; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008672 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008672
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA binding
Genome locationscaffold4:2994418..2995807
RNA-Seq ExpressionMS008672
SyntenyMS008672
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591445.1 hypothetical protein SDJN03_13791, partial [Cucurbita argyrosperma subsp. sororia]3.5e-10190.37Show/hide
Query:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
        MVEF +SDP LW EALSSYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
Subjt:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL

Query:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
        PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPSDVERALWS+A GEK+K SQS
Subjt:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS

Query:  QLEPKNG--SGAKRKRKT
        QL+PKNG  +G+KRKRKT
Subjt:  QLEPKNG--SGAKRKRKT

XP_022139314.1 uncharacterized protein LOC111010256 [Momordica charantia]4.7e-114100Show/hide
Query:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
        MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
Subjt:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL

Query:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
        PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
Subjt:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS

Query:  QLEPKNGSGAKRKRKT
        QLEPKNGSGAKRKRKT
Subjt:  QLEPKNGSGAKRKRKT

XP_022936826.1 uncharacterized protein LOC111443296 [Cucurbita moschata]1.6e-9888.94Show/hide
Query:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
        +EF +SDP LW EALSSYPS+IEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
Subjt:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP

Query:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ
        DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPSDVERALWS+A GEK+K SQSQ
Subjt:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ

Query:  LEPKNG--SGAKRKRKT
        L  KNG  +G+KRKRKT
Subjt:  LEPKNG--SGAKRKRKT

XP_022977105.1 uncharacterized protein LOC111477273 [Cucurbita maxima]1.3e-10089.91Show/hide
Query:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
        MVEF +SDP LW EALSSYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELSKLMQWKLTRGKWRPRL DFVSSLDESLVKLASQKAFQCL
Subjt:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL

Query:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
        PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL+FA  LQ+KAKELSS+GQIFTPSDVERALWS+A GEK+K SQS
Subjt:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS

Query:  QLEPKNG--SGAKRKRKT
        QL+PKNG  +GAKRKRKT
Subjt:  QLEPKNG--SGAKRKRKT

XP_023536029.1 uncharacterized protein LOC111797290 [Cucurbita pepo subsp. pepo]1.7e-10089.91Show/hide
Query:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
        MVEF +S+P LW EAL SYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
Subjt:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL

Query:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
        PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPSDVERALWS+A GEK+K SQS
Subjt:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS

Query:  QLEPKNG--SGAKRKRKT
        QL+PKNG  +GAKRKRKT
Subjt:  QLEPKNG--SGAKRKRKT

TrEMBL top hitse value%identityAlignment
A0A0A0L3W6 Uncharacterized protein9.6e-9786.7Show/hide
Query:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
        M+EF  SDP LW EALS+Y SQIEALGKPNLVSLD FYRNELP +LHKRNP+PYITT ELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
Subjt:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL

Query:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
        PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FAN L++KAKELS +G+IFTPSDVERALWS A GEKLK S+S
Subjt:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS

Query:  QLEPKNG--SGAKRKRKT
        QL+P NG  +G KRKRKT
Subjt:  QLEPKNG--SGAKRKRKT

A0A1S3BUF7 uncharacterized protein LOC103493629 isoform X17.4e-9787.1Show/hide
Query:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
        ++F NSDP LW EALSSY SQIEALGKPNLVSLD FYRNELP +LHKR P+PYITT ELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
Subjt:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP

Query:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ
        DISKAVSELTPLKGVGPATASA+LAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL FAN LQEKAKELS +G+ FTPSDVERALWS A GEKLK SQSQ
Subjt:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ

Query:  LEPKNG--SGAKRKRKT
        L+P NG  +G KRKRKT
Subjt:  LEPKNG--SGAKRKRKT

A0A6J1CCK9 uncharacterized protein LOC1110102562.3e-114100Show/hide
Query:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
        MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
Subjt:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL

Query:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
        PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
Subjt:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS

Query:  QLEPKNGSGAKRKRKT
        QLEPKNGSGAKRKRKT
Subjt:  QLEPKNGSGAKRKRKT

A0A6J1F8K0 uncharacterized protein LOC1114432967.9e-9988.94Show/hide
Query:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
        +EF +SDP LW EALSSYPS+IEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
Subjt:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP

Query:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ
        DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFA  LQ+KAKELSS+GQIFTPSDVERALWS+A GEK+K SQSQ
Subjt:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ

Query:  LEPKNG--SGAKRKRKT
        L  KNG  +G+KRKRKT
Subjt:  LEPKNG--SGAKRKRKT

A0A6J1ILC1 uncharacterized protein LOC1114772736.5e-10189.91Show/hide
Query:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL
        MVEF +SDP LW EALSSYPSQIEALGKPNLVSLD FYRNELP LLHKRNP+PYITT ELSKLMQWKLTRGKWRPRL DFVSSLDESLVKLASQKAFQCL
Subjt:  MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCL

Query:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS
        PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYL+FA  LQ+KAKELSS+GQIFTPSDVERALWS+A GEK+K SQS
Subjt:  PDISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQS

Query:  QLEPKNG--SGAKRKRKT
        QL+PKNG  +GAKRKRKT
Subjt:  QLEPKNG--SGAKRKRKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12210.1 DNA binding4.5e-5476.09Show/hide
Query:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
        +EF+ SD  +W EALSSY S+IE+L KP LVSLD FYR +LP LLH R+PNPY+TT ELS+LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LP
Subjt:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP

Query:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDE
        DISKAV ELT LKGVG ATASAVLAAYAPD+APFMSDE
Subjt:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDE

AT3G12210.2 DNA binding1.0e-7471.36Show/hide
Query:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP
        +EF+ SD  +W EALSSY S+IE+L KP LVSLD FYR +LP LLH R+PNPY+TT ELS+LM+WKL+RGKWRPRLLDFVSSLD+S+VK AS+KAF+ LP
Subjt:  VEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLP

Query:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ
        DISKAV ELT LKGVG ATASAVLAAYAPD+APFMSDEAME ALGNSKDYSLKQYL FA  LQ+KAKEL   G+   PSD+ERALWS     K     SQ
Subjt:  DISKAVSELTPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQ

Query:  LEPKNGSGAKRKR
         E K+ SG KRKR
Subjt:  LEPKNGSGAKRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGTTTCAGAACTCCGATCCAATTCTTTGGGGAGAAGCTCTCTCTTCTTATCCCTCCCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTGGACCATTT
CTACCGAAACGAACTCCCCAATCTTCTCCACAAACGTAACCCTAACCCTTACATCACTACTCCCGAGCTCTCCAAGCTCATGCAATGGAAGCTCACCCGTGGAAAATGGA
GGCCGCGTCTCTTGGACTTCGTTTCATCGTTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTGTCTGAGCTT
ACGCCGCTCAAGGGCGTCGGTCCCGCCACTGCCTCGGCGGTTCTCGCTGCTTACGCGCCGGACGTTGCGCCTTTCATGTCGGATGAGGCTATGGAGGCGGCCCTTGGCAA
CTCCAAGGATTATTCGTTGAAGCAGTACTTATCCTTCGCAAATACGTTGCAAGAGAAAGCCAAGGAATTGAGCTCAGACGGACAAATTTTCACACCATCTGATGTAGAGA
GGGCTTTGTGGAGTTCAGCAACAGGGGAAAAATTGAAAGCTTCACAATCTCAATTAGAACCCAAGAATGGAAGTGGCGCTAAAAGAAAGAGAAAAACT
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGTTTCAGAACTCCGATCCAATTCTTTGGGGAGAAGCTCTCTCTTCTTATCCCTCCCAAATCGAAGCCCTAGGCAAGCCCAATTTGGTTTCTCTGGACCATTT
CTACCGAAACGAACTCCCCAATCTTCTCCACAAACGTAACCCTAACCCTTACATCACTACTCCCGAGCTCTCCAAGCTCATGCAATGGAAGCTCACCCGTGGAAAATGGA
GGCCGCGTCTCTTGGACTTCGTTTCATCGTTGGACGAATCGCTCGTCAAATTGGCCTCTCAGAAGGCCTTCCAATGCCTTCCTGATATTTCCAAAGCCGTGTCTGAGCTT
ACGCCGCTCAAGGGCGTCGGTCCCGCCACTGCCTCGGCGGTTCTCGCTGCTTACGCGCCGGACGTTGCGCCTTTCATGTCGGATGAGGCTATGGAGGCGGCCCTTGGCAA
CTCCAAGGATTATTCGTTGAAGCAGTACTTATCCTTCGCAAATACGTTGCAAGAGAAAGCCAAGGAATTGAGCTCAGACGGACAAATTTTCACACCATCTGATGTAGAGA
GGGCTTTGTGGAGTTCAGCAACAGGGGAAAAATTGAAAGCTTCACAATCTCAATTAGAACCCAAGAATGGAAGTGGCGCTAAAAGAAAGAGAAAAACT
Protein sequenceShow/hide protein sequence
MVEFQNSDPILWGEALSSYPSQIEALGKPNLVSLDHFYRNELPNLLHKRNPNPYITTPELSKLMQWKLTRGKWRPRLLDFVSSLDESLVKLASQKAFQCLPDISKAVSEL
TPLKGVGPATASAVLAAYAPDVAPFMSDEAMEAALGNSKDYSLKQYLSFANTLQEKAKELSSDGQIFTPSDVERALWSSATGEKLKASQSQLEPKNGSGAKRKRKT