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MS008855 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008855
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSerine palmitoyltransferase 1
Genome locationscaffold4:4295068..4295999
RNA-Seq ExpressionMS008855
SyntenyMS008855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149981.1 uncharacterized protein LOC111018241 [Momordica charantia]5.0e-6399.22Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADL-EKPKKNGWWRRSNWAFLNEPPVT
        VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADL EKPKKNGWWRRSNWAFLNEPPVT
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADL-EKPKKNGWWRRSNWAFLNEPPVT

Query:  EGSGNRYVSQFHVANVAASKFGRGGVSA
        EGSGNRYVSQFHVANVAASKFGRGGVSA
Subjt:  EGSGNRYVSQFHVANVAASKFGRGGVSA
XP_022940046.1 uncharacterized protein LOC111445795 [Cucurbita moschata]9.1e-4981.4Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV
        VSHRRNKSLT+EEIEAFWKTKKQL EEHL+AIL  P +S +EIKKVEFGG NLQRS+SVPP NT K F+ MESEA L+ KPKKNGWWRRSNWAFLNEPPV
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV

Query:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
         EGSGN YVSQFHVANVAAS+ GRGGV A
Subjt:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
XP_022982140.1 uncharacterized protein LOC111481065 [Cucurbita maxima]4.5e-4880.62Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV
        VSHRRNKSLT+EEIEAFWKTKKQL EEHL+AIL  P +S +EIKKVEFGG NLQRS+SVPP NT K  + MESEA L+ KPKKNGWWRRSNWAFLNEPPV
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV

Query:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
         EGSGN YVSQFHVANVAAS+ GRGGV A
Subjt:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
XP_023525160.1 uncharacterized protein LOC111788844 [Cucurbita pepo subsp. pepo]2.6e-4880.62Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV
        VSHRRNKSLT+EEIEAFWKTKKQL EEHL+AIL  P +S +EIKKVEFGG NLQRS+SVPP NT K F+ MESEA L+ KPKKNGWWRRSNWAFLNEPPV
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV

Query:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
         EGSGN YVSQFHVANV+AS+ GRGGV A
Subjt:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
XP_038898962.1 uncharacterized protein LOC120086405 [Benincasa hispida]6.1e-4576.38Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADLEKPKKNGWWRRSNWAFLNEPPVTE
        VSHRRNKSLT+EEIEAFWKTKKQ+ EEHL+AIL  P E+S+E KK+E GGNLQRS S+PP  T K  + MESE +LEKPKKN WWRRSNWAFLNEPP TE
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADLEKPKKNGWWRRSNWAFLNEPPVTE

Query:  GSGNRYVSQFHVANVAASKFGRGGVSA
        GSGN YVSQFHVAN+AAS+ G GGVSA
Subjt:  GSGNRYVSQFHVANVAASKFGRGGVSA
TrEMBL top hitse value%identityAlignment
A0A0A0LDC2 Uncharacterized protein1.4e-4272.66Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMA-MESEADLEKPKKNGWWRRSNWAFLNEPPVT
        VSHRRNKSLT+EEIEAFWKTKKQ+ EEHL+AIL  P E+ +E +K   G NLQRS S+PP NT K     M+SE +LEKP+KN WWRRSNWAFLNEPP T
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMA-MESEADLEKPKKNGWWRRSNWAFLNEPPVT

Query:  EGSGNRYVSQFHVANVAASKFGRGGVSA
        EGSGN YVSQFHVAN+AAS+ GRGGVSA
Subjt:  EGSGNRYVSQFHVANVAASKFGRGGVSA
A0A5D3D820 Putative DNA polymerase epsilon catalytic subunit A1.8e-4271.88Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMA-MESEADLEKPKKNGWWRRSNWAFLNEPPVT
        VSHRRNKSLT+EEIEAFWKTKKQ+ EEHL+AIL  P E+ +E +K   G NLQRS S+PP NT K  +  ++SE +LEKP+KN WWRRSNWAFLNEPP T
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMA-MESEADLEKPKKNGWWRRSNWAFLNEPPVT

Query:  EGSGNRYVSQFHVANVAASKFGRGGVSA
        EGSGN YVSQFHVAN+AAS+ GRGGVSA
Subjt:  EGSGNRYVSQFHVANVAASKFGRGGVSA
A0A6J1DA26 uncharacterized protein LOC1110182412.4e-6399.22Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADL-EKPKKNGWWRRSNWAFLNEPPVT
        VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADL EKPKKNGWWRRSNWAFLNEPPVT
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADL-EKPKKNGWWRRSNWAFLNEPPVT

