTTAPALSS+STASP PYARPPPPS SSPTGLPKAAE+VISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFLHWWTK
Subjt:  INRRKDFLHWWTK

TrEMBL top hitse value%identityAlignment
A0A0A0L3Y8 Oxidored_q6 domain-containing protein2.5e-11396.24Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARGAL SLHTTAPALSS+STASP PYARP PPSASSPTGLPKAAE+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFL WWTK
Subjt:  INRRKDFLHWWTK

A0A5D3D968 NADH dehydrogenase (Ubiquinone) iron-sulfur protein 72.8e-11295.31Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARGAL  LHTT PALSS+STASP PYARP PPSASSPTGLPKAAE+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFL WWTK
Subjt:  INRRKDFLHWWTK

A0A6J1C671 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial6.8e-11999.53Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYA+PPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFLHWWTK
Subjt:  INRRKDFLHWWTK

A0A6J1F7C6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial8.6e-11495.31Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARGA  SLHTTAPALSS+STASP PYARPPPPS SSPTGLPKAAE+VISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFLHWWTK
Subjt:  INRRKDFLHWWTK

A0A6J1IHI6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial2.5e-11394.84Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA VSRAS+RIPHLLAARG   SLHTTAPALSS+STASP PYARPPPPS SSPTGLPKAAE+VISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKDFLHWWTK
Subjt:  INRRKDFLHWWTK

SwissProt top hitse value%identityAlignment
O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit6.6e-7984.97Show/hide
Query:  EFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYY
        EF++SK+D+L+NWAR+GS+WPMTFGLACCAVEMMH+ A+RYDLDRFG+IFRPSPRQSD MIVAGTLTNKMAPALRKVYDQM EPRWV+SMGSCANGGGYY
Subjt:  EFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYY

Query:  HYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK
        HYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKKI R +  L+W  K
Subjt:  HYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK

P42026 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial1.2e-7567.44Show/hide
Query:  ASSRIPH-LLAARGALSS------LHTTAPALSSASTASPAPYARPPPPSASSPTGLPKA-AEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGA
        A+ R+ H +LA R  + +      +H++  A S +ST      AR   P    P  LP +  E+V++K+DDL+NWARR S+WPMTFGLACCAVEMMH  A
Subjt:  ASSRIPH-LLAARGALSS------LHTTAPALSSASTASPAPYARPPPPSASSPTGLPKA-AEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGA

Query:  ARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ
         RYD+DRFGV+FR SPRQSD MIVAGTLTNKMAPALRKVYDQMPEPR+V+SMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ
Subjt:  ARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQ

Query:  KKINRRKDFLHWWTK
        KKI R K    W+ +
Subjt:  KKINRRKDFLHWWTK

P42027 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial1.5e-9982.95Show/hide
Query:  MAVVSR-ASSRIPHLLAAR--GALSSLHTTAPALSSASTASPAPYARPPPPSASS-PTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHT
        MA+++R  ++R+P +L +    A+S LHT+ PALS A+T  P  Y RP PPS S+ P GL K AEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHT
Subjt:  MAVVSR-ASSRIPHLLAAR--GALSSLHTTAPALSSASTASPAPYARPPPPSASS-PTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHT

Query:  GAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQ
        GAARYDLDRFG+IFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG+LQ
Subjt:  GAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQ

Query:  LQKKINRRKDFLHWWTK
        LQKKINRRKDFLHWW K
Subjt:  LQKKINRRKDFLHWWTK

Q42577 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial1.3e-9881.82Show/hide
Query:  MAVVSR-ASSRIPHLL-----AARGALSSLHTTAPALSSASTASPAPYARPPPPSAS-SPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEM
        MA+++R  ++R+P LL      A  ++S LHT+ PALS ++  SP  Y RP PPS S  P GL KAAEFVISKVDDLMNWAR GSIWPMTFGLACCAVEM
Subjt:  MAVVSR-ASSRIPHLL-----AARGALSSLHTTAPALSSASTASPAPYARPPPPSAS-SPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEM

Query:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG
        MHTGAARYDLDRFG+IFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG
Subjt:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG

Query:  ILQLQKKINRRKDFLHWWTK
        +LQLQKKINRRKDFLHWW K
Subjt:  ILQLQKKINRRKDFLHWWTK

Q43844 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial1.4e-9276.53Show/hide
Query:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR
        MA+++R +  +          +++HTT P+LS    +SPA      PPS ++P G+ K AE+VISKVDDLMNWARRGSIWPMTFGLACCAVEMMH GAAR
Subjt:  MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAAR

