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MS008882 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008882
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDUF295 domain-containing protein
Genome locationscaffold629:323017..323277
RNA-Seq ExpressionMS008882
SyntenyMS008882
Gene Ontology termsNA
InterPro domainsIPR005174 - Domain unknown function DUF295


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3973470.1 hypothetical protein CMV_003114 [Castanea mollissima]4.1e-0840.7Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        + ++ D   F+G+N SLCISS++  + +GN IY+T D  D   E    GGHD GV++V + S   L     Y  H +  WP PIWV
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

XP_006663579.1 uncharacterized protein LOC102713418 [Oryza brachyantha]9.1e-0838.37Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        IN L D+ +FLG N S C+SS+  P L+ N +Y+T D+ D  +        D GVF++ N S   +      P    SGWP+PIW+
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

XP_017255078.1 PREDICTED: F-box protein SKIP23-like [Daucus carota subsp. sativus]2.8e-0942.7Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNY---FGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        +NSL D  +FLG N+SL +S+   P+ +GN+IY+T D      E+NY    G HD GV+D+ +GS    L  Y +  H    WP PIWV
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNY---FGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

XP_022155372.1 F-box protein SKIP23-like [Momordica charantia]1.6e-1251.14Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSD-QRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWVV
        I +L+  TIFLGLNTS+CISSK CPKLRGN IYYT D +++          +DFGVFD+++ S   L HD          WP+PIWVV
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSD-QRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWVV

XP_038888322.1 putative F-box protein At2g16290 [Benincasa hispida]1.2e-1246.51Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        +N+L+DY +FLGLNTS+C        L GN IYY+ DQ    + Y++ GGHDFGV+D++N SC  LL D     + +  WP P+WV
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

TrEMBL top hitse value%identityAlignment
A0A164V0D6 DUF295 domain-containing protein1.4e-0942.7Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNY---FGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        +NSL D  +FLG N+SL +S+   P+ +GN+IY+T D      E+NY    G HD GV+D+ +GS    L  Y +  H    WP PIWV
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNY---FGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

A0A453N3N8 DUF295 domain-containing protein3.7e-0739.53Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        INSL D+ + +G N SLC+S++  P+L+ N +Y T D +  T   N     D  VFD++N S   L+     PL   S WP PIW+
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

A0A453N3P4 DUF295 domain-containing protein3.7e-0739.53Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        INSL D+ + +G N SLC+S++  P+L+ N +Y T D +  T   N     D  VFD++N S   L+     PL   S WP PIW+
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

A0A6J1DP54 F-box protein SKIP23-like7.8e-1351.14Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSD-QRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWVV
        I +L+  TIFLGLNTS+CISSK CPKLRGN IYYT D +++          +DFGVFD+++ S   L HD          WP+PIWVV
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSD-QRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWVV

J3N9F7 F-box domain-containing protein4.4e-0838.37Show/hide
Query:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV
        IN L D+ +FLG N S C+SS+  P L+ N +Y+T D+ D  +        D GVF++ N S   +      P    SGWP+PIW+
Subjt:  INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G25920.1 Protein of unknown function (DUF295)2.2e-0429.27Show/hide
Query:  LNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQIS--GWPNP
        + D  IF+G + + C+ +   P L+ N I              YF G++FGV+D++  +C   L   D PL ++    WP P
Subjt:  LNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQIS--GWPNP

AT5G46140.1 Protein of unknown function (DUF295)4.5e-0530.68Show/hide
Query:  SLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSC------NNLLHDYDYPLHQISGWPNPI
        ++ D  IFLG   +LCI +   P L+ N I              YF GH++GVFD++  +C        LL    +P      WP+P+
Subjt:  SLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSC------NNLLHDYDYPLHQISGWPNPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTAATAGCTTGAATGATTATACCATTTTCTTAGGATTGAATACTTCGCTCTGTATCTCATCCAAACATTGTCCCAAGTTGAGAGGTAATCAAATTTACTACACAAGTGA
TCAAAGAGACCACACTATGGAATATAATTATTTTGGTGGTCATGACTTTGGTGTCTTTGACGTATCAAATGGAAGTTGCAATAATTTATTGCACGATTATGACTATCCAC
TCCATCAAATAAGTGGATGGCCTAACCCCATTTGGGTTGTG
mRNA sequenceShow/hide mRNA sequence
ATTAATAGCTTGAATGATTATACCATTTTCTTAGGATTGAATACTTCGCTCTGTATCTCATCCAAACATTGTCCCAAGTTGAGAGGTAATCAAATTTACTACACAAGTGA
TCAAAGAGACCACACTATGGAATATAATTATTTTGGTGGTCATGACTTTGGTGTCTTTGACGTATCAAATGGAAGTTGCAATAATTTATTGCACGATTATGACTATCCAC
TCCATCAAATAAGTGGATGGCCTAACCCCATTTGGGTTGTG
Protein sequenceShow/hide protein sequence
INSLNDYTIFLGLNTSLCISSKHCPKLRGNQIYYTSDQRDHTMEYNYFGGHDFGVFDVSNGSCNNLLHDYDYPLHQISGWPNPIWVV