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MS008683 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008683
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMixed-linked glucan synthase
Genome locationscaffold4:3060596..3060907
RNA-Seq ExpressionMS008683
SyntenyMS008683
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064464.1 hypothetical protein E6C27_scaffold255G001780 [Cucumis melo var. makuwa]7.0e-4792.31Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MAA TS+CS FFSIRSNSMEPRVRTSSPSHGSP+CGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDE ND+PLIPNDGNLRQDG AAGRRRAG
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

KAG7024315.1 hypothetical protein SDJN02_13129, partial [Cucurbita argyrosperma subsp. argyrosperma]7.2e-4488.46Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MA+ TS+CS FFSIRS+SMEPRVRTSSP+H SPACGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDEAND PLIPNDGNL+QDGAAAGRRR  
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

XP_022977101.1 uncharacterized protein LOC111477268 [Cucurbita maxima]1.5e-4490.38Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MAA TS+CS FFSIRS+SMEPRVRTSSPSH SPACGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDEAND PLIPNDGNL+QDGAAAGRRR  
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

XP_038897734.1 uncharacterized protein LOC120085674 isoform X1 [Benincasa hispida]1.6e-4693.27Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MAA TS+CS FFSIRSNSMEPR+RTSS SHGSPACGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDEANDVPLIPNDGNLRQDG AAGRRRAG
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

XP_038897735.1 uncharacterized protein LOC120085674 isoform X2 [Benincasa hispida]1.6e-4693.27Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MAA TS+CS FFSIRSNSMEPR+RTSS SHGSPACGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDEANDVPLIPNDGNLRQDG AAGRRRAG
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

TrEMBL top hitse value%identityAlignment
A0A061FG81 Uncharacterized protein1.1e-3273.83Show/hide
Query:  MAATTS--SCSGFFSIRSNSMEPRVRTSSPSHGSPA-CGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRR
        MAATTS  SCS FF++RSN++EPRVR SS +HGSPA CGKLDGVA W ING  TAFF SL+RCSCIRIAT EDDG+EANDVPLI +DGN+R D   A RR
Subjt:  MAATTS--SCSGFFSIRSNSMEPRVRTSSPSHGSPA-CGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRR

Query:  RAGKGKK
        R GKGKK
Subjt:  RAGKGKK

A0A0A0L2M3 Uncharacterized protein2.9e-4690.38Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MAA TS+CS FFSIRSNSMEPRVRTSSPSHGSP+CGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDE ND+PLIPNDGNLRQ+G A GRRRAG
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A2R6R383 Protease2.3e-3272.38Show/hide
Query:  MAATT-SSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRA
        MAATT SSCS FF++R+N +EPRVR SSPSHGSP CGK DGV  WLING  +AFF SLDRCSCIRI+T EDDGD+AN++PLI NDGN R D  + GRRR 
Subjt:  MAATT-SSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRA

Query:  GKGKK
        GKGKK
Subjt:  GKGKK

A0A5D3D9D4 Uncharacterized protein3.4e-4792.31Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MAA TS+CS FFSIRSNSMEPRVRTSSPSHGSP+CGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDE ND+PLIPNDGNLRQDG AAGRRRAG
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

A0A6J1IIU9 uncharacterized protein LOC1114772687.0e-4590.38Show/hide
Query:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG
        MAA TS+CS FFSIRS+SMEPRVRTSSPSH SPACGKLDGVATWLINGFVTAFFGSL+RCSCIRIATAEDDGDEAND PLIPNDGNL+QDGAAAGRRR  
Subjt:  MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAG

Query:  KGKK
        KGKK
Subjt:  KGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein9.8e-0737.31Show/hide
Query:  SNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDD--GDEANDVPL
        S+S+     T+S +  + +  KLD  A+W+    ++AFF SL+RCSC+ ++T++DD  G+E+++ PL
Subjt:  SNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDD--GDEANDVPL

AT4G24026.1 unknown protein8.3e-0632.2Show/hide
Query:  MEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEAND
        M+  +  +S    + +  K+D  A+W+    ++AFF SL+RC+C+ ++T+ DD D+ +D
Subjt:  MEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEAND


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGACTACTTCCAGTTGCAGTGGCTTCTTCTCCATCAGATCGAATTCTATGGAGCCAAGAGTGAGAACTTCTTCACCTAGCCATGGCTCTCCAGCATGTGGGAA
GCTTGATGGGGTGGCAACTTGGCTCATCAATGGCTTTGTTACTGCTTTCTTTGGATCTCTGGATCGTTGCTCGTGTATCCGTATCGCCACAGCAGAGGACGATGGCGATG
AGGCGAACGATGTCCCCTTGATCCCGAACGACGGGAACCTACGACAGGATGGTGCTGCCGCCGGCCGGAGGAGGGCCGGGAAAGGCAAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCGACTACTTCCAGTTGCAGTGGCTTCTTCTCCATCAGATCGAATTCTATGGAGCCAAGAGTGAGAACTTCTTCACCTAGCCATGGCTCTCCAGCATGTGGGAA
GCTTGATGGGGTGGCAACTTGGCTCATCAATGGCTTTGTTACTGCTTTCTTTGGATCTCTGGATCGTTGCTCGTGTATCCGTATCGCCACAGCAGAGGACGATGGCGATG
AGGCGAACGATGTCCCCTTGATCCCGAACGACGGGAACCTACGACAGGATGGTGCTGCCGCCGGCCGGAGGAGGGCCGGGAAAGGCAAGAAG
Protein sequenceShow/hide protein sequence
MAATTSSCSGFFSIRSNSMEPRVRTSSPSHGSPACGKLDGVATWLINGFVTAFFGSLDRCSCIRIATAEDDGDEANDVPLIPNDGNLRQDGAAAGRRRAGKGKK