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MS008782 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008782
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin-like
Genome locationscaffold4:3683877..3684140
RNA-Seq ExpressionMS008782
SyntenyMS008782
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]7.2e-2974.44Show/hide
Query:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII
        M+R+ K Y P  +LSREQL  IFRNHD D DGRL+  ELTEAFRYIGAFLP YRARHALFH DSDRDGFI EKDFE L+NYAE+R+YT+I
Subjt:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]5.9e-3182.95Show/hide
Query:  MARKGKQY--RPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYT
        MARK K Y  RPKLSREQLS IFRNHD DGDGRL+  ELT AFRYIGAFLPSYRA HAL HTDSD DGFIGEKDFE L+NYAEKRKYT
Subjt:  MARKGKQY--RPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYT

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3283.33Show/hide
Query:  MARKGK--QYRPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII
        MARK K  Q RPKLSREQLS IFRNHD DGDGRL+A ELTEAFRYIGAFLPSYRA HAL +TDSDRDGFIGEKDFESL+NY EKR YTI+
Subjt:  MARKGK--QYRPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-3282.22Show/hide
Query:  MARKGKQY--RPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII
        MARK K Y  RPKLSREQLS IFRNHD DGDGRL+  ELT AFRYIGAFLPSYRA HAL HTDSD DGFIGEKDFE L+NYAEKRKYT+I
Subjt:  MARKGKQY--RPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]1.7e-3078.89Show/hide
Query:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII
        M+RK K Y P  KLSREQL  IFRNHD D DGRL+  ELTEAFRYIGAFLP+YRARHAL H DSDRDGFIGEKDFESL+NYAE+R+YTII
Subjt:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein8.3e-3178.89Show/hide
Query:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII
        M+RK K Y P  KLSREQL  IFRNHD D DGRL+  ELTEAFRYIGAFLP+YRARHAL H DSDRDGFIGEKDFESL+NYAE+R+YTII
Subjt:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII

A0A5A7UY46 Putative calcium-binding protein CML101.2e-1351.28Show/hide
Query:  KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII
        KL +E++ QIFR HD +GDGRL+  EL+ AF   GAF P YRA   LF  D D DGFI E++ E +++YA K KY ++
Subjt:  KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII

A0A5A7VDB9 Putative calcium-binding protein CML273.5e-2974.44Show/hide
Query:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII
        M+R+ K Y P  +LSREQL  IFRNHD D DGRL+  ELTEAFRYIGAFLP YRARHALFH DSDRDGFI EKDFE L+NYAE+R+YT+I
Subjt:  MARKGKQYRP--KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII

A0A5N6RQV2 Uncharacterized protein1.0e-1252Show/hide
Query:  SREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTI
        +R+QL  IFR+HD DGDG+L+  E+  AF Y+G+   SYRA  AL H DSD DG++GE++ + L++YA K  YTI
Subjt:  SREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTI

A5AWP8 Uncharacterized protein2.7e-1350Show/hide
Query:  LSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTI
        L  +QL +IF+ HD +GDG+LN  EL +AF+++GA +P +RA  AL H D+D DG I EK+ + L+ YA K  YTI
Subjt:  LSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTI

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 56.4e-0427.27Show/hide
Query:  KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL
        ++   +L ++F+  D +GDGR+  +EL ++   +G ++P       +   D++ DG +   +FESL
Subjt:  KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL

Q0DJV6 Probable calcium-binding protein CML181.4e-0641.38Show/hide
Query:  QLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDF
        +L Q+FR +D +GDG+++A+EL    R +GA L     R  +   DSDRDGF+   +F
Subjt:  QLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDF

Q39419 Polcalcin Bet v 41.7e-0435Show/hide
Query:  REQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDF
        + +  +IF+  D +GDG+++A EL EA + +G+  P    +H +   D+D DGFI  ++F
Subjt:  REQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML151.7e-0430.88Show/hide
Query:  RPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL
        RP  + ++  ++FR  D +GDGR++  EL   FR +G  +        +   DSD DG+I   +F ++
Subjt:  RPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL

Q8L3R2 Probable calcium-binding protein CML412.8e-0738.46Show/hide
Query:  SREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLL
        S+E+L Q+F + D DGDG+++A EL   F  +G ++    A+ A+   D+D DG +G +DF  L+
Subjt:  SREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLL

Arabidopsis top hitse value%identityAlignment
AT2G43290.1 Calcium-binding EF-hand family protein4.6e-0527.27Show/hide
Query:  KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL
        ++   +L ++F+  D +GDGR+  +EL ++   +G ++P       +   D++ DG +   +FESL
Subjt:  KLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL

AT3G50770.1 calmodulin-like 412.0e-0838.46Show/hide
Query:  SREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLL
        S+E+L Q+F + D DGDG+++A EL   F  +G ++    A+ A+   D+D DG +G +DF  L+
Subjt:  SREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLL

AT3G59440.1 Calcium-binding EF-hand family protein1.0e-0431.67Show/hide
Query:  LSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL
        L ++F+  D +GDGR+  +EL ++   +G F+P       +   D++ DG +   +FESL
Subjt:  LSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL

AT4G12860.1 EF hand calcium-binding protein family3.9e-0429.23Show/hide
Query:  LSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL
        + R +LS++F+  D +GDG++  +EL + F+ +G  +P       +   D + DG +   +F SL
Subjt:  LSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAAATCTTCAGAAACCACGACGACGATGGCGACGGGCGCCTCAACGCCGACGAGCT
CACCGAAGCCTTCCGCTACATCGGTGCATTTCTCCCCTCCTACAGAGCTCGCCACGCCCTTTTCCACACTGATTCCGATCGAGATGGATTCATCGGCGAGAAAGATTTCG
AATCTCTCCTTAATTATGCCGAGAAACGTAAATACACCATCATT
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAAATCTTCAGAAACCACGACGACGATGGCGACGGGCGCCTCAACGCCGACGAGCT
CACCGAAGCCTTCCGCTACATCGGTGCATTTCTCCCCTCCTACAGAGCTCGCCACGCCCTTTTCCACACTGATTCCGATCGAGATGGATTCATCGGCGAGAAAGATTTCG
AATCTCTCCTTAATTATGCCGAGAAACGTAAATACACCATCATT
Protein sequenceShow/hide protein sequence
MARKGKQYRPKLSREQLSQIFRNHDDDGDGRLNADELTEAFRYIGAFLPSYRARHALFHTDSDRDGFIGEKDFESLLNYAEKRKYTII