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MS008712 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008712
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUncharacterised protein family SERF
Genome locationscaffold4:3263329..3264003
RNA-Seq ExpressionMS008712
SyntenyMS008712
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR026939 - ZNF706/At2g23090 superfamily
IPR039438 - At2g23090-like, zinc-binding domain
IPR039713 - At2g23090-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141283.1 uncharacterized protein At2g23090 [Cucumis sativus]1.2e-3293.51Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKA+MARERN+EKQK+SRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKS++YACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
XP_008452628.1 PREDICTED: uncharacterized protein At2g23090-like [Cucumis melo]5.5e-3394.81Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKS++YACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
XP_022143878.1 uncharacterized protein At2g23090-like isoform X1 [Momordica charantia]6.1e-3288.51Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSR----------GSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKARMARERNMEKQKSSR          GSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSR----------GSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
XP_022143957.1 uncharacterized protein At2g23090-like isoform X2 [Momordica charantia]2.2e-34100Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
XP_038897649.1 uncharacterized protein At2g23090-like [Benincasa hispida]1.2e-3293.51Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQK++MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKS++YACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
TrEMBL top hitse value%identityAlignment
A0A0A0KZW6 Uncharacterized protein6.0e-3393.51Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKA+MARERN+EKQK+SRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKS++YACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
A0A1S3BU86 uncharacterized protein At2g23090-like2.7e-3394.81Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKS++YACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
A0A5A7VFF4 Uncharacterized protein2.7e-3394.81Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKS++YACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
A0A6J1CRT6 uncharacterized protein At2g23090-like isoform X13.0e-3288.51Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSR----------GSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKARMARERNMEKQKSSR          GSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSR----------GSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
A0A6J1CSB6 uncharacterized protein At2g23090-like isoform X21.1e-34100Show/hide
Query:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
SwissProt top hitse value%identityAlignment
O64818 Uncharacterized protein At2g230903.6e-2775.64Show/hide
Query:  MGGGNGQKARMARERNMEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGN QK+ MAR +N+EK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHAEA+HPK+++ ACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
Arabidopsis top hitse value%identityAlignment
AT2G23090.1 Uncharacterised protein family SERF2.6e-2875.64Show/hide
Query:  MGGGNGQKARMARERNMEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK
        MGGGN QK+ MAR +N+EK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHAEA+HPK+++ ACFPHLKK
Subjt:  MGGGNGQKARMARERNMEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGAGGCAATGGCCAGAAGGCTAGAATGGCTCGGGAGAGGAACATGGAGAAACAAAAGTCCTCCAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAAT
ACAGTGCAAGGTATGCATGCAGACGTTTATATGTACAACTACAGAGGTGAAGTGCAGAGAACATGCAGAAGCAAGGCACCCGAAATCTGAATTATATGCCTGTTTTCCCC
ATCTTAAGAAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGAGGCAATGGCCAGAAGGCTAGAATGGCTCGGGAGAGGAACATGGAGAAACAAAAGTCCTCCAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAAT
ACAGTGCAAGGTATGCATGCAGACGTTTATATGTACAACTACAGAGGTGAAGTGCAGAGAACATGCAGAAGCAAGGCACCCGAAATCTGAATTATATGCCTGTTTTCCCC
ATCTTAAGAAA
Protein sequenceShow/hide protein sequence
MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK