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MS008783 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008783
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncalmodulin-like
Genome locationscaffold4:3687062..3687325
RNA-Seq ExpressionMS008783
SyntenyMS008783
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]2.0e-2671.11Show/hide
Query:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII
        M R+ K Y P  +LSREQL  IFRNHD D DGRL+  ELTEAFRYIG+FLP YRA HALFH DSDRDGFISE DFE LV YAE+R+Y +I
Subjt:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2879.31Show/hide
Query:  MGRKGKQY--RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKY
        M RK K Y  RPKLSREQLS IFRNHDGDGDGRL+  ELT AFRYIG+FLPSYRA HAL HTDSD DGFI E DFE LV YAEKRKY
Subjt:  MGRKGKQY--RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKY

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2978.89Show/hide
Query:  MGRKGK--QYRPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII
        M RK K  Q RPKLSREQLS IFRNHDGDGDGRL+A ELTEAFRYIG+FLPSYRA HAL +TDSDRDGFI E DFESLV Y EKR Y I+
Subjt:  MGRKGK--QYRPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2977.78Show/hide
Query:  MGRKGKQY--RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII
        M RK K Y  RPKLSREQLS IFRNHDGDGDGRL+  ELT AFRYIG+FLPSYRA HAL HTDSD DGFI E DFE LV YAEKRKY +I
Subjt:  MGRKGKQY--RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]6.8e-2773.33Show/hide
Query:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII
        M RK K Y P  KLSREQL  IFRNHD D DGRL+  ELTEAFRYIG+FLP+YRA HAL H DSDRDGFI E DFESLV YAE+R+Y II
Subjt:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein3.3e-2773.33Show/hide
Query:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII
        M RK K Y P  KLSREQL  IFRNHD D DGRL+  ELTEAFRYIG+FLP+YRA HAL H DSDRDGFI E DFESLV YAE+R+Y II
Subjt:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII

A0A0A0LRC1 Uncharacterized protein7.8e-1351.35Show/hide
Query:  RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEK
        R +LSRE + +IFR HD DGDGRL+ NE+ +AF   GS LP Y+A + + H D + DGFI E + + LV YA+K
Subjt:  RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEK

A0A5A7UY46 Putative calcium-binding protein CML101.2e-1352.56Show/hide
Query:  KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII
        KL +E++ QIFR HD +GDGRL+  EL+ AF   G+F P YRA+  LF  D D DGFISE + E +V YA K KY ++
Subjt:  KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII

A0A5A7VDB9 Putative calcium-binding protein CML279.5e-2771.11Show/hide
Query:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII
        M R+ K Y P  +LSREQL  IFRNHD D DGRL+  ELTEAFRYIG+FLP YRA HALFH DSDRDGFISE DFE LV YAE+R+Y +I
Subjt:  MGRKGKQYRP--KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII

A0A6J1KUW2 calmodulin-like1.0e-1252.78Show/hide
Query:  KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEK
        KLSR Q+ +IF  HD DGDG L+ +ELT+AF + GS +P Y+A + L + D+D DG ISE + E LV YAE+
Subjt:  KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEK

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML181.2e-0537.93Show/hide
Query:  QLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDF
        +L Q+FR +D +GDG+++A EL    R +G+ L        +   DSDRDGF+  ++F
Subjt:  QLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDF

Q39419 Polcalcin Bet v 47.6e-0538.33Show/hide
Query:  REQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDF
        + +  +IF+  D +GDG+++A EL EA + +GS  P     H +   D+D DGFIS  +F
Subjt:  REQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDF

Q6L4D4 Probable calcium-binding protein CML152.6e-0532.35Show/hide
Query:  RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL
        RP  + ++  ++FR  D +GDGR++  EL   FR +G  +     +  +   DSD DG+IS  +F ++
Subjt:  RPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL

Q8L3R2 Probable calcium-binding protein CML411.1e-0637.88Show/hide
Query:  SREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVT
        S+E+L Q+F + D DGDG+++A EL   F  +G ++    A  A+   D+D DG +   DF  L+T
Subjt:  SREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVT

Q8RZB5 Probable calcium-binding protein CML102.2e-0433.87Show/hide
Query:  EQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL
        E++ ++FR  D +GDGR++ +EL   F  +G        +  +   D+D DGFIS  +F +L
Subjt:  EQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein3.5e-0532.26Show/hide
Query:  EQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL
        E+L ++F   D +GDG+++  EL   F+ +G+       +  L   D+DRDG+I+  +F +L
Subjt:  EQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL

AT1G18210.2 Calcium-binding EF-hand family protein3.5e-0532.26Show/hide
Query:  EQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL
        E+L ++F   D +GDG+++  EL   F+ +G+       +  L   D+DRDG+I+  +F +L
Subjt:  EQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL

AT2G43290.1 Calcium-binding EF-hand family protein7.8e-0527.27Show/hide
Query:  KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL
        ++   +L ++F+  D +GDGR+   EL ++   +G ++P    +  +   D++ DG +   +FESL
Subjt:  KLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL

AT3G50770.1 calmodulin-like 417.5e-0837.88Show/hide
Query:  SREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVT
        S+E+L Q+F + D DGDG+++A EL   F  +G ++    A  A+   D+D DG +   DF  L+T
Subjt:  SREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVT

AT4G12860.1 EF hand calcium-binding protein family1.3e-0430.77Show/hide
Query:  LSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL
        + R +LS++F+  D +GDG++  NEL + F+ +G  +P    +  +   D + DG +   +F SL
Subjt:  LSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAGATCTTCAGAAACCACGACGGCGACGGCGACGGGCGCCTCAACGCCAACGAGCT
CACCGAAGCCTTCCGCTACATCGGCTCATTTCTCCCCTCCTACAGAGCTTCCCACGCCCTCTTCCACACCGATTCCGATAGAGATGGATTCATCAGCGAGACAGATTTCG
AATCTCTCGTTACTTATGCCGAGAAACGTAAATACGCCATCATT
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGCAAAGGAAAGCAGTACCGGCCGAAGCTGTCGCGAGAGCAGCTCAGCCAGATCTTCAGAAACCACGACGGCGACGGCGACGGGCGCCTCAACGCCAACGAGCT
CACCGAAGCCTTCCGCTACATCGGCTCATTTCTCCCCTCCTACAGAGCTTCCCACGCCCTCTTCCACACCGATTCCGATAGAGATGGATTCATCAGCGAGACAGATTTCG
AATCTCTCGTTACTTATGCCGAGAAACGTAAATACGCCATCATT
Protein sequenceShow/hide protein sequence
MGRKGKQYRPKLSREQLSQIFRNHDGDGDGRLNANELTEAFRYIGSFLPSYRASHALFHTDSDRDGFISETDFESLVTYAEKRKYAII