CuGenDBv2

Gene ID	MS008695
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ZCF37, putative
Genome location	scaffold4:3158025..3158606
RNA-Seq Expression	MS008695
Synteny	MS008695
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591424.1 hypothetical protein SDJN03_13770, partial [Cucurbita argyrosperma subsp. sororia]

6.2e-57

66.36

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Query:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-
        MAH+ +     SPNSTP++SRN        KKNPYSDRGLDKFSALLT+LE+KRKKIYSQTDPENIVM+RFAYKNS ECVPVVVKQKDKKE+K +  SE 
Subjt:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-

Query:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP
                 R T  K +DKKS +R RNLRR LSKP  YITAMVILILFLLSVFG+SVTILCTCV+WYL+PVLKQSS       +RKE  RI    KM +P
Subjt:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP

Query:  DASSALSSPIRGHRKSF
        D  SA+SSPI  HRKS+
Subjt:  DASSALSSPIRGHRKSF

XP_022138124.1 uncharacterized protein LOC111009368 [Momordica charantia]

2.3e-96

99.48

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Query:  MAHESLAPNGSSPNSTPRRSRNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKRSTIQKP
        MAHESLAPNGSSPNSTPRRSRNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKRSTIQKP
Subjt:  MAHESLAPNGSSPNSTPRRSRNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKRSTIQKP

Query:  ADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSSKRKEYRRILTAKKMNPDASSALSSPIRGHRKSF
        ADKKSIV+SRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSSKRKEYRRILTAKKMNPDASSALSSPIRGHRKSF
Subjt:  ADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSSKRKEYRRILTAKKMNPDASSALSSPIRGHRKSF

XP_022975775.1 uncharacterized protein LOC111476372 [Cucurbita maxima]

1.9e-58

66.82

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Query:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-
        MAHE +     SPNSTP++SRN        KKNPYSDRGLDKFSALLT+LEEKRKKIYSQTDPENIVMVRFAYKNS ECVPVVVKQKDKKE+K +  SE 
Subjt:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-

Query:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP
                +R T  K +D+K+ +R RNLRR LSKP  YITAMVILILFLLSVFG+SVTILCTC++WYL+PVLKQSS       +RKE  RI    KM +P
Subjt:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP

Query:  DASSALSSPIRGHRKSF
        D  SA+SSPIR HRKS+
Subjt:  DASSALSSPIRGHRKSF

XP_023536130.1 uncharacterized protein LOC111797376 [Cucurbita pepo subsp. pepo]

2.1e-57

65.9

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Query:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-
        MAH+ +     SPNSTP++SRN        KKNPYSDRGLDKFSALLT+LE+KRKKIYSQTDPENIVM+RFAYKNS ECVPVVVKQKDKKE+K +  SE 
Subjt:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-

Query:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP
                 R T  K +DKKS +R RNLRR LSKP  YITAMVILILFLLSVFG+SVTI+CTC++WYL+PVLKQSS       +RKE  RI    KM +P
Subjt:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP

Query:  DASSALSSPIRGHRKSF
        D  SA+SSPIR HRKS+
Subjt:  DASSALSSPIRGHRKSF

XP_038899146.1 uncharacterized protein LOC120086521 [Benincasa hispida]

1.1e-56

67.77

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Query:  HESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVS----
        HES+     SPNSTP++SRN        KKNPYSDRGLDKFSALLT+L+EKRKKIYSQTDPE+IVMVRFAYKNSDECVPVVVKQKDKKE+K S+ S    
Subjt:  HESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVS----

Query:  ----ETKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQS---SKRKEYRRILTAKKM--NPDASSA
            + K+ T  K  +K ++VR+RNLRR LSKP  YI A+VILILFLLSVFG+SVTILCTC+ WYLVPVLKQS   S+RKE  RIL   KM   PD SSA
Subjt:  ----ETKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQS---SKRKEYRRILTAKKM--NPDASSA

Query:  LSSPIRGHRKS
        LSSPI+ HR+S
Subjt:  LSSPIRGHRKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L2K9 Uncharacterized protein

4.5e-53

65.74

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Query:  HESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQ-SDVSET-
        HES+     SPNSTP++SRN        KKNPYSDRGLDKFSALLT+L+EKRKKIYSQTDPE IVMVRFAYKNSDECVPVVVKQKDKKEEK  SD SET 
Subjt:  HESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQ-SDVSET-

Query:  --------KRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQS---SKRKEYRRILTAKKM--NPDAS
                K ST  K  +  ++VR+RNLRR L+KP  YI A+VILILFLLS+FG+SVTILCTC+ WYLVPVLKQS   S+RK   RI    KM   P+AS
Subjt:  --------KRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQS---SKRKEYRRILTAKKM--NPDAS

Query:  SAL---SSPIRGHRKS
        S L   SSPI+ HRK+
Subjt:  SAL---SSPIRGHRKS

A0A5D3D9A0 Putative ZCF37

1.0e-52

63.08

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Query:  HESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKR
        HES+     SPNSTP++SRN        KKNPYSDRGLDKFSALLT+L+EKRKKIYSQTDPE IVMVRFAYKNSDECVPVVVKQKDKKEEK  + S+++ 
Subjt:  HESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKR

Query:  STIQKPADKK--------SIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQS---SKRKEYRRILTAKKM--NPDASSA
        + I+KP   K        ++VR+RNLRR L+KP  YI A+VIL+LFLLS+FG+SVTILCTC+ WYLVPVLKQS   S+RK   RI  + KM   P+AS+ 
Subjt:  STIQKPADKK--------SIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQS---SKRKEYRRILTAKKM--NPDASSA

Query:  L---SSPIRGHRKS
        L   SSP + HRK+
Subjt:  L---SSPIRGHRKS

A0A6J1C965 uncharacterized protein LOC111009368

1.1e-96

99.48

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Query:  MAHESLAPNGSSPNSTPRRSRNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKRSTIQKP
        MAHESLAPNGSSPNSTPRRSRNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKRSTIQKP
Subjt:  MAHESLAPNGSSPNSTPRRSRNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKRSTIQKP

Query:  ADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSSKRKEYRRILTAKKMNPDASSALSSPIRGHRKSF
        ADKKSIV+SRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSSKRKEYRRILTAKKMNPDASSALSSPIRGHRKSF
Subjt:  ADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSSKRKEYRRILTAKKMNPDASSALSSPIRGHRKSF

A0A6J1F7X7 uncharacterized protein LOC111442926

1.1e-56

65.9

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Query:  MAHESLAPNGSSPNSTPRRS--------RNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-
        MAH+ +     SPNSTP++S        R+KKNPYSDRGLDKFSALLT+LE+KRKKIYSQTDPENIVM+RFAYKNS ECVPVVVKQKDKKE+K +  SE 
Subjt:  MAHESLAPNGSSPNSTPRRS--------RNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-

Query:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP
                 R T  K +DKKS +R RNLRR LSKP  YITAMVILILFLLSVFG+SVTILCTCV+WYL+PVLKQSS       +RKE  RI    KM +P
Subjt:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP

Query:  DASSALSSPIRGHRKSF
        D  SA+SSPI  HRKS+
Subjt:  DASSALSSPIRGHRKSF

A0A6J1IHN8 uncharacterized protein LOC111476372

9.4e-59

66.82

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Query:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-
        MAHE +     SPNSTP++SRN        KKNPYSDRGLDKFSALLT+LEEKRKKIYSQTDPENIVMVRFAYKNS ECVPVVVKQKDKKE+K +  SE 
Subjt:  MAHESLAPNGSSPNSTPRRSRN--------KKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSE-

Query:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP
                +R T  K +D+K+ +R RNLRR LSKP  YITAMVILILFLLSVFG+SVTILCTC++WYL+PVLKQSS       +RKE  RI    KM +P
Subjt:  -------TKRSTIQKPADKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-------KRKEYRRILTAKKM-NP

Query:  DASSALSSPIRGHRKSF
        D  SA+SSPIR HRKS+
Subjt:  DASSALSSPIRGHRKSF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G10220.1 BEST Arabidopsis thaliana protein match is: ZCF37 (TAIR:AT1G59590.1)

4.1e-14

53.16

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Query:  SPNSTPRRSR----NKKNPYSDRGLDKFSALLTNLEEKRKKIYS-QTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEK
        SP S+PRRSR      KNPYS++GLDKFSALL+ L+EKR+ IY+ + DP+   +VRF + +S ECVPV++K K   ++K
Subjt:  SPNSTPRRSR----NKKNPYSDRGLDKFSALLTNLEEKRKKIYS-QTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEK

AT1G59590.1 ZCF37

1.4e-22

40.11

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Query:  SPNSTPRRSRN-KKNPYSDRGLDKFSALLTNLEEKRKKIYS-QTDPENIVMVRFAYKNSDECVPVVVKQK--DKKEEKQSDVSETKRSTIQKPA------
        SP S+P++SR   KNPYS+RGLDKFS LL+ L+EKR+ IYS + D     +VRF + +S ECVPVV++     KK +K  DV   K  T  K A      
Subjt:  SPNSTPRRSRN-KKNPYSDRGLDKFSALLTNLEEKRKKIYS-QTDPENIVMVRFAYKNSDECVPVVVKQK--DKKEEKQSDVSETKRSTIQKPA------

Query:  -------DKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-----------KRKEYRRILT
                K+S V + NL++ +++P  ++   VIL+L  L+ FG+SV I+ TC+ WYLVP +++ S           K+K++ R L+
Subjt:  -------DKKSIVRSRNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSS-----------KRKEYRRILT

Sequences

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CDS sequence

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GTAATGGCTCACGAATCATTGGCCCCAAATGGCAGCAGCCCCAATTCCACTCCCAGAAGGTCCAGAAACAAGAAGAATCCTTACTCCGACCGTGGCCTCGACAAATTCTC
TGCCCTGTTAACAAATCTTGAAGAAAAAAGGAAGAAAATTTACTCCCAAACCGACCCAGAAAACATAGTTATGGTTCGTTTTGCTTACAAGAATTCAGATGAGTGCGTTC
CAGTGGTGGTGAAGCAGAAGGACAAGAAAGAAGAGAAGCAGAGTGATGTTTCAGAGACCAAACGATCGACAATCCAGAAGCCGGCCGACAAGAAGAGCATCGTACGGTCG
AGAAATTTAAGGAGATTATTGAGCAAACCGTGTTGTTATATTACAGCCATGGTGATTTTGATTCTGTTTCTGTTGAGTGTGTTTGGGAAATCGGTGACCATCCTCTGCAC
TTGTGTTCTTTGGTATTTGGTCCCTGTTTTGAAACAGAGCTCTAAGAGAAAGGAGTATAGAAGAATTTTGACTGCAAAAAAGATGAACCCAGATGCCTCTTCTGCTCTTT
CTTCTCCAATTCGAGGCCATCGGAAAAGCTTT

mRNA sequence

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Protein sequence

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VMAHESLAPNGSSPNSTPRRSRNKKNPYSDRGLDKFSALLTNLEEKRKKIYSQTDPENIVMVRFAYKNSDECVPVVVKQKDKKEEKQSDVSETKRSTIQKPADKKSIVRS
RNLRRLLSKPCCYITAMVILILFLLSVFGKSVTILCTCVLWYLVPVLKQSSKRKEYRRILTAKKMNPDASSALSSPIRGHRKSF

MS008695 (gene) of Bitter gourd (TR) v1 genome