; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008861 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008861
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L31
Genome locationscaffold4:4330876..4331461
RNA-Seq ExpressionMS008861
SyntenyMS008861
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002150 - Ribosomal protein L31
IPR034704 - L28p-like
IPR042105 - Ribosomal protein L31 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466538.1 PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo]2.1e-6685.03Show/hide
Query:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ
        MS+W  DKALK SS      P+YP S   NAAMALNLTNSF  LQR ISPAVAP K KE GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ
Subjt:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ

Query:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        KEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Subjt:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

XP_022136375.1 LOW QUALITY PROTEIN: 50S ribosomal protein L31, chloroplastic [Momordica charantia]1.7e-8498.17Show/hide
Query:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSFLQRRISPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEY
        MSEWPCDKALKNSSPNSALPPTYP SSHPNAAM LNLTNSFLQRRI PAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEY
Subjt:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSFLQRRISPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEY

Query:  SVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        SVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
Subjt:  SVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

XP_022981730.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]3.3e-6788.51Show/hide
Query:  SALPPTYPSSHPNAAMALNLTNSFLQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSR
        S LPPTYP     AAMALNLTNSFLQR  SPA+AP K KE GAR +RPVVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSR
Subjt:  SALPPTYPSSHPNAAMALNLTNSFLQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSR

Query:  SALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        SALL+DADQVEKFRKKFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  SALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

XP_023523361.1 50S ribosomal protein L31, chloroplastic-like [Cucurbita pepo subsp. pepo]2.0e-6987.66Show/hide
Query:  KNSSPNSALPPTYPSSHPNAAMALNLTNSFLQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHP
        +NSSP S LPPTYP     AAMALNLTNSFLQR  SPA+AP K KE GAR +RPVVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHP
Subjt:  KNSSPNSALPPTYPSSHPNAAMALNLTNSFLQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHP

Query:  FYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        FYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  FYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

XP_038896266.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida]1.2e-6483.23Show/hide
Query:  MSEWPCDKALKNSSPNSALPPTYPSSH-PNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ
        MS W  DKALKNSS      P+YP S   NAAMALNLTNSF  LQR  S AVAP K KE GAR+HRPVVTCRKKDLHPQFYED+KVYCNGELVMTTGGTQ
Subjt:  MSEWPCDKALKNSSPNSALPPTYPSSH-PNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ

Query:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        KEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEI+LPTK+KS GKGKKK
Subjt:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

TrEMBL top hitse value%identityAlignment
A0A1S3CRJ2 50S ribosomal protein L31, chloroplastic1.0e-6685.03Show/hide
Query:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ
        MS+W  DKALK SS      P+YP S   NAAMALNLTNSF  LQR ISPAVAP K KE GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ
Subjt:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ

Query:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        KEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Subjt:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

A0A5A7TJN6 50S ribosomal protein L31, chloroplastic9.6e-6586.34Show/hide
Query:  DKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVD
        DKALK SS      P+YP S   NAAMALNLTNSF  LQR ISPAVAP K KE GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVD
Subjt:  DKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVD

Query:  VWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        VWSGNHPFYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Subjt:  VWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

A0A6J1C3Q3 50S ribosomal protein L31, chloroplastic8.3e-8598.17Show/hide
Query:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSFLQRRISPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEY
        MSEWPCDKALKNSSPNSALPPTYP SSHPNAAM LNLTNSFLQRRI PAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEY
Subjt:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSFLQRRISPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEY

Query:  SVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        SVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
Subjt:  SVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

A0A6J1J0F9 50S ribosomal protein L31, chloroplastic1.6e-6788.51Show/hide
Query:  SALPPTYPSSHPNAAMALNLTNSFLQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSR
        S LPPTYP     AAMALNLTNSFLQR  SPA+AP K KE GAR +RPVVTCRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSR
Subjt:  SALPPTYPSSHPNAAMALNLTNSFLQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSR

Query:  SALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        SALL+DADQVEKFRKKFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Subjt:  SALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

E5GCI4 50S ribosomal protein L31, chloroplastic1.0e-6685.03Show/hide
Query:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ
        MS+W  DKALK SS      P+YP S   NAAMALNLTNSF  LQR ISPAVAP K KE GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ
Subjt:  MSEWPCDKALKNSSPNSALPPTYP-SSHPNAAMALNLTNSF--LQRRISPAVAPAK-KEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQ

