; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008670 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008670
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEmbryo defective 1273, putative
Genome locationscaffold4:2976280..2976990
RNA-Seq ExpressionMS008670
SyntenyMS008670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064476.1 putative Embryo defective 1273 [Cucumis melo var. makuwa]7.9e-8277.4Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K     LNSCF L+  R+A+L SS K +M++FMDSN MP++IENLKEKMQ+VVPEPVK+FPWKEAEK+L+ERL+FMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE
        DFVASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+ +GS F+LVKLI YGFA QAQ FPLHVANGGLMQVLWLWRN  +ERN+PNE
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE

Query:  QSPFVVQG
        QSPFV QG
Subjt:  QSPFVVQG

XP_004141304.1 uncharacterized protein LOC101205191 [Cucumis sativus]9.7e-8076.19Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K     LNSCF LH  R+A+L SS K +M++FMDSN +P++IENLKEKMQEVVPEPVK+FPWKEAEK+++ERL FMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE
        D VASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+  GS F+LVKLI YGFA QA  FPLHVANGGLMQVLWLWRN  RERN+PNE
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE

Query:  QSPFVVQGTS
        QS FV Q TS
Subjt:  QSPFVVQGTS

XP_008452688.1 PREDICTED: uncharacterized protein LOC103493634 [Cucumis melo]7.1e-8377.62Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K     LNSCF L+  R+A+L SS K +M++FMDSN MP++IENLKEKMQ+VVPEPVK+FPWKEAEK+L+ERL+FMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE
        DFVASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+ +GS F+LVKLI YGFA QAQ FPLHVANGGLMQVLWLWRN  +ERN+PNE
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE

Query:  QSPFVVQGTS
        QSPFV QGTS
Subjt:  QSPFVVQGTS

XP_022159733.1 uncharacterized protein LOC111026039 [Momordica charantia]3.5e-10698.56Show/hide
Query:  IILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLSD
        IILLKYNSFQLNSCFLLHS RKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLSD
Subjt:  IILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLSD

Query:  FVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNEQ
        FVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFA+GS+FVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNEQ
Subjt:  FVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNEQ

Query:  SPFVVQGTS
        SPFVVQGTS
Subjt:  SPFVVQGTS

XP_038900238.1 uncharacterized protein LOC120087328 [Benincasa hispida]3.2e-8379.25Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K      NSC LL+ SR+A+LA+S K +M++FMDSNSMP++IE+LKEKMQEVVPEPVK+FPWKEAEK+L+ERLLFMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFG--NSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRP
        DFVASI RN+ELLIPIGLF+GVLLTDLLKEISQEVFG  NSEES FKKQL+ +GS FVLVKLIAYGF  QAQAFPLHVANGGLMQVLWLWRN SRERNRP
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFG--NSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRP

Query:  NEQSPFVVQGTS
        NEQSPFV QGTS
Subjt:  NEQSPFVVQGTS

TrEMBL top hitse value%identityAlignment
A0A0A0L2N8 Uncharacterized protein4.7e-8076.19Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K     LNSCF LH  R+A+L SS K +M++FMDSN +P++IENLKEKMQEVVPEPVK+FPWKEAEK+++ERL FMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE
        D VASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+  GS F+LVKLI YGFA QA  FPLHVANGGLMQVLWLWRN  RERN+PNE
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE

Query:  QSPFVVQGTS
        QS FV Q TS
Subjt:  QSPFVVQGTS

A0A1S3BVL5 uncharacterized protein LOC1034936343.5e-8377.62Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K     LNSCF L+  R+A+L SS K +M++FMDSN MP++IENLKEKMQ+VVPEPVK+FPWKEAEK+L+ERL+FMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE
        DFVASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+ +GS F+LVKLI YGFA QAQ FPLHVANGGLMQVLWLWRN  +ERN+PNE
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE

Query:  QSPFVVQGTS
        QSPFV QGTS
Subjt:  QSPFVVQGTS

A0A5A7VDP4 Putative Embryo defective 12733.8e-8277.4Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K     LNSCF L+  R+A+L SS K +M++FMDSN MP++IENLKEKMQ+VVPEPVK+FPWKEAEK+L+ERL+FMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE
        DFVASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+ +GS F+LVKLI YGFA QAQ FPLHVANGGLMQVLWLWRN  +ERN+PNE
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE

