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MS008661 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008661
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCRG16
Genome locationscaffold4:2902639..2902833
RNA-Seq ExpressionMS008661
SyntenyMS008661
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1276.92Show/hide
Query:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
        MAAVS+ SF+A+VAVL  V S+A AQS E PAPAPASPATSVVPSLS  CV AF ALVFGSALKA
Subjt:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.9e-0557.81Show/hide
Query:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        MA VS+AS +A++A++ AV S+AA    E PAP+PASPATS+ PS    CVAAF AL FGS L+
Subjt:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1276.92Show/hide
Query:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
        MAAVS+ SF+A+VAVL  V S+A AQS E PAPAPASPATSVVPSLS  CV AF ALVFGSALKA
Subjt:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]5.9e-1275.38Show/hide
Query:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
        MAAVS+ SF+A+VAVL AV S+A AQS E PAP PASPA SVVPSLSF CV AF AL+FGSALKA
Subjt:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]6.0e-0453.12Show/hide
Query:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        MAA+S+ S +A++A++ A+ S+AA    E PAP+PASPATS+ PS    C+AAF AL FGS L+
Subjt:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein2.9e-0453.12Show/hide
Query:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK
        MAA+S+ S +A++A++ A+ S+AA    E PAP+PASPATS+ PS    C+AAF AL FGS L+
Subjt:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALK

Q96504 CRG162.9e-1275.38Show/hide
Query:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA
        MAAVS+ SF+A+VAVL AV S+A AQS E PAP PASPA SVVPSLSF CV AF AL+FGSALKA
Subjt:  MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTCTCCAGGGCTTCTTTCATCGCCATTGTGGCCGTTCTGCTCGCCGTGTTCTCCATCGCCGCCGCTCAATCCGTCGAGCCTCCCGCTCCCGCGCCAGCTTC
TCCGGCCACCTCTGTCGTACCGTCGTTGAGCTTCGGTTGCGTCGCTGCTTTCGCCGCTCTCGTCTTCGGATCTGCCCTTAAAGCT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCGTCTCCAGGGCTTCTTTCATCGCCATTGTGGCCGTTCTGCTCGCCGTGTTCTCCATCGCCGCCGCTCAATCCGTCGAGCCTCCCGCTCCCGCGCCAGCTTC
TCCGGCCACCTCTGTCGTACCGTCGTTGAGCTTCGGTTGCGTCGCTGCTTTCGCCGCTCTCGTCTTCGGATCTGCCCTTAAAGCT
Protein sequenceShow/hide protein sequence
MAAVSRASFIAIVAVLLAVFSIAAAQSVEPPAPAPASPATSVVPSLSFGCVAAFAALVFGSALKA