CuGenDBv2

Gene ID	MS008928
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA-directed RNA polymerase
Genome location	scaffold446:9949..10167
RNA-Seq Expression	MS008928
Synteny	MS008928
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0009507 - chloroplast (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0016787 - hydrolase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

CAB4265714.1 unnamed protein product [Prunus armeniaca]

2.5e-27

82.19

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR  PAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

CAB4269449.1 unnamed protein product [Prunus armeniaca]

2.5e-27

82.19

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR  PAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

KAF3449793.1 hypothetical protein FNV43_RR05871 [Rhamnella rubrinervis]

5.6e-27

80.82

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR  PAG EN SLSWLCYR+ WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

KZM97703.1 hypothetical protein DCAR_014935 [Daucus carota subsp. sativus]

6.6e-28

83.56

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR IPAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

VVA40906.1 PREDICTED: cell wall-associated hydrolase [Prunus dulcis]

2.5e-27

82.19

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR  PAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

TrEMBL top hits

e value

%identity

Alignment

A0A165WVC1 Uncharacterized protein

3.2e-28

83.56

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR IPAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

A0A5E4GMM3 PREDICTED: cell wall-associated hydrolase

1.2e-27

82.19

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR  PAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

A0A6J5TQC5 Uncharacterized protein

1.2e-27

82.19

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR  PAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

A0A6J5XQ66 Uncharacterized protein

1.2e-27

82.19

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFCR  PAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

W9RPF7 Uncharacterized protein

4.6e-27

80.82

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Query:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG
        MING SRRD+LLNSQNFC   PAG EN SLSWLCYRR WGSRNRRALIL WAYYLDAFS+YPL TWL  VY G
Subjt:  MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGATAAACGGTCCATCTCGTCGTGACATTCTCTTGAATTCTCAAAATTTCTGCCGCTTCATCCCCGCAGGGACAGAGAACTCATCGCTGTCTTGGCTGTGCTACCGAAG
GTGTTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGAGATGGGCTTACTACTTAGATGCTTTCAGCAATTATCCGCTCCACACTTGGCTATCCAGAGTTTACCATGGG

mRNA sequence

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Protein sequence

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MINGPSRRDILLNSQNFCRFIPAGTENSSLSWLCYRRCWGSRNRRALILRWAYYLDAFSNYPLHTWLSRVYHG

MS008928 (gene) of Bitter gourd (TR) v1 genome