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MS008793 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008793
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold4:3737581..3737886
RNA-Seq ExpressionMS008793
SyntenyMS008793
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]3.8e-1351.43Show/hide
Query:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV
        I LI+    +L L S  ++S ++ARL P+++P   N P     KT  T AV PL+S P AF      +  DVE+ GGDFRPTT GHSPGAGHS+AP SH+
Subjt:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV

Query:  DSKIH
        DSKIH
Subjt:  DSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1756.73Show/hide
Query:  MAGINLIAAALLVLALISGSVSRSEARLAPMDHPLDGN-NPISKTTAAVPPLQSSPPAFHRTPVISA-SDVELQGGDFRPTTPGHSPGAGHSLAPASHVD
        M  IN I  A L+L+ I  ++S +  RL P++HP+ GN +     TA V PL S PPAF RT       D E+ GGDFRPTTPGHSPG GHSLAPASHVD
Subjt:  MAGINLIAAALLVLALISGSVSRSEARLAPMDHPLDGN-NPISKTTAAVPPLQSSPPAFHRTPVISA-SDVELQGGDFRPTTPGHSPGAGHSLAPASHVD

Query:  SKIH
        SKIH
Subjt:  SKIH

KAG6608491.1 hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1350Show/hide
Query:  MAGINLIAAALLVLALISGSVSRSE------ARLAPM--DHPLDGNNPISKTTAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLA
        MAGINLI+AA   + L+  S+  +        RL PM  +HP                L S P +FH +P I+A+DV++ GGDFRPTTPGHSPGAGH LA
Subjt:  MAGINLIAAALLVLALISGSVSRSE------ARLAPM--DHPLDGNNPISKTTAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLA

Query:  PASHVDSKIH
        P SHVDSKIH
Subjt:  PASHVDSKIH

KAG7024239.1 Polyadenylate-binding protein RBP47C, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1354.44Show/hide
Query:  ALLVLALISGSVSRSEARLAPMDHPLDGNNPIS-KTTAAVPPLQSSPPAFHRTPVISA-SDVELQGGDFRPTTPGHSPGAGHSLAPASHV
        A L+L+ I  ++S +  RL P++HP+ GN+      TA V PL S PPAF RT       D E+ GGDFRPTTPGHSPG GHSLAPASH+
Subjt:  ALLVLALISGSVSRSEARLAPMDHPLDGNNPIS-KTTAAVPPLQSSPPAFHRTPVISA-SDVELQGGDFRPTTPGHSPGAGHSLAPASHV

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]1.5e-1453.33Show/hide
Query:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV
        I LI+    +L L S  ++S ++ARL PM++P   N P     KT  T AV PL+S P AF      +  DVE+ GGDFRPTTPGHSPGAGHS+AP SH+
Subjt:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV

Query:  DSKIH
        DSKIH
Subjt:  DSKIH

TrEMBL top hitse value%identityAlignment
A0A0A0L3I5 Uncharacterized protein2.4e-1350Show/hide
Query:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLD------GNNPISKTTAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASH
        I LI+  + +L L S   VS ++AR+ P  + LD        +P  + T AV PL+S P AF R    + S+ E+ GGDFRPTTPGHSPGAGHS+AP SH
Subjt:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLD------GNNPISKTTAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASH

Query:  VDSKIH
        +DSKIH
Subjt:  VDSKIH

A0A5A7VEP2 Uncharacterized protein1.8e-1351.43Show/hide
Query:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV
        I LI+    +L L S  ++S ++ARL P+++P   N P     KT  T AV PL+S P AF      +  DVE+ GGDFRPTT GHSPGAGHS+AP SH+
Subjt:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV

Query:  DSKIH
        DSKIH
Subjt:  DSKIH

A0A5D3D9H8 Uncharacterized protein7.4e-1553.33Show/hide
Query:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV
        I LI+    +L L S  ++S ++ARL PM++P   N P     KT  T AV PL+S P AF      +  DVE+ GGDFRPTTPGHSPGAGHS+AP SH+
Subjt:  INLIAAALLVLALISG-SVSRSEARLAPMDHPLDGNNPIS---KT--TAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHV

Query:  DSKIH
        DSKIH
Subjt:  DSKIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATCAATCTCATCGCCGCCGCCCTGCTCGTCCTTGCTCTTATCTCCGGCAGTGTATCACGCAGCGAAGCAAGGTTGGCGCCCATGGATCACCCCCTCGACGG
CAATAATCCAATCTCCAAAACTACCGCCGCCGTCCCTCCTCTCCAGTCCTCCCCACCGGCATTCCACCGCACTCCGGTCATCTCCGCCAGCGACGTCGAGCTCCAAGGCG
GTGACTTCCGACCCACCACCCCCGGCCACAGTCCTGGCGCCGGCCACTCCCTCGCCCCGGCCAGCCACGTGGATTCCAAAATCCAT
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATCAATCTCATCGCCGCCGCCCTGCTCGTCCTTGCTCTTATCTCCGGCAGTGTATCACGCAGCGAAGCAAGGTTGGCGCCCATGGATCACCCCCTCGACGG
CAATAATCCAATCTCCAAAACTACCGCCGCCGTCCCTCCTCTCCAGTCCTCCCCACCGGCATTCCACCGCACTCCGGTCATCTCCGCCAGCGACGTCGAGCTCCAAGGCG
GTGACTTCCGACCCACCACCCCCGGCCACAGTCCTGGCGCCGGCCACTCCCTCGCCCCGGCCAGCCACGTGGATTCCAAAATCCAT
Protein sequenceShow/hide protein sequence
MAGINLIAAALLVLALISGSVSRSEARLAPMDHPLDGNNPISKTTAAVPPLQSSPPAFHRTPVISASDVELQGGDFRPTTPGHSPGAGHSLAPASHVDSKIH