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MS008720 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008720
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold4:3300457..3300669
RNA-Seq ExpressionMS008720
SyntenyMS008720
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064426.1 hypothetical protein E6C27_scaffold255G001340 [Cucumis melo var. makuwa]3.3e-0858.33Show/hide
Query:  MEARLLLLMAVFTLLVSGENQQTMGVVV---------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPN
        MEARLLLLMAV TLLVSG N+ TMGV V         +MQ +HRK L    SPP   H FNALF+SKR+  N
Subjt:  MEARLLLLMAVFTLLVSGENQQTMGVVV---------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPN

KAE8649873.1 hypothetical protein Csa_012848, partial [Cucumis sativus]1.8e-0955.07Show/hide
Query:  TLLVSGENQQTMGVVV----------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR
        TLLVSG+N+ TMG             +MQ +HRK L    SPPP  H FNALF+SKR+VPNT DP+HNR
Subjt:  TLLVSGENQQTMGVVV----------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR

KDP41663.1 hypothetical protein JCGZ_16070 [Jatropha curcas]2.9e-0442.86Show/hide
Query:  EARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR
        + ++++L+ +++LLVSGE ++TM V      + R+Q          + SF+ LFSSKR+VPN SDPLHNR
Subjt:  EARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR

OMO70596.1 hypothetical protein COLO4_28570 [Corchorus olitorius]5.0e-0446.58Show/hide
Query:  LLLLMAVFTLLVSG-ENQQTM--GVVVDMQGRHRKQLPSPPSPPP---WKHSFNALFSSKRRVPNTSDPLHNR
        +++L+ +F LLVSG +N+++M   + V  QG    Q  +     P    +HSF+A FSSKRRVPN SDPLHNR
Subjt:  LLLLMAVFTLLVSG-ENQQTM--GVVVDMQGRHRKQLPSPPSPPP---WKHSFNALFSSKRRVPNTSDPLHNR

OMO78847.1 hypothetical protein CCACVL1_14077 [Corchorus capsularis]6.5e-0443.24Show/hide
Query:  LLLLMAVFTLLVSGE---NQQTMGVVVDMQ---GRHRKQLPSPPSPPP-WKHSFNALFSSKRRVPNTSDPLHNR
        +++L+ VF LLVSG+   N+++M   +++    G+  + +   P P    +HSF+  FSSKRRVPN SDPLHNR
Subjt:  LLLLMAVFTLLVSGE---NQQTMGVVVDMQ---GRHRKQLPSPPSPPP-WKHSFNALFSSKRRVPNTSDPLHNR

TrEMBL top hitse value%identityAlignment
A0A067L375 Uncharacterized protein1.4e-0442.86Show/hide
Query:  EARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR
        + ++++L+ +++LLVSGE ++TM V      + R+Q          + SF+ LFSSKR+VPN SDPLHNR
Subjt:  EARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR

A0A0A0KZW1 Uncharacterized protein1.2e-1460.49Show/hide
Query:  MEARLLLLMAVFTLLVSGENQQTMGVVV----------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR
        MEARLLLLMAV TLLVSG+N+ TMG             +MQ +HRK L    SPPP  H FNALF+SKR+VPNT DP+HNR
Subjt:  MEARLLLLMAVFTLLVSGENQQTMGVVV----------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR

A0A1R3HJP1 Uncharacterized protein2.4e-0446.58Show/hide
Query:  LLLLMAVFTLLVSG-ENQQTM--GVVVDMQGRHRKQLPSPPSPPP---WKHSFNALFSSKRRVPNTSDPLHNR
        +++L+ +F LLVSG +N+++M   + V  QG    Q  +     P    +HSF+A FSSKRRVPN SDPLHNR
Subjt:  LLLLMAVFTLLVSG-ENQQTM--GVVVDMQGRHRKQLPSPPSPPP---WKHSFNALFSSKRRVPNTSDPLHNR

A0A1R3I8C4 Uncharacterized protein3.1e-0443.24Show/hide
Query:  LLLLMAVFTLLVSGE---NQQTMGVVVDMQ---GRHRKQLPSPPSPPP-WKHSFNALFSSKRRVPNTSDPLHNR
        +++L+ VF LLVSG+   N+++M   +++    G+  + +   P P    +HSF+  FSSKRRVPN SDPLHNR
Subjt:  LLLLMAVFTLLVSGE---NQQTMGVVVDMQ---GRHRKQLPSPPSPPP-WKHSFNALFSSKRRVPNTSDPLHNR

A0A5D3D9C5 Uncharacterized protein1.6e-0858.33Show/hide
Query:  MEARLLLLMAVFTLLVSGENQQTMGVVV---------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPN
        MEARLLLLMAV TLLVSG N+ TMGV V         +MQ +HRK L    SPP   H FNALF+SKR+  N
Subjt:  MEARLLLLMAVFTLLVSGENQQTMGVVV---------DMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCTCGGCTGCTTCTGTTAATGGCGGTTTTCACTCTTCTGGTCTCCGGGGAAAACCAACAGACAATGGGGGTCGTCGTCGATATGCAAGGTCGCCACCGGAAGCA
GCTGCCGTCGCCACCATCGCCGCCGCCGTGGAAGCACTCATTCAATGCGCTGTTTTCAAGCAAGAGGAGGGTCCCAAACACATCGGATCCACTCCATAATCGT
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCTCGGCTGCTTCTGTTAATGGCGGTTTTCACTCTTCTGGTCTCCGGGGAAAACCAACAGACAATGGGGGTCGTCGTCGATATGCAAGGTCGCCACCGGAAGCA
GCTGCCGTCGCCACCATCGCCGCCGCCGTGGAAGCACTCATTCAATGCGCTGTTTTCAAGCAAGAGGAGGGTCCCAAACACATCGGATCCACTCCATAATCGT
Protein sequenceShow/hide protein sequence
MEARLLLLMAVFTLLVSGENQQTMGVVVDMQGRHRKQLPSPPSPPPWKHSFNALFSSKRRVPNTSDPLHNR