; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008732 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008732
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein DCL homolog, chloroplastic-like
Genome locationscaffold4:3385949..3388956
RNA-Seq ExpressionMS008732
SyntenyMS008732
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608449.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-9587.24Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        M ASLLLRGHPL+RLGLR+RGLCTGIVQVTRRSCCTA  A TPP G L+SAEN TSVLS++DPPKY RWDEP YRKWK+QEEE+L+DI+P+ISLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLT  DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP YAERFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

XP_022135338.1 protein DCL, chloroplastic isoform X1 [Momordica charantia]5.4e-10999.49Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

XP_022940238.1 protein DCL homolog, chloroplastic-like [Cucurbita moschata]9.9e-9586.73Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        M ASLLLRGHPL+RLGLR+RGLC GIVQVTRRSCCTA  A TPP G L+SAEN TSVLS++DPPKY RW+EP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLT  DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP YAERFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

XP_022982288.1 protein DCL homolog, chloroplastic-like isoform X1 [Cucurbita maxima]4.5e-9586.73Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        M ASLLLRGHPL+RLGLR+RGLCTGI+QVTRRSCCTA  A TPP G L+SAEN TSVLS++DPPKY RWDEP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLT  DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP YA+RFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

XP_023536078.1 protein DCL homolog, chloroplastic-like [Cucurbita pepo subsp. pepo]5.8e-9586.22Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        MAASLLLRGHPLLR GL HRGLC+G+VQVTRRSCCTATAA TPPDG+LTSAEN  SV S+S P KY RW EPDYRKWKDQE+E+L+D+EP+ISLTKEI+H
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLTS DERIVV+RLLAHHPHAEDKIGCGLE IMVDRHPQFRHSRC FV+RTDGGWIDFSYQKCLRAYIR+KYPSYAE FIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

TrEMBL top hitse value%identityAlignment
A0A1S3BU88 protein DCL, chloroplastic1.8e-9485.2Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        MAAS L RGHPLLRLGL+ RGLCTG+VQVTRRSCC+AT A TP DG+LT+ +N TS++SSS+PPKY RWDEPDYRKWK+QEEE+L DIEPII LTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        S+RY DGERLT  DER VV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPS+AERFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

A0A6J1C4J4 protein DCL, chloroplastic isoform X12.6e-10999.49Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

A0A6J1FNQ4 protein DCL homolog, chloroplastic-like4.8e-9586.73Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        M ASLLLRGHPL+RLGLR+RGLC GIVQVTRRSCCTA  A TPP G L+SAEN TSVLS++DPPKY RW+EP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLT  DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP YAERFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

A0A6J1IHJ1 protein DCL homolog, chloroplastic-like1.5e-9385.2Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        MAASLLLRGHPLLR GL HRGLC+G+VQVTRRSCCTATAA TPPDG+LTSAEN  SV S+S   KY RW EPDYRKWKDQE+E+L+D+EP++SLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLTS DERIVV+RLLAHHPHAEDKIGCGLE IMVDRHPQFR+SRC FV+RTDGGWIDFSYQKCLRAYIR+KYPSYAE FIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

A0A6J1J4G4 protein DCL homolog, chloroplastic-like isoform X12.2e-9586.73Show/hide
Query:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH
        M ASLLLRGHPL+RLGLR+RGLCTGI+QVTRRSCCTA  A TPP G L+SAEN TSVLS++DPPKY RWDEP YRKWK+QEEE+L+DI+PIISLTKEILH
Subjt:  MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILH

Query:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS
        SNRYVDGERLT  DE+IVV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP YA+RFIREHFKRGS
Subjt:  SNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS

SwissProt top hitse value%identityAlignment
Q42463 Protein DCL, chloroplastic1.9e-2743.44Show/hide
Query:  DYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL
        D   W D E+++L D  P++   + ILHS +Y  G+RL+   +R ++ RLL +HP  + KIG G++ I V  HP F +SRC F++R DG  +DFSY KC+
Subjt:  DYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL

Query:  RAYIRNKYPSYAERFIREHFKR
        +  IR  YP YA+ FI  HF++
Subjt:  RAYIRNKYPSYAERFIREHFKR

Q5D869 DNA-directed RNA polymerase V subunit 11.9e-2442.61Show/hide
Query:  QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNK
        +E+E+L+D+EP++   ++I+H + Y DG+ ++  D+  V+ ++L  HP  E K+G G++ I VD+H  F  SRCFFV+ TDG   DFSY+K L  Y+  K
Subjt:  QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNK

Query:  YPSYAERFIREHFKR
        YP  AE FI ++F +
Subjt:  YPSYAERFIREHFKR

Q8L557 Protein EMBRYO DEFECTIVE 5144.4e-0535.59Show/hide
Query:  DERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL
        +  ++++ +   H   E KIG G+++  V  HP ++ SRCFF++R D    DFS++KC+
Subjt:  DERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL

Q9C642 Protein DCL homolog, chloroplastic4.1e-2740Show/hide
Query:  SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRT
        SS+  +    +  +  ++ D E+++L    P++   + ILHS +Y + +RL+   ER ++  LL +HP  E KIGCG++ IMV  HP F  SRC F++R 
Subjt:  SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRT

Query:  DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
        DG  +DFSY KC++  I+ KYP YA+ FI  HF++
Subjt:  DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR

Q9LQ02 DNA-directed RNA polymerase IV subunit 16.2e-0734.55Show/hide
Query:  DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
        +IE +    K ILHS  Y   E L   DE + V  +L  HP++ +KIG G++ I V +  +   S CF V+R DG + DFSY KC+    +   P     
Subjt:  DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER

Query:  FIREHFKRGS
        +  ++ K G+
Subjt:  FIREHFKRGS

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)2.9e-2840Show/hide
Query:  SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRT
        SS+  +    +  +  ++ D E+++L    P++   + ILHS +Y + +RL+   ER ++  LL +HP  E KIGCG++ IMV  HP F  SRC F++R 
Subjt:  SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRT

Query:  DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
        DG  +DFSY KC++  I+ KYP YA+ FI  HF++
Subjt:  DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR

AT1G45230.2 Protein of unknown function (DUF3223)6.5e-2840Show/hide
Query:  SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRT
        SS+  +    +  +  ++ D E+++L    P++   + ILHS +Y + +RL+   ER ++  LL +HP  E KIGCG++ IMV  HP F  SRC F++R 
Subjt:  SSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRT

Query:  DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR
        DG  +DFSY KC++  I+ KYP YA+ FI  HF++
Subjt:  DGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKR

AT1G63020.1 nuclear RNA polymerase D1A4.4e-0834.55Show/hide
Query:  DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
        +IE +    K ILHS  Y   E L   DE + V  +L  HP++ +KIG G++ I V +  +   S CF V+R DG + DFSY KC+    +   P     
Subjt:  DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER

Query:  FIREHFKRGS
        +  ++ K G+
Subjt:  FIREHFKRGS

AT2G40030.1 nuclear RNA polymerase D1B1.4e-2542.61Show/hide
Query:  QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNK
        +E+E+L+D+EP++   ++I+H + Y DG+ ++  D+  V+ ++L  HP  E K+G G++ I VD+H  F  SRCFFV+ TDG   DFSY+K L  Y+  K
Subjt:  QEEEMLNDIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNK

Query:  YPSYAERFIREHFKR
        YP  AE FI ++F +
Subjt:  YPSYAERFIREHFKR

AT3G46630.1 Protein of unknown function (DUF3223)2.2e-6057.62Show/hide
Query:  MAASLLLRGHPLLRLG-LRHRG----LCTGIVQVTRRSCCTATAAP---------TPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLN
        M + LLLR  PLLR G L HR     +  GI+   RR  C+    P         +P +G+  +A N+TS +  +      R+++PDYRKWK+ E E+L 
Subjt:  MAASLLLRGHPLLRLG-LRHRG----LCTGIVQVTRRSCCTATAAP---------TPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLN

Query:  DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER
        DIEPI  L KEILHS+RY+DGERL   DE+IV+ +LL +HP+++DKIGCGL+ IMVDRHPQFRHSRC FV+RTDGGWIDFSYQKCLRAY+R+KYPS+AER
Subjt:  DIEPIISLTKEILHSNRYVDGERLTSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAER

Query:  FIREHFKRGS
        FIREHFKR S
Subjt:  FIREHFKRGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTTCTTTGCTACTCCGGGGGCATCCTCTTCTTCGGTTGGGGCTCAGACACCGCGGTCTATGCACTGGAATCGTACAGGTGACTCGCCGGTCTTGCTGTACTGC
GACGGCGGCGCCTACTCCACCAGACGGCAACTTAACATCTGCTGAAAATATTACCTCAGTTTTGAGTTCCAGTGACCCACCCAAGTACTCAAGGTGGGATGAGCCTGATT
ATCGGAAGTGGAAGGACCAGGAAGAGGAAATGCTCAACGACATCGAGCCTATCATATCCCTCACAAAAGAGATCCTCCACTCAAATAGGTATGTGGATGGAGAGCGATTG
ACATCTGTGGACGAGAGAATTGTGGTTAACAGGCTTCTTGCTCATCATCCACATGCCGAAGACAAAATTGGATGTGGACTTGAATCCATCATGGTCGATCGGCATCCCCA
ATTTCGGCACTCAAGATGCTTCTTTGTTATAAGGACTGATGGTGGATGGATTGACTTCTCGTATCAAAAGTGTCTTCGGGCATATATCCGAAATAAGTATCCATCATATG
CAGAGCGGTTTATCCGGGAACATTTCAAACGTGGCAGT
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTTCTTTGCTACTCCGGGGGCATCCTCTTCTTCGGTTGGGGCTCAGACACCGCGGTCTATGCACTGGAATCGTACAGGTGACTCGCCGGTCTTGCTGTACTGC
GACGGCGGCGCCTACTCCACCAGACGGCAACTTAACATCTGCTGAAAATATTACCTCAGTTTTGAGTTCCAGTGACCCACCCAAGTACTCAAGGTGGGATGAGCCTGATT
ATCGGAAGTGGAAGGACCAGGAAGAGGAAATGCTCAACGACATCGAGCCTATCATATCCCTCACAAAAGAGATCCTCCACTCAAATAGGTATGTGGATGGAGAGCGATTG
ACATCTGTGGACGAGAGAATTGTGGTTAACAGGCTTCTTGCTCATCATCCACATGCCGAAGACAAAATTGGATGTGGACTTGAATCCATCATGGTCGATCGGCATCCCCA
ATTTCGGCACTCAAGATGCTTCTTTGTTATAAGGACTGATGGTGGATGGATTGACTTCTCGTATCAAAAGTGTCTTCGGGCATATATCCGAAATAAGTATCCATCATATG
CAGAGCGGTTTATCCGGGAACATTTCAAACGTGGCAGT
Protein sequenceShow/hide protein sequence
MAASLLLRGHPLLRLGLRHRGLCTGIVQVTRRSCCTATAAPTPPDGNLTSAENITSVLSSSDPPKYSRWDEPDYRKWKDQEEEMLNDIEPIISLTKEILHSNRYVDGERL
TSVDERIVVNRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSYAERFIREHFKRGS