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MS008679 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008679
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold4:3030384..3030743
RNA-Seq ExpressionMS008679
SyntenyMS008679
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064469.1 hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa]1.3e-1750.71Show/hide
Query:  VPDHNHFPSNSAILLE----KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCTDG
        VP     PS SA L E    KLPSPP RSES+R S DY   I+YS PR RAESAR+    LW              GC + D  K+ DPFVEAYKKCT+ 
Subjt:  VPDHNHFPSNSAILLE----KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCTDG

Query:  PSIS------GSNTNGVKHRRSIRRVLFSLSRKFYSCEYF
         S+S      GS TNGVK    IRRVLFSLSRK  +   F
Subjt:  PSIS------GSNTNGVKHRRSIRRVLFSLSRKFYSCEYF
KAG6608406.1 hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1452.68Show/hide
Query:  KLPSPPSRSESSRFSNDYGTNISYSPRNRAESARI---ELW----------DACLGCWERDIFKERDPFVEAYKKCTDGPSIS------GSNTNGVKHRR
        KLPSPP RSES+R  +DYG  I  S   RA+SAR+    LW              GC +RD  KE DPFVEAYKKCT+GPS +      GS TNGVK   
Subjt:  KLPSPPSRSESSRFSNDYGTNISYSPRNRAESARI---ELW----------DACLGCWERDIFKERDPFVEAYKKCTDGPSIS------GSNTNGVKHRR

Query:  SIRRVLFSLSRK
          RR+LFSLSRK
Subjt:  SIRRVLFSLSRK
KAG7037747.1 hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1452.68Show/hide
Query:  KLPSPPSRSESSRFSNDYGTNISYSPRNRAESARI---ELW----------DACLGCWERDIFKERDPFVEAYKKCTDGPSIS------GSNTNGVKHRR
        KLPSPP RSES+R  +DYG  I  S   RA+SAR+    LW              GC +RD  KE DPFVEAYKKCT+GPS +      GS TNGVK   
Subjt:  KLPSPPSRSESSRFSNDYGTNISYSPRNRAESARI---ELW----------DACLGCWERDIFKERDPFVEAYKKCTDGPSIS------GSNTNGVKHRR

Query:  SIRRVLFSLSRK
          RR+LFSLSRK
Subjt:  SIRRVLFSLSRK
XP_004141298.1 uncharacterized protein LOC101203728 [Cucumis sativus]5.5e-1651.16Show/hide
Query:  VPDHNHFPSNSAILLE------KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCT
        VP     PS +A L E      KLPSPP RSES+R S DY   I+YS PR RAESAR+    LW              GC + D  K+ DPFVEAYKKC 
Subjt:  VPDHNHFPSNSAILLE------KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCT

Query:  DGPSISG-SNTNGVKHRRSIRRVLFSLSR
        +  SI+G S TNG K    IRRVLFSLSR
Subjt:  DGPSISG-SNTNGVKHRRSIRRVLFSLSR
TrEMBL top hitse value%identityAlignment
A0A0A0KZZ9 Uncharacterized protein1.4e-1749.28Show/hide
Query:  VPDHNHFPSNSAILLE------KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCT
        VP     PS +A L E      KLPSPP RSES+R S DY   I+YS PR RAESAR+    LW              GC + D  K+ DPFVEAYKKC 
Subjt:  VPDHNHFPSNSAILLE------KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCT

Query:  DGPSISG-SNTNGVKHRRSIRRVLFSLSRKFYSCEYFI
        +  SI+G S TNG K    IRRVLFSLSRK ++   F+
Subjt:  DGPSISG-SNTNGVKHRRSIRRVLFSLSRKFYSCEYFI
A0A5D3D9E3 Uncharacterized protein6.3e-1850.71Show/hide
Query:  VPDHNHFPSNSAILLE----KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCTDG
        VP     PS SA L E    KLPSPP RSES+R S DY   I+YS PR RAESAR+    LW              GC + D  K+ DPFVEAYKKCT+ 
Subjt:  VPDHNHFPSNSAILLE----KLPSPPSRSESSRFSNDYGTNISYS-PRNRAESARIE---LW----------DACLGCWERDIFKERDPFVEAYKKCTDG

Query:  PSIS------GSNTNGVKHRRSIRRVLFSLSRKFYSCEYF
         S+S      GS TNGVK    IRRVLFSLSRK  +   F
Subjt:  PSIS------GSNTNGVKHRRSIRRVLFSLSRKFYSCEYF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTCCGGACCACAACCATTTTCCAAGTAATAGTGCAATCTTGCTTGAAAAATTACCATCGCCGCCGAGTCGATCGGAGAGTTCTAGGTTTTCCAACGACTATGGCACGAA
CATCTCATATTCTCCTCGAAATAGGGCGGAGAGTGCGAGGATTGAATTGTGGGATGCGTGTTTGGGGTGCTGGGAACGAGATATTTTTAAGGAGAGAGATCCCTTTGTGG
AAGCCTACAAGAAATGCACTGACGGGCCGTCCATAAGCGGTTCTAATACAAATGGTGTTAAACATCGTCGTAGTATCAGGAGAGTCCTCTTTTCACTTTCACGTAAGTTT
TACTCATGTGAGTATTTTATT
mRNA sequenceShow/hide mRNA sequence
GTTCCGGACCACAACCATTTTCCAAGTAATAGTGCAATCTTGCTTGAAAAATTACCATCGCCGCCGAGTCGATCGGAGAGTTCTAGGTTTTCCAACGACTATGGCACGAA
CATCTCATATTCTCCTCGAAATAGGGCGGAGAGTGCGAGGATTGAATTGTGGGATGCGTGTTTGGGGTGCTGGGAACGAGATATTTTTAAGGAGAGAGATCCCTTTGTGG
AAGCCTACAAGAAATGCACTGACGGGCCGTCCATAAGCGGTTCTAATACAAATGGTGTTAAACATCGTCGTAGTATCAGGAGAGTCCTCTTTTCACTTTCACGTAAGTTT
TACTCATGTGAGTATTTTATT
Protein sequenceShow/hide protein sequence
VPDHNHFPSNSAILLEKLPSPPSRSESSRFSNDYGTNISYSPRNRAESARIELWDACLGCWERDIFKERDPFVEAYKKCTDGPSISGSNTNGVKHRRSIRRVLFSLSRKF
YSCEYFI