Query:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
        YD DRFG+IFRPSPRQSD MIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK
Subjt:  YDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKK

Query:  INRRKDFLHWWTK
        INRRKD L WWT+
Subjt:  INRRKDFLHWWTK

Arabidopsis top hitse value%identityAlignment
AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial9.1e-10081.82Show/hide
Query:  MAVVSR-ASSRIPHLL-----AARGALSSLHTTAPALSSASTASPAPYARPPPPSAS-SPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEM
        MA+++R  ++R+P LL      A  ++S LHT+ PALS ++  SP  Y RP PPS S  P GL KAAEFVISKVDDLMNWAR GSIWPMTFGLACCAVEM
Subjt:  MAVVSR-ASSRIPHLL-----AARGALSSLHTTAPALSSASTASPAPYARPPPPSAS-SPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEM

Query:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG
        MHTGAARYDLDRFG+IFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG
Subjt:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYG

Query:  ILQLQKKINRRKDFLHWWTK
        +LQLQKKINRRKDFLHWW K
Subjt:  ILQLQKKINRRKDFLHWWTK

ATCG00430.1 photosystem II reaction center protein G1.9e-4148.59Show/hide
Query:  VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY
        + + ++DL NW+R  S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D ++ AGT+T KMAP+L ++Y+QMPEP++VI+MG+C   GG +  
Subjt:  VISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY

Query:  -SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINR
         SYS VRG D+++PVD+Y+PGCPP  EA++  I +L+KKI R
Subjt:  -SYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGTAAGCCGAGCTTCCAGCCGAATCCCTCATCTGCTTGCCGCTCGGGGAGCTCTCTCTTCTCTTCATACCACAGCCCCCGCTCTGTCTTCTGCCTCGACCGC
CTCTCCGGCGCCCTATGCGAGGCCGCCGCCGCCTTCGGCTTCGTCCCCCACGGGGCTTCCGAAGGCAGCGGAGTTTGTGATCTCCAAGGTCGACGACCTCATGAACTGGG
CTCGCCGTGGCTCTATCTGGCCCATGACGTTTGGCCTTGCTTGCTGCGCCGTCGAAATGATGCACACCGGTGCTGCCCGCTATGACCTTGATCGGTTCGGAGTTATCTTC
CGTCCCAGCCCTAGGCAATCTGATTGTATGATTGTGGCCGGCACCCTCACTAACAAGATGGCCCCAGCTCTTCGCAAGGTTTATGACCAAATGCCAGAACCGCGGTGGGT
TATATCCATGGGAAGCTGCGCAAATGGTGGTGGATACTATCACTACTCGTACTCCGTCGTTCGGGGTTGTGATCGGATAGTCCCTGTTGATATCTACGTGCCTGGTTGCC
CTCCTACTGCTGAGGCATTGCTTTACGGAATTCTTCAGCTGCAGAAGAAGATCAACAGACGCAAGGATTTCCTCCATTGGTGGACCAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTCGTAAGCCGAGCTTCCAGCCGAATCCCTCATCTGCTTGCCGCTCGGGGAGCTCTCTCTTCTCTTCATACCACAGCCCCCGCTCTGTCTTCTGCCTCGACCGC
CTCTCCGGCGCCCTATGCGAGGCCGCCGCCGCCTTCGGCTTCGTCCCCCACGGGGCTTCCGAAGGCAGCGGAGTTTGTGATCTCCAAGGTCGACGACCTCATGAACTGGG
CTCGCCGTGGCTCTATCTGGCCCATGACGTTTGGCCTTGCTTGCTGCGCCGTCGAAATGATGCACACCGGTGCTGCCCGCTATGACCTTGATCGGTTCGGAGTTATCTTC
CGTCCCAGCCCTAGGCAATCTGATTGTATGATTGTGGCCGGCACCCTCACTAACAAGATGGCCCCAGCTCTTCGCAAGGTTTATGACCAAATGCCAGAACCGCGGTGGGT
TATATCCATGGGAAGCTGCGCAAATGGTGGTGGATACTATCACTACTCGTACTCCGTCGTTCGGGGTTGTGATCGGATAGTCCCTGTTGATATCTACGTGCCTGGTTGCC
CTCCTACTGCTGAGGCATTGCTTTACGGAATTCTTCAGCTGCAGAAGAAGATCAACAGACGCAAGGATTTCCTCCATTGGTGGACCAAG
Protein sequenceShow/hide protein sequence
MAVVSRASSRIPHLLAARGALSSLHTTAPALSSASTASPAPYARPPPPSASSPTGLPKAAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIF
RPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK