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MS008725 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008725
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold4:3342556..3342792
RNA-Seq ExpressionMS008725
SyntenyMS008725
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064422.1 hypothetical protein E6C27_scaffold255G001300 [Cucumis melo var. makuwa]5.4e-0757.97Show/hide
Query:  MVASTQMLTVEGRILK-------PIGEKPIGV--AFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        M+AST  L VEGR+L+        + EK  GV    + + NSLSS S S+FRSLSFVLASGPSKKGPGH
Subjt:  MVASTQMLTVEGRILK-------PIGEKPIGV--AFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

KAG6591405.1 hypothetical protein SDJN03_13751, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1565.17Show/hide
Query:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPIGEK------------PIGV-AFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        AT S K LCF+VGVLLMVAS   LTVEGR L+ + EK             IGV AF  QVNSLSS S S FRSLSFVLASGPSKKGPGH
Subjt:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPIGEK------------PIGV-AFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

KAG6608443.1 hypothetical protein SDJN03_01785, partial [Cucurbita argyrosperma subsp. sororia]5.0e-1360Show/hide
Query:  TESTKHLCFLVGVLLMVASTQMLTVEGRILKPIGE----KPIG-VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        T S + LCF+VGVLLMV  TQ ++VEGR+LK + +    +PIG VA++  ++SLS  S SAF SLSFVL+SGPSKKGPGH
Subjt:  TESTKHLCFLVGVLLMVASTQMLTVEGRILKPIGE----KPIG-VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

KGN55240.1 hypothetical protein Csa_012906 [Cucumis sativus]6.5e-1357.83Show/hide
Query:  STKHLCFLVGVLLMVASTQMLTVEGRILKPIGEKPIG----------VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        STK +CF+VGVLLM+AST  L VEGR+L+   EK             +  + + NSLSS S S+FRSLSFVLASGPSKKGPGH
Subjt:  STKHLCFLVGVLLMVASTQMLTVEGRILKPIGEKPIG----------VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

XP_019071956.1 PREDICTED: uncharacterized protein LOC109121646 [Vitis vinifera]5.0e-0543.02Show/hide
Query:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPI----------GEKPIGVAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        AT S K L F++ VL++V STQ   V  R L+            G++ +GVA    V+S +S   S+ RSL++ LASGPSK+GPGH
Subjt:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPI----------GEKPIGVAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

TrEMBL top hitse value%identityAlignment
A0A0A0KZV6 Uncharacterized protein3.2e-1357.83Show/hide
Query:  STKHLCFLVGVLLMVASTQMLTVEGRILKPIGEKPIG----------VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        STK +CF+VGVLLM+AST  L VEGR+L+   EK             +  + + NSLSS S S+FRSLSFVLASGPSKKGPGH
Subjt:  STKHLCFLVGVLLMVASTQMLTVEGRILKPIGEKPIG----------VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

A0A438DYT8 Uncharacterized protein2.4e-0543.02Show/hide
Query:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPI----------GEKPIGVAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        AT S K L F++ VL++V STQ   V  R L+            G++ +GVA    V+S +S   S+ RSL++ LASGPSK+GPGH
Subjt:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPI----------GEKPIGVAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

A0A5B7BBR4 Uncharacterized protein (Fragment)7.1e-0546.99Show/hide
Query:  STKHLCFLVGVLLMVASTQMLTVEGRILKPIGEKPIG----------VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        S K LCF++GV+++V  TQ   V  R L+   E  I           V F    N+ SS S SA RSL F LASGPSKKGPGH
Subjt:  STKHLCFLVGVLLMVASTQMLTVEGRILKPIGEKPIG----------VAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

A0A5D3D9C4 Uncharacterized protein2.6e-0757.97Show/hide
Query:  MVASTQMLTVEGRILK-------PIGEKPIGV--AFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        M+AST  L VEGR+L+        + EK  GV    + + NSLSS S S+FRSLSFVLASGPSKKGPGH
Subjt:  MVASTQMLTVEGRILK-------PIGEKPIGV--AFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

F6GZW6 Uncharacterized protein2.4e-0543.02Show/hide
Query:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPI----------GEKPIGVAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH
        AT S K L F++ VL++V STQ   V  R L+            G++ +GVA    V+S +S   S+ RSL++ LASGPSK+GPGH
Subjt:  ATESTKHLCFLVGVLLMVASTQMLTVEGRILKPI----------GEKPIGVAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCCACAGAATCAACCAAGCATCTCTGTTTTCTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCAGATGCTAACTGTTGAGGGCAGAATTCTAAAGCCAAT
CGGAGAGAAGCCAATTGGAGTAGCTTTTATCCACCAAGTGAATTCATTAAGCAGCAGAAGTAGCAGTGCTTTTAGAAGCTTGAGTTTTGTGTTGGCGTCTGGGCCTAGTA
AAAAAGGCCCCGGACAT
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCCACAGAATCAACCAAGCATCTCTGTTTTCTTGTGGGTGTTCTGTTAATGGTGGCTTCGACGCAGATGCTAACTGTTGAGGGCAGAATTCTAAAGCCAAT
CGGAGAGAAGCCAATTGGAGTAGCTTTTATCCACCAAGTGAATTCATTAAGCAGCAGAAGTAGCAGTGCTTTTAGAAGCTTGAGTTTTGTGTTGGCGTCTGGGCCTAGTA
AAAAAGGCCCCGGACAT
Protein sequenceShow/hide protein sequence
MAMATESTKHLCFLVGVLLMVASTQMLTVEGRILKPIGEKPIGVAFIHQVNSLSSRSSSAFRSLSFVLASGPSKKGPGH