; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008708 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008708
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycosyl hydrolase family 35 protein
Genome locationscaffold4:3250815..3251305
RNA-Seq ExpressionMS008708
SyntenyMS008708
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591414.1 hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2973.12Show/hide
Query:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDFA
        +DMAL+H H+ PNE LS IP NRKLKFQ D+++S  + KVH GDL LDDY  IDPVPSSKTSVKPGPIEHGAPLLPH+P PPPPD  QPGD+A
Subjt:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDFA

XP_022154397.1 uncharacterized protein LOC111021399 isoform X1 [Momordica charantia]3.1e-4597.85Show/hide
Query:  VADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF
        VADMALNHRHLEPNES SAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHG PLLPHIPNPPPPDQPQPGDF
Subjt:  VADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF

XP_022155067.1 uncharacterized protein LOC111021399 isoform X2 [Momordica charantia]2.0e-4496.74Show/hide
Query:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF
        +DMALNHRHLEPNES SAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHG PLLPHIPNPPPPDQPQPGDF
Subjt:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF

XP_022155712.1 uncharacterized protein LOC111021399 isoform X3 [Momordica charantia]1.3e-4397.78Show/hide
Query:  MALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF
        MALNHRHLEPNES SAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHG PLLPHIPNPPPPDQPQPGDF
Subjt:  MALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF

XP_038899330.1 uncharacterized protein LOC120086661 [Benincasa hispida]1.3e-3076.34Show/hide
Query:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDFA
        +D+ALN+ H+ PN+ LS IPLNRKLKFQ DE+ S  R KVH GDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPH+PN PPP   QPGD+A
Subjt:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDFA

TrEMBL top hitse value%identityAlignment
A0A5A7VB21 Uncharacterized protein9.7e-2974.71Show/hide
Query:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQP
        AD+ALN  H+   + LS +PLNRKLKFQ DE+ +  R KVH GDLNLDDYHPIDPVPSSKTSVKPGPIEH APLLPH+PNPPPP+QP
Subjt:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQP

A0A6J1DLK4 uncharacterized protein LOC111021399 isoform X11.5e-4597.85Show/hide
Query:  VADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF
        VADMALNHRHLEPNES SAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHG PLLPHIPNPPPPDQPQPGDF
Subjt:  VADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF

A0A6J1DND6 uncharacterized protein LOC111021399 isoform X29.6e-4596.74Show/hide
Query:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF
        +DMALNHRHLEPNES SAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHG PLLPHIPNPPPPDQPQPGDF
Subjt:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF

A0A6J1DQ33 uncharacterized protein LOC111021399 isoform X36.2e-4497.78Show/hide
Query:  MALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF
        MALNHRHLEPNES SAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHG PLLPHIPNPPPPDQPQPGDF
Subjt:  MALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDF

A0A6J1FA15 uncharacterized protein LOC1114434643.3e-2973.12Show/hide
Query:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDFA
        +DMAL+H H+ PNE LS IP NRKLKFQ D+++S  + KVH GDL LDDY  IDPVPSSKTSVKPGPIEHGAPLLPH+P PPPPD  QPGD+A
Subjt:  ADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01075.1 Glycosyl hydrolase family 35 protein1.9e-0856.52Show/hide
Query:  LNLDDYH-PIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQP
        + L+DY+ P+DP P++K S+KPGPIEHG PL P+IP PP P    P
Subjt:  LNLDDYH-PIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTACTGCAATTTCATGTTGATTTTGATGTACTTTTCTTGATTGTAGTTGCAGATATGGCTCTGAACCACCGCCATCTTGAGCCAAATGAATCTCTTTCTGCCATTCCATT
AAACAGGAAGCTGAAGTTTCAGAATGATGAATATGATAGCCCGAGAAGAAACAAGGTTCACCAAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAA
GTTCAAAGACATCGGTAAAACCCGGGCCGATAGAGCACGGCGCTCCTCTCCTGCCTCATATTCCAAATCCTCCACCTCCTGATCAACCTCAGCCGGGGGATTTCGCG
mRNA sequenceShow/hide mRNA sequence
CTACTGCAATTTCATGTTGATTTTGATGTACTTTTCTTGATTGTAGTTGCAGATATGGCTCTGAACCACCGCCATCTTGAGCCAAATGAATCTCTTTCTGCCATTCCATT
AAACAGGAAGCTGAAGTTTCAGAATGATGAATATGATAGCCCGAGAAGAAACAAGGTTCACCAAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAA
GTTCAAAGACATCGGTAAAACCCGGGCCGATAGAGCACGGCGCTCCTCTCCTGCCTCATATTCCAAATCCTCCACCTCCTGATCAACCTCAGCCGGGGGATTTCGCG
Protein sequenceShow/hide protein sequence
LLQFHVDFDVLFLIVVADMALNHRHLEPNESLSAIPLNRKLKFQNDEYDSPRRNKVHQGDLNLDDYHPIDPVPSSKTSVKPGPIEHGAPLLPHIPNPPPPDQPQPGDFA