Query:  EGSGNRYVSQFHVANVAASKFGRGGVSA
        EGSGNRYVSQFHVANVAASKFGRGGVSA
Subjt:  EGSGNRYVSQFHVANVAASKFGRGGVSA
A0A6J1FHE8 uncharacterized protein LOC1114457954.4e-4981.4Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV
        VSHRRNKSLT+EEIEAFWKTKKQL EEHL+AIL  P +S +EIKKVEFGG NLQRS+SVPP NT K F+ MESEA L+ KPKKNGWWRRSNWAFLNEPPV
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV

Query:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
         EGSGN YVSQFHVANVAAS+ GRGGV A
Subjt:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
A0A6J1J1T2 uncharacterized protein LOC1114810652.2e-4880.62Show/hide
Query:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV
        VSHRRNKSLT+EEIEAFWKTKKQL EEHL+AIL  P +S +EIKKVEFGG NLQRS+SVPP NT K  + MESEA L+ KPKKNGWWRRSNWAFLNEPPV
Subjt:  VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGG-NLQRSNSVPPLNTNKSFMAMESEADLE-KPKKNGWWRRSNWAFLNEPPV

Query:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
         EGSGN YVSQFHVANVAAS+ GRGGV A
Subjt:  TEGSGNRYVSQFHVANVAASKFGRGGVSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19530.1 unknown protein7.0e-1543.97Show/hide
Query:  SHRRNKSLTREEIEAFWKTKKQ-LEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADLEKPKKNGWWRRSNWAFLNEPPVTE
        S RR KSLTREEI+ FWKTKK+  EEEH++A  +   +   + +  E         SV  L  N+S             K +GWWR++ WAFLNEP   E
Subjt:  SHRRNKSLTREEIEAFWKTKKQ-LEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADLEKPKKNGWWRRSNWAFLNEPPVTE

Query:  GSGNRYVSQFHVANVA
        G  N YVSQF VA++A
Subjt:  GSGNRYVSQFHVANVA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGAGTCACCGGAGGAATAAATCATTGACGAGGGAAGAGATTGAAGCGTTTTGGAAAACGAAGAAACAGTTGGAGGAAGAACATCTGAAAGCCATTTTAAGAGATCCATT
GGAGAGCTCTGATGAAATTAAAAAGGTGGAATTTGGTGGAAATCTTCAGAGATCGAATTCTGTGCCTCCATTAAATACAAATAAGAGTTTCATGGCCATGGAATCTGAAG
CTGACTTAGAGAAGCCCAAGAAAAATGGCTGGTGGAGAAGGAGCAACTGGGCATTTCTAAACGAACCGCCTGTGACAGAAGGATCTGGTAACAGGTACGTATCGCAGTTC
CACGTGGCAAACGTGGCGGCTTCCAAATTCGGTCGCGGTGGAGTCAGTGCT
mRNA sequenceShow/hide mRNA sequence
GTGAGTCACCGGAGGAATAAATCATTGACGAGGGAAGAGATTGAAGCGTTTTGGAAAACGAAGAAACAGTTGGAGGAAGAACATCTGAAAGCCATTTTAAGAGATCCATT
GGAGAGCTCTGATGAAATTAAAAAGGTGGAATTTGGTGGAAATCTTCAGAGATCGAATTCTGTGCCTCCATTAAATACAAATAAGAGTTTCATGGCCATGGAATCTGAAG
CTGACTTAGAGAAGCCCAAGAAAAATGGCTGGTGGAGAAGGAGCAACTGGGCATTTCTAAACGAACCGCCTGTGACAGAAGGATCTGGTAACAGGTACGTATCGCAGTTC
CACGTGGCAAACGTGGCGGCTTCCAAATTCGGTCGCGGTGGAGTCAGTGCT
Protein sequenceShow/hide protein sequence
VSHRRNKSLTREEIEAFWKTKKQLEEEHLKAILRDPLESSDEIKKVEFGGNLQRSNSVPPLNTNKSFMAMESEADLEKPKKNGWWRRSNWAFLNEPPVTEGSGNRYVSQF
HVANVAASKFGRGGVSA