Query:  QSPFVVQG
        QSPFV QG
Subjt:  QSPFVVQG

A0A5D3D973 Putative Embryo defective 12733.5e-8377.62Show/hide
Query:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS
        +IIL K     LNSCF L+  R+A+L SS K +M++FMDSN MP++IENLKEKMQ+VVPEPVK+FPWKEAEK+L+ERL+FMGKE  KWSLL+FFV SS S
Subjt:  QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLS

Query:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE
        DFVASI RNQELLIPIGLF+GVLLTDLLKEISQEVFGNSEESSFKKQL+ +GS F+LVKLI YGFA QAQ FPLHVANGGLMQVLWLWRN  +ERN+PNE
Subjt:  DFVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNE

Query:  QSPFVVQGTS
        QSPFV QGTS
Subjt:  QSPFVVQGTS

A0A6J1DZN6 uncharacterized protein LOC1110260391.7e-10698.56Show/hide
Query:  IILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLSD
        IILLKYNSFQLNSCFLLHS RKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLSD
Subjt:  IILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLSD

Query:  FVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNEQ
        FVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFA+GS+FVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNEQ
Subjt:  FVASIFRNQELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNEQ

Query:  SPFVVQGTS
        SPFVVQGTS
Subjt:  SPFVVQGTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGATTATATTGCTGAAGTACAACTCCTTTCAGCTTAATAGCTGCTTCCTGCTGCACAGTAGTCGTAAAGCCTCTCTTGCATCTTCGACGAAAGCAAGAATGTCGCAGTT
TATGGATTCTAATTCCATGCCTATGCAAATTGAAAATTTGAAAGAGAAGATGCAGGAGGTCGTACCGGAACCTGTAAAAGTTTTTCCTTGGAAGGAAGCAGAGAAGATGC
TGCTGGAGAGGCTACTTTTTATGGGGAAGGAGGCATCGAAGTGGTCTCTTCTCGTGTTCTTTGTTTTTAGCTCTTTATCAGATTTTGTAGCTTCCATATTTAGAAACCAA
GAGTTACTGATTCCCATTGGCCTCTTTGTTGGTGTGTTACTGACTGACCTTCTAAAAGAGATTTCTCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAGCA
ACTTTTCGCTGTCGGTTCCATTTTTGTTCTTGTCAAGCTAATTGCTTATGGTTTTGCAACGCAAGCACAAGCATTTCCTTTGCATGTTGCAAATGGTGGGTTAATGCAAG
TTTTGTGGCTGTGGAGAAATCGATCGAGGGAAAGAAATCGACCAAACGAACAGAGCCCTTTCGTAGTCCAAGGTACTTCT
mRNA sequenceShow/hide mRNA sequence
CAGATTATATTGCTGAAGTACAACTCCTTTCAGCTTAATAGCTGCTTCCTGCTGCACAGTAGTCGTAAAGCCTCTCTTGCATCTTCGACGAAAGCAAGAATGTCGCAGTT
TATGGATTCTAATTCCATGCCTATGCAAATTGAAAATTTGAAAGAGAAGATGCAGGAGGTCGTACCGGAACCTGTAAAAGTTTTTCCTTGGAAGGAAGCAGAGAAGATGC
TGCTGGAGAGGCTACTTTTTATGGGGAAGGAGGCATCGAAGTGGTCTCTTCTCGTGTTCTTTGTTTTTAGCTCTTTATCAGATTTTGTAGCTTCCATATTTAGAAACCAA
GAGTTACTGATTCCCATTGGCCTCTTTGTTGGTGTGTTACTGACTGACCTTCTAAAAGAGATTTCTCAAGAAGTGTTTGGCAACTCTGAGGAATCAAGCTTCAAGAAGCA
ACTTTTCGCTGTCGGTTCCATTTTTGTTCTTGTCAAGCTAATTGCTTATGGTTTTGCAACGCAAGCACAAGCATTTCCTTTGCATGTTGCAAATGGTGGGTTAATGCAAG
TTTTGTGGCTGTGGAGAAATCGATCGAGGGAAAGAAATCGACCAAACGAACAGAGCCCTTTCGTAGTCCAAGGTACTTCT
Protein sequenceShow/hide protein sequence
QIILLKYNSFQLNSCFLLHSSRKASLASSTKARMSQFMDSNSMPMQIENLKEKMQEVVPEPVKVFPWKEAEKMLLERLLFMGKEASKWSLLVFFVFSSLSDFVASIFRNQ
ELLIPIGLFVGVLLTDLLKEISQEVFGNSEESSFKKQLFAVGSIFVLVKLIAYGFATQAQAFPLHVANGGLMQVLWLWRNRSRERNRPNEQSPFVVQGTS