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MS008877 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008877
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF295 domain-containing protein
Genome locationscaffold629:294723..294899
RNA-Seq ExpressionMS008877
SyntenyMS008877
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603875.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]8.3e-0542.37Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D +DCT +A+F    EDGKLGF +  D KWTL+DE   H+  ++ + +   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

XP_022950355.1 uncharacterized protein LOC111453467 [Cucurbita moschata]8.3e-0542.37Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D +DCT +A+F    EDGKLGF +  D KWTL+DE   H+  ++ + +   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

XP_022978053.1 putative F-box protein At1g65770 [Cucurbita maxima]6.4e-0542.37Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D +DCT +A+F    EDGKLGF +  D KWTL+DE   H+  ++ + +   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

XP_023543888.1 putative F-box protein At1g65770 [Cucurbita pepo subsp. pepo]8.3e-0542.37Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D +DCT +A+F    EDGKLGF +  D KWTL+DE   H+  ++ + +   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

XP_038876198.1 F-box protein At2g26160-like [Benincasa hispida]8.3e-0542.37Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D KDCT +A+F    EDG+LGF +  D KWTL+DE   H+  ++ +     + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

TrEMBL top hitse value%identityAlignment
A0A0A0KLM6 DUF295 domain-containing protein4.0e-0544.07Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D KDCT +A+F    E GKLGF +  D KWTL+DE   H+  ++ + Q   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

A0A1S3CRG5 putative F-box protein At1g657706.9e-0544.07Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D KDCT +A+F    E GKLGF +  D KWTL+DE   H+  ++ + Q   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

A0A5A7VPR3 Putative F-box protein6.9e-0544.07Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D KDCT +A+F    E GKLGF +  D KWTL+DE   H+  ++ + Q   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

A0A6J1GFH5 uncharacterized protein LOC1114534674.0e-0542.37Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D +DCT +A+F    EDGKLGF +  D KWTL+DE   H+  ++ + +   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

A0A6J1IRW4 putative F-box protein At1g657703.1e-0542.37Show/hide
Query:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF
        D +DCT +A+F    EDGKLGF +  D KWTL+DE   H+  ++ + +   + Y VDR+
Subjt:  DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATGCGAAGGACTGCACTGCTCTAGCAATTTTTCTGGTAACTTATGAAGACGGGAAATTAGGGTTCGTTAAACTCAGGGATCACAAATGGACGCTGATGGATGAAATTGA
AACACATTTCTCCTCTATTGTGTGGTTCGGGCAACCAGGCGACGAAATTTACGTCGTCGATCGGTTC
mRNA sequenceShow/hide mRNA sequence
GATGCGAAGGACTGCACTGCTCTAGCAATTTTTCTGGTAACTTATGAAGACGGGAAATTAGGGTTCGTTAAACTCAGGGATCACAAATGGACGCTGATGGATGAAATTGA
AACACATTTCTCCTCTATTGTGTGGTTCGGGCAACCAGGCGACGAAATTTACGTCGTCGATCGGTTC
Protein sequenceShow/hide protein sequence
DAKDCTALAIFLVTYEDGKLGFVKLRDHKWTLMDEIETHFSSIVWFGQPGDEIYVVDRF