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MS008801 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008801
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor MYB44-like
Genome locationscaffold4:3795026..3795355
RNA-Seq ExpressionMS008801
SyntenyMS008801
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141241.1 transcription factor MYB73 [Cucumis sativus]1.8e-5698.1Show/hide
Query:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS
        PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAI+AAH+RYGNRWATIARLLPGRTDNAVKNHWNS
Subjt:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS

Query:  TLKRR
        TLKRR
Subjt:  TLKRR

XP_008452503.1 PREDICTED: transcriptional activator Myb-like [Cucumis melo]1.8e-5698.1Show/hide
Query:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS
        PDKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNS
Subjt:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS

Query:  TLKRR
        TLKRR
Subjt:  TLKRR

XP_022139700.1 transcription factor MYB44-like [Momordica charantia]9.9e-60100Show/hide
Query:  ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK
        ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK
Subjt:  ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK

Query:  NHWNSTLKRR
        NHWNSTLKRR
Subjt:  NHWNSTLKRR

XP_023525388.1 transcription factor MYB44-like [Cucurbita pepo subsp. pepo]3.9e-5695.37Show/hide
Query:  AGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNH
        +G  DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNH
Subjt:  AGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNH

Query:  WNSTLKRR
        WNSTLKRR
Subjt:  WNSTLKRR

XP_038899055.1 transcription factor MYB44-like [Benincasa hispida]1.8e-5698.1Show/hide
Query:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS
        PDKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNS
Subjt:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS

Query:  TLKRR
        TLKRR
Subjt:  TLKRR

TrEMBL top hitse value%identityAlignment
A0A0A0L4S7 Uncharacterized protein8.5e-5798.1Show/hide
Query:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS
        PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAI+AAH+RYGNRWATIARLLPGRTDNAVKNHWNS
Subjt:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS

Query:  TLKRR
        TLKRR
Subjt:  TLKRR

A0A1S3BV53 transcriptional activator Myb-like8.5e-5798.1Show/hide
Query:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS
        PDKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNS
Subjt:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS

Query:  TLKRR
        TLKRR
Subjt:  TLKRR

A0A5A7V9U0 Transcriptional activator Myb-like8.5e-5798.1Show/hide
Query:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS
        PDKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNHWNS
Subjt:  PDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNS

Query:  TLKRR
        TLKRR
Subjt:  TLKRR

A0A6J1CD16 transcription factor MYB44-like4.8e-60100Show/hide
Query:  ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK
        ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK
Subjt:  ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK

Query:  NHWNSTLKRR
        NHWNSTLKRR
Subjt:  NHWNSTLKRR

A0A6J1FM32 transcription factor MYB44-like1.9e-5695.37Show/hide
Query:  AGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNH
        +G  DKIKGPWSAEEDR+LTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAH+RYGNRWATIARLLPGRTDNAVKNH
Subjt:  AGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNH

Query:  WNSTLKRR
        WNSTLKRR
Subjt:  WNSTLKRR

SwissProt top hitse value%identityAlignment
O04192 Transcription factor MYB255.0e-3862.73Show/hide
Query:  ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK
        A  GG  K+KGPW  E+D  LTRLV+  GPRNW+LISR + GRSGKSCRLRWCNQL P ++ +PFS  E+  I++A A  GN+W+ IA+LLPGRTDNA+K
Subjt:  ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVK

Query:  NHWNSTLKRR
        NHWNS L+R+
Subjt:  NHWNSTLKRR

O23160 Transcription factor MYB731.0e-4374.04Show/hide
Query:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST
        ++IKGPWS EED +L RLV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR FS  ED+ II AHAR+GN+WATI+RLL GRTDNA+KNHWNST
Subjt:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

Q42575 Transcription factor MYB14.5e-3966.36Show/hide
Query:  GGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHW
        G  D++KGPWS EED +L+ LV+R G RNWS I+R + GRSGKSCRLRWCNQL P +    F+  ED AIIAAHA +GN+WA IA+LLPGRTDNA+KNHW
Subjt:  GGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHW

Query:  NSTLKRR
        NS L+RR
Subjt:  NSTLKRR

Q9FDW1 Transcription factor MYB441.4e-4375Show/hide
Query:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST
        D+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEHRPFS  ED+ I  AHA++GN+WATIARLL GRTDNAVKNHWNST
Subjt:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

Q9SN12 Transcription factor MYB779.4e-4575Show/hide
Query:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST
        D++KGPWS EED  L R+VE+YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEHRPFSP ED+ I+ A A++GN+WATIARLL GRTDNAVKNHWNST
Subjt:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

Arabidopsis top hitse value%identityAlignment
AT2G23290.1 myb domain protein 705.6e-4575Show/hide
Query:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST
        D+IKGPWS EED +L  LV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR F+  EDD II AHAR+GN+WATIARLL GRTDNA+KNHWNST
Subjt:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

AT3G50060.1 myb domain protein 776.7e-4675Show/hide
Query:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST
        D++KGPWS EED  L R+VE+YGPRNWS IS+ + GRSGKSCRLRWCNQL P VEHRPFSP ED+ I+ A A++GN+WATIARLL GRTDNAVKNHWNST
Subjt:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

AT3G55730.1 myb domain protein 1093.8e-4168.93Show/hide
Query:  KIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTL
        K+KGPWS EED +LT+LV + GPRNWSLI+R + GRSGKSCRLRWCNQL P ++ +PFS  ED  II+AHA +GN+WA IA+LL GRTDNA+KNHWNSTL
Subjt:  KIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTL

Query:  KRR
        +R+
Subjt:  KRR

AT4G37260.1 myb domain protein 737.4e-4574.04Show/hide
Query:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST
        ++IKGPWS EED +L RLV+++GPRNWSLIS+ + GRSGKSCRLRWCNQL P VEHR FS  ED+ II AHAR+GN+WATI+RLL GRTDNA+KNHWNST
Subjt:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR

AT5G67300.1 myb domain protein r19.6e-4575Show/hide
Query:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST
        D+IKGPWS EED  L RLV +YGPRNW++IS+ + GRSGKSCRLRWCNQL P VEHRPFS  ED+ I  AHA++GN+WATIARLL GRTDNAVKNHWNST
Subjt:  DKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNST

Query:  LKRR
        LKR+
Subjt:  LKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTACGGCCGGCGGCCCAGATAAAATCAAGGGCCCATGGAGCGCCGAAGAGGATCGGATCCTGACCCGACTCGTCGAGCGTTACGGCCCGAGGAATTGGTCCTTGATTAG
CCGTTATGTAAAGGGGCGGTCGGGGAAATCGTGCCGGCTCCGGTGGTGCAACCAGCTCTGCCCCGGCGTCGAGCACCGCCCCTTCTCTCCGGCCGAGGATGACGCCATCA
TCGCCGCCCACGCCCGCTACGGAAACCGGTGGGCCACCATTGCCCGCTTGCTGCCCGGTCGGACGGACAATGCCGTCAAGAATCACTGGAACTCCACGCTCAAGCGGCGA
mRNA sequenceShow/hide mRNA sequence
GCTACGGCCGGCGGCCCAGATAAAATCAAGGGCCCATGGAGCGCCGAAGAGGATCGGATCCTGACCCGACTCGTCGAGCGTTACGGCCCGAGGAATTGGTCCTTGATTAG
CCGTTATGTAAAGGGGCGGTCGGGGAAATCGTGCCGGCTCCGGTGGTGCAACCAGCTCTGCCCCGGCGTCGAGCACCGCCCCTTCTCTCCGGCCGAGGATGACGCCATCA
TCGCCGCCCACGCCCGCTACGGAAACCGGTGGGCCACCATTGCCCGCTTGCTGCCCGGTCGGACGGACAATGCCGTCAAGAATCACTGGAACTCCACGCTCAAGCGGCGA
Protein sequenceShow/hide protein sequence
ATAGGPDKIKGPWSAEEDRILTRLVERYGPRNWSLISRYVKGRSGKSCRLRWCNQLCPGVEHRPFSPAEDDAIIAAHARYGNRWATIARLLPGRTDNAVKNHWNSTLKRR