Query:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        KEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Subjt:  KEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

SwissProt top hitse value%identityAlignment
P82249 50S ribosomal protein L31, chloroplastic2.4e-4466.67Show/hide
Query:  MALNLTNSFLQRRISPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKK
        M L L+N FL +  +        +  + + RP  +CRK D+HP+F EDAKVYCNGELVMTTGGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKFRKK
Subjt:  MALNLTNSFLQRRISPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKK

Query:  FGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        +GEL+Q+MEIPVLKGEIILP K+KS  K KKK
Subjt:  FGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

Q31L35 50S ribosomal protein L312.5e-1760.29Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   +ID + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDAD-QVEKFRKKFGEL

Q5N0T7 50S ribosomal protein L312.5e-1760.29Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDAD-QVEKFRKKFGEL
        K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   +ID + +VE+F +K+G L
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDAD-QVEKFRKKFGEL

Q7V9Y9 50S ribosomal protein L315.5e-1758.46Show/hide
Query:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFG
        KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  +L    +V++F +K+G
Subjt:  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFG

Q9FWS4 50S ribosomal protein L31, chloroplastic1.9e-4666.44Show/hide
Query:  MALNLTNSFLQRRISPAVAPAK------------KEFGARSHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA
        MA++L NSFLQ  ISP V   +            K+   RS   VV  TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSA
Subjt:  MALNLTNSFLQRRISPAVAPAK------------KEFGARSHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA

Query:  LLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        L++DADQVEKFRK+F  LS++MEIPVLKGEII+PTK+  G KGKKK
Subjt:  LLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

Arabidopsis top hitse value%identityAlignment
AT1G75350.1 Ribosomal protein L311.4e-4766.44Show/hide
Query:  MALNLTNSFLQRRISPAVAPAK------------KEFGARSHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA
        MA++L NSFLQ  ISP V   +            K+   RS   VV  TCRKK+LHP+F+EDAKVYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSA
Subjt:  MALNLTNSFLQRRISPAVAPAK------------KEFGARSHRPVV--TCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSA

Query:  LLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
        L++DADQVEKFRK+F  LS++MEIPVLKGEII+PTK+  G KGKKK
Subjt:  LLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGAGTGGCCATGCGACAAGGCCTTGAAGAACTCATCTCCCAATTCTGCTCTTCCTCCCACTTATCCTTCATCGCACCCAAACGCAGCAATGGCGCTGAACCTAAC
AAATTCCTTCCTCCAACGGCGAATTTCCCCAGCCGTCGCGCCGGCGAAGAAGGAATTCGGAGCGAGAAGTCACCGGCCGGTGGTCACCTGCCGGAAGAAGGATCTCCACC
CCCAATTCTACGAGGACGCTAAAGTTTATTGCAACGGGGAGCTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGATGTGTGGTCGGGAAATCACCCATTC
TATTTGGGCAGCCGCTCCGCCCTGCTCATCGACGCCGACCAGGTCGAGAAGTTCCGCAAGAAATTCGGAGAGTTGTCGCAGTTGATGGAGATACCGGTGCTCAAAGGCGA
AATCATTCTGCCCACTAAGCGCAAATCCGGCGGCAAAGGGAAGAAGAAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGAGTGGCCATGCGACAAGGCCTTGAAGAACTCATCTCCCAATTCTGCTCTTCCTCCCACTTATCCTTCATCGCACCCAAACGCAGCAATGGCGCTGAACCTAAC
AAATTCCTTCCTCCAACGGCGAATTTCCCCAGCCGTCGCGCCGGCGAAGAAGGAATTCGGAGCGAGAAGTCACCGGCCGGTGGTCACCTGCCGGAAGAAGGATCTCCACC
CCCAATTCTACGAGGACGCTAAAGTTTATTGCAACGGGGAGCTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGATGTGTGGTCGGGAAATCACCCATTC
TATTTGGGCAGCCGCTCCGCCCTGCTCATCGACGCCGACCAGGTCGAGAAGTTCCGCAAGAAATTCGGAGAGTTGTCGCAGTTGATGGAGATACCGGTGCTCAAAGGCGA
AATCATTCTGCCCACTAAGCGCAAATCCGGCGGCAAAGGGAAGAAGAAG
Protein sequenceShow/hide protein sequence
MSEWPCDKALKNSSPNSALPPTYPSSHPNAAMALNLTNSFLQRRISPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPF
YLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK