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MS008880 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008880
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUracil-DNA glycosylase
Genome locationscaffold629:316114..316209
RNA-Seq ExpressionMS008880
SyntenyMS008880
Gene Ontology termsNA
InterPro domainsIPR036895 - Uracil-DNA glycosylase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8660399.1 hypothetical protein HU200_057981 [Digitaria exilis]3.7e-0787.5Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCRLVPS
        LIDE KHHILK+AHPSGLSANRGFFGCR V S
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCRLVPS
KAF8769240.1 hypothetical protein HU200_006747 [Digitaria exilis]3.7e-0787.5Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCRLVPS
        LIDE KHHILK+AHPSGLSANRGFFGCR V S
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCRLVPS
KAG6650645.1 hypothetical protein CIPAW_06G057700 [Carya illinoinensis]4.8e-0796.55Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCRL
        LIDE KHHILKAAHPSGLSANRGFFGCRL
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCRL
XP_021912260.1 uracil-DNA glycosylase, mitochondrial-like [Carica papaya]2.8e-07100Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCR
        LIDERKHHILKAAHPSGLSANRGFFGCR
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCR
XP_022155192.1 uracil-DNA glycosylase, mitochondrial [Momordica charantia]2.8e-07100Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCR
        LIDERKHHILKAAHPSGLSANRGFFGCR
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCR
TrEMBL top hitse value%identityAlignment
A0A0A0KMG3 Uracil-DNA glycosylase3.1e-0796.43Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCR
        LIDE+KHHILKAAHPSGLSANRGFFGCR
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCR
A0A2N9INL1 Uracil-DNA glycosylase1.1e-0793.33Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCRLV
        LIDE KHHILKAAHPSGLSANRGFFGCR+V
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCRLV
A0A6J1DNP3 Uracil-DNA glycosylase1.4e-07100Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCR
        LIDERKHHILKAAHPSGLSANRGFFGCR
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCR
A0A6J1J2E4 Uracil-DNA glycosylase3.1e-0796.43Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCR
        LIDE+KHHILKAAHPSGLSANRGFFGCR
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCR
A0A7J0GCE8 Uracil-DNA glycosylase3.1e-0793.33Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCRLV
        LIDE KHHILKAAHPSGLSANRGFFGCR V
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCRLV
SwissProt top hitse value%identityAlignment
A7ZQ25 Uracil-DNA glycosylase9.5e-0670.37Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGC
        +ID+++HH+LKA HPS LSA+RGFFGC
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGC
B7MIR5 Uracil-DNA glycosylase9.5e-0670.37Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGC
        +ID+++HH+LKA HPS LSA+RGFFGC
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGC
B7MYL3 Uracil-DNA glycosylase7.2e-0674.07Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGC
        +ID+++HHILKA HPS LSA+RGFFGC
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGC
B7UH19 Uracil-DNA glycosylase9.5e-0670.37Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGC
        +ID+++HH+LKA HPS LSA+RGFFGC
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGC
Q9LIH6 Uracil-DNA glycosylase, mitochondrial2.9e-0785.71Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCR
        LID  KHHIL AAHPSGLSANRGFF CR
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCR
Arabidopsis top hitse value%identityAlignment
AT3G18630.1 uracil dna glycosylase2.1e-0885.71Show/hide
Query:  LIDERKHHILKAAHPSGLSANRGFFGCR
        LID  KHHIL AAHPSGLSANRGFF CR
Subjt:  LIDERKHHILKAAHPSGLSANRGFFGCR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAATTGATGAGAGAAAGCATCACATCCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTCGGCTGCAGGTTAGTTCCATCC
mRNA sequenceShow/hide mRNA sequence
TTAATTGATGAGAGAAAGCATCACATCCTCAAAGCAGCGCATCCTTCTGGTTTGTCTGCTAACAGAGGCTTCTTCGGCTGCAGGTTAGTTCCATCC
Protein sequenceShow/hide protein sequence
LIDERKHHILKAAHPSGLSANRGFFGCRLVPS