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MS008711 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008711
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionElongation factor
Genome locationscaffold4:3260895..3261386
RNA-Seq ExpressionMS008711
SyntenyMS008711
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8023211.1 hypothetical protein BT93_F0653 [Corymbia citriodora subsp. variegata]3.1e-1956.67Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRK-RRSLWNIFGWARSAPCIGTRF
        M+WW R   PL++    VA+RLG RK +GLLKL  DVR CEY+DVHVMWEML RNE E+   P+  R  + S W+IFGWAR APC+   F
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRK-RRSLWNIFGWARSAPCIGTRF

KAG6591414.1 hypothetical protein SDJN03_13760, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2170.37Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARS
        M WWSRMT+PLR F   +ASRLGFRKR GLLKLGRDVRACEY DV VMWEM++RNE E+    E RRKRRSL NI  W  S
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARS

KAG6608437.1 hypothetical protein SDJN03_01779, partial [Cucurbita argyrosperma subsp. sororia]9.6e-2972.22Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPE-IRRKRRSLWNIFGWARSAPCIGTRF
        MEWW ++ +PLR F   VASRLG+RKR GLLKLGRDV+ACEYEDVHVMWEML+RNE+E    PE  RRK+R +WNIF WARSAPCIG RF
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPE-IRRKRRSLWNIFGWARSAPCIGTRF

KAG7024293.1 hypothetical protein SDJN02_13107, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2569.66Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCIGTRF
        M WWSRMT+PLR F   +ASRLGFRKR GLLKLGRDVRACEY DV VMWEM++RNE E+    E RRKRRSL NI  W  S  CIG RF
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCIGTRF

KCW66288.1 hypothetical protein EUGRSUZ_F00117 [Eucalyptus grandis]4.5e-1856.18Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCIGTRF
        M  W R   PL++    VA+RLG RK +G LKL  DVR CEY+DVHVMWEML RNE E+ +    R K RS W+IFGWAR APC+   F
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCIGTRF

TrEMBL top hitse value%identityAlignment
A0A059BJK4 Uncharacterized protein2.2e-1856.18Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCIGTRF
        M  W R   PL++    VA+RLG RK +G LKL  DVR CEY+DVHVMWEML RNE E+ +    R K RS W+IFGWAR APC+   F
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCIGTRF

A0A061FFT5 Uncharacterized protein2.2e-1862.65Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAP
        M ++ RMT P+R     VA+RLG RK +GLLKL +DVR+CEYEDVHVMWEMLRRNE+E+G  P  R K+R L N F WAR AP
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAP

A0A0A0L522 Uncharacterized protein3.3e-2772.41Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNES-ELGEFPEIRRKRRSLWNIFGWARSAPCIG
        MEWW +M+ PLRSF   VA RLGFRKR GL+KLGRDV+ACEYEDVHVMWEML+RNE+ +L    E R+KR+SLWNIF WARSAPC+G
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNES-ELGEFPEIRRKRRSLWNIFGWARSAPCIG

A0A218WD46 uncharacterized protein LOC1162151543.7e-1855.42Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAP
        ++ W +M  PLR+    VA+RLG R R GLLKL +DVR CEY+DVHVMW ML++NE+E       RRK+RS W+ F WAR AP
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAP

A0A7N2RF01 Uncharacterized protein3.7e-1857.65Show/hide
Query:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCI
        MEWW ++  P+R     VA+RLG RK +GLLKL  DV  CEYEDV VMWEML+R+E+E    PE + K+RS WNIF WAR  PC+
Subjt:  MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43150.1 unknown protein3.0e-1240.51Show/hide
Query:  EWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFP---EIRRKRRSLWNIFG
        EWW+ M  P R        R+GFR  +GLL+L  DV +CEYED+H+MW +L +NE +L   P   + +++++  WN+ G
Subjt:  EWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFP---EIRRKRRSLWNIFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGGTGGAGCAGGATGACTACTCCGCTGCGAAGCTTTTGCTGCAGCGTCGCCTCTCGTCTCGGATTCCGCAAACGCGCAGGGCTACTGAAACTTGGGCGAGATGT
TAGGGCTTGCGAATACGAGGACGTGCACGTGATGTGGGAGATGCTGAGGAGGAACGAATCAGAGCTCGGTGAATTCCCAGAAATACGTCGAAAGAGGAGATCCTTATGGA
ACATCTTTGGGTGGGCTCGATCCGCTCCATGTATTGGCACCAGGTTC
mRNA sequenceShow/hide mRNA sequence
ATGGAATGGTGGAGCAGGATGACTACTCCGCTGCGAAGCTTTTGCTGCAGCGTCGCCTCTCGTCTCGGATTCCGCAAACGCGCAGGGCTACTGAAACTTGGGCGAGATGT
TAGGGCTTGCGAATACGAGGACGTGCACGTGATGTGGGAGATGCTGAGGAGGAACGAATCAGAGCTCGGTGAATTCCCAGAAATACGTCGAAAGAGGAGATCCTTATGGA
ACATCTTTGGGTGGGCTCGATCCGCTCCATGTATTGGCACCAGGTTC
Protein sequenceShow/hide protein sequence
MEWWSRMTTPLRSFCCSVASRLGFRKRAGLLKLGRDVRACEYEDVHVMWEMLRRNESELGEFPEIRRKRRSLWNIFGWARSAPCIGTRF