; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008836 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008836
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCOP9 signalosome complex subunit 4
Genome locationscaffold4:4135974..4140036
RNA-Seq ExpressionMS008836
SyntenyMS008836
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR000717 - Proteasome component (PCI) domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040134 - 26S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147790.1 COP9 signalosome complex subunit 4 [Cucumis sativus]2.2e-17497.9Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYKHILYNVLSSND +QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+ Q+EIAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEE+DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

XP_022138952.1 COP9 signalosome complex subunit 4 [Momordica charantia]2.1e-177100Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

XP_022937018.1 COP9 signalosome complex subunit 4 [Cucurbita moschata]6.9e-17397.58Show/hide
Query:  SAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKL
        SAFASASAISDQRQKIEQYK+ILYNVLSSND++QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+TQK+IAHYILAQIQPRVVSFEEQVLIIREKL
Subjt:  SAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKL

Query:  AELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYD
        AELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYD
Subjt:  AELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYD

Query:  ISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRA
        ISQIEKRQIGDEE++EEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLDRA
Subjt:  ISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRA

Query:  MIEHNLLSASKLYTNISFEELGTLLGIPPHK
        MIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  MIEHNLLSASKLYTNISFEELGTLLGIPPHK

XP_022975496.1 COP9 signalosome complex subunit 4 [Cucurbita maxima]6.3e-17497.6Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYK+ILYNVLSSND++QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+TQK+IAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEE++EEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

XP_038905934.1 COP9 signalosome complex subunit 4 [Benincasa hispida]1.1e-17397.6Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYKHILYNVLSSND +QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+TQ+EIAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEE+DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFA+ELKPHQ+ALL DNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

TrEMBL top hitse value%identityAlignment
A0A0A0LG28 PCI domain-containing protein1.0e-17497.9Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYKHILYNVLSSND +QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+ Q+EIAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEE+DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

A0A1S3CRN4 COP9 signalosome complex subunit 41.0e-17497.9Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYKHILYNVLSSND +QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+ Q+EIAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEE+DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

A0A5A7TJ03 COP9 signalosome complex subunit 41.0e-17497.9Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYKHILYNVLSSND +QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+ Q+EIAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEE+DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

A0A6J1CCN1 COP9 signalosome complex subunit 41.0e-177100Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

A0A6J1IEE2 COP9 signalosome complex subunit 43.0e-17497.6Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        MESAFASASAISDQRQKIEQYK+ILYNVLSSND++QAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEG+TQK+IAHYILAQIQPRVVSFEEQVLIIRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        YDISQIEKRQIGDEE++EEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQ+ALLPDNFTVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

SwissProt top hitse value%identityAlignment
O88544 COP9 signalosome complex subunit 44.6e-7952.05Show/hide
Query:  QYKHILYNVLSSNDTIQ---AKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA
        +Y+ IL   +  + T Q    K F++  +++ V LV+SRQLL      L  L   T KE+ H+ L +IQPRV+SFEEQV  IR+ LA +YE E+ W  AA
Subjt:  QYKHILYNVLSSNDTIQ---AKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA

Query:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL
        Q+L GI L++G +  +  Y+L   ++IARLYLEDDD V AEA+IN+AS L + S +E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E  
Subjt:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL

Query:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT
          EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY 
Subjt:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT

Query:  NISFEELGTLLGIPPHK
        NI+FEELG LL IP  K
Subjt:  NISFEELGTLLGIPPHK

Q3SZA0 COP9 signalosome complex subunit 44.6e-7952.68Show/hide
Query:  QYKHILYNV--LSSNDTIQA-KKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA
        +Y+ IL     LS  + ++A K F++  +++ V LV+SRQLL      L  L   T KEI H+ L +IQPRV+SFEEQV  IR+ LA +YE E+ W  AA
Subjt:  QYKHILYNV--LSSNDTIQA-KKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA

Query:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL
        Q+L GI L++G +  +  Y+L   ++IARLYLEDDD V AEA+IN+AS L + S +E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E  
Subjt:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL

Query:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT
          EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY 
Subjt:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT

Query:  NISFEELGTLLGIPPHK
        NI+FEELG LL IP  K
Subjt:  NISFEELGTLLGIPPHK

Q68FS2 COP9 signalosome complex subunit 42.7e-7951.74Show/hide
Query:  QYKHILYNVLSSNDTIQ---AKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA
        +Y+ IL   +  + T Q    K F++  +++ V LV+SRQLL      L  L   T KE+ H+ L ++QPRV+SFEEQV  IR++LA +YE E+ W  AA
Subjt:  QYKHILYNVLSSNDTIQ---AKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA

Query:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL
        Q+L GI L++G +  +  Y+L   ++IARLYLEDDD V AEA+IN+AS L + S +E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E  
Subjt:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL

Query:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT
          EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY 
Subjt:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT

Query:  NISFEELGTLLGIPPHK
        NI+FEELG LL IP  K
Subjt:  NISFEELGTLLGIPPHK

Q6P0H6 COP9 signalosome complex subunit 42.7e-7952.05Show/hide
Query:  QYKHILYNVLSSNDTIQ---AKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA
        +Y+ IL   L   D  Q    K F++  +++ V LV+SRQLL      L  L  D  K + H+ L +IQPRV+SFEEQV  IR+ LA +YE ++ W  AA
Subjt:  QYKHILYNVLSSNDTIQ---AKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAA

Query:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL
        Q+L GI L++G +  +  Y+L   ++IARLYLEDDD V AEA+IN+AS L + S +E L + YKVCYAR+LD +RKF+EAA RY ++S    + I  E  
Subjt:  QMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEL

Query:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT
          EAL+ AL     CTILA+AG QRSR+LATL+KDERC +L  Y IL+K+YL+RI+R  ++  FA  L PHQKA   D  ++LDRA+IEHNLLSASKLY 
Subjt:  DEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYT

Query:  NISFEELGTLLGIPPHK
        NI+FEELG LL IPP K
Subjt:  NISFEELGTLLGIPPHK

Q8L5U0 COP9 signalosome complex subunit 42.4e-15284.08Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        M+ A  +ASAI DQRQKIEQYK IL +VLSSND +QA++FIDH LSD+VPLVVSRQLLQ+ AQELG+LE +TQKEIA + L QIQPRVVSFEEQ L+IRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLA LYESEQ+WSKAAQMLSGIDLDSGMR +D++++LSKC+QIARLYLEDDDAVNAEAFINKASFLVSNSQ+EVLNLQYKVCYARILD+KRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        Y ISQIE+RQIGDEE+DE ALEQALSAAVTCTILA AGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILR+PEIDAF+EEL+PHQKA LPD  TVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNI F+ELGTLL I P K
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK

Arabidopsis top hitse value%identityAlignment
AT5G42970.1 Proteasome component (PCI) domain protein1.7e-15384.08Show/hide
Query:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE
        M+ A  +ASAI DQRQKIEQYK IL +VLSSND +QA++FIDH LSD+VPLVVSRQLLQ+ AQELG+LE +TQKEIA + L QIQPRVVSFEEQ L+IRE
Subjt:  MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIRE

Query:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY
        KLA LYESEQ+WSKAAQMLSGIDLDSGMR +D++++LSKC+QIARLYLEDDDAVNAEAFINKASFLVSNSQ+EVLNLQYKVCYARILD+KRKFLEAALRY
Subjt:  KLAELYESEQQWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRY

Query:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD
        Y ISQIE+RQIGDEE+DE ALEQALSAAVTCTILA AGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILR+PEIDAF+EEL+PHQKA LPD  TVLD
Subjt:  YDISQIEKRQIGDEELDEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLD

Query:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK
        RAMIEHNLLSASKLYTNI F+ELGTLL I P K
Subjt:  RAMIEHNLLSASKLYTNISFEELGTLLGIPPHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCGCCTTTGCGAGCGCCTCTGCCATCTCAGACCAGAGGCAGAAGATCGAACAGTACAAGCACATCCTGTATAATGTTTTGTCATCAAATGATACAATTCAAGC
CAAGAAGTTTATTGATCACACATTATCCGATGAAGTTCCGCTTGTAGTATCGCGGCAGCTTTTGCAGACTCTTGCGCAAGAGTTGGGGAAATTGGAGGGGGACACTCAGA
AAGAGATTGCCCATTATATCCTCGCTCAGATTCAGCCGCGCGTCGTCTCTTTCGAGGAGCAGGTGTTGATTATACGGGAGAAGCTTGCTGAATTGTATGAATCCGAGCAG
CAATGGTCAAAAGCTGCTCAGATGCTTAGTGGCATTGATCTAGATTCTGGAATGAGAGTGATTGATGAGTCATACCGGTTGTCAAAATGTGTTCAAATTGCTCGGTTATA
CCTCGAGGATGATGACGCTGTTAATGCTGAGGCTTTTATCAATAAAGCTTCATTCCTGGTTAGCAATAGTCAGCATGAAGTCCTCAATTTGCAATACAAGGTTTGTTATG
CAAGGATCTTAGACTTAAAAAGGAAGTTCTTGGAAGCAGCACTGCGTTATTATGATATATCTCAAATTGAAAAGAGACAAATAGGAGATGAAGAGCTCGACGAAGAAGCA
CTAGAACAAGCTTTATCTGCTGCAGTGACATGTACAATATTGGCTGCTGCTGGTCCACAGAGATCCCGGGTTCTTGCCACATTATACAAAGATGAGCGTTGCTCAAAGTT
GAAAATCTATCCAATACTGCAAAAGGTTTACTTGGAGAGAATTTTGAGAAAACCAGAAATTGATGCGTTTGCTGAAGAGCTAAAGCCTCACCAGAAAGCCCTTCTGCCAG
ATAATTTTACTGTGCTGGATCGTGCTATGATTGAGCATAATCTTCTCAGTGCAAGCAAACTTTACACAAATATAAGCTTTGAGGAATTAGGCACCTTGCTGGGTATTCCT
CCTCATAAGGTG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCGCCTTTGCGAGCGCCTCTGCCATCTCAGACCAGAGGCAGAAGATCGAACAGTACAAGCACATCCTGTATAATGTTTTGTCATCAAATGATACAATTCAAGC
CAAGAAGTTTATTGATCACACATTATCCGATGAAGTTCCGCTTGTAGTATCGCGGCAGCTTTTGCAGACTCTTGCGCAAGAGTTGGGGAAATTGGAGGGGGACACTCAGA
AAGAGATTGCCCATTATATCCTCGCTCAGATTCAGCCGCGCGTCGTCTCTTTCGAGGAGCAGGTGTTGATTATACGGGAGAAGCTTGCTGAATTGTATGAATCCGAGCAG
CAATGGTCAAAAGCTGCTCAGATGCTTAGTGGCATTGATCTAGATTCTGGAATGAGAGTGATTGATGAGTCATACCGGTTGTCAAAATGTGTTCAAATTGCTCGGTTATA
CCTCGAGGATGATGACGCTGTTAATGCTGAGGCTTTTATCAATAAAGCTTCATTCCTGGTTAGCAATAGTCAGCATGAAGTCCTCAATTTGCAATACAAGGTTTGTTATG
CAAGGATCTTAGACTTAAAAAGGAAGTTCTTGGAAGCAGCACTGCGTTATTATGATATATCTCAAATTGAAAAGAGACAAATAGGAGATGAAGAGCTCGACGAAGAAGCA
CTAGAACAAGCTTTATCTGCTGCAGTGACATGTACAATATTGGCTGCTGCTGGTCCACAGAGATCCCGGGTTCTTGCCACATTATACAAAGATGAGCGTTGCTCAAAGTT
GAAAATCTATCCAATACTGCAAAAGGTTTACTTGGAGAGAATTTTGAGAAAACCAGAAATTGATGCGTTTGCTGAAGAGCTAAAGCCTCACCAGAAAGCCCTTCTGCCAG
ATAATTTTACTGTGCTGGATCGTGCTATGATTGAGCATAATCTTCTCAGTGCAAGCAAACTTTACACAAATATAAGCTTTGAGGAATTAGGCACCTTGCTGGGTATTCCT
CCTCATAAGGTG
Protein sequenceShow/hide protein sequence
MESAFASASAISDQRQKIEQYKHILYNVLSSNDTIQAKKFIDHTLSDEVPLVVSRQLLQTLAQELGKLEGDTQKEIAHYILAQIQPRVVSFEEQVLIIREKLAELYESEQ
QWSKAAQMLSGIDLDSGMRVIDESYRLSKCVQIARLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLQYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEELDEEA
LEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFEELGTLLGIP
PHKV