; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008931 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008931
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationscaffold446:55514..58590
RNA-Seq ExpressionMS008931
SyntenyMS008931
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]6.3e-5552.22Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLS---PPQEYS------
        MMSS  E RN P CDN Q      NY+T+NSQ    HG  HG    +TT  M KE++ NWAWPK LV S P  KTS K++  TLS   P   Y       
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLS---PPQEYS------

Query:  --------------------------------------------------KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKK
                                                             + RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVEN+I+RSQ+K
Subjt:  --------------------------------------------------KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SK KK E+ + +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]1.9e-5953.26Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------
        MMSS  E  NRP CDN Q  N      T+NSQ    HGG       +TT  MSKE++ NWAWPKGLV S P P+TS K+M+ TLS  +            
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------

Query:  ----------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRIN
                                                            +YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVENRI+
Subjt:  ----------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRIN

Query:  RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDEN--GSNISLGSEPMSNGSSCYEGSGLHLSAYI
        RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKKVE+  S+DDD++  GSNISLGSE M NGS+CY+GS LHLSAYI
Subjt:  RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDEN--GSNISLGSEPMSNGSSCYEGSGLHLSAYI

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]5.1e-10575.36Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------
        MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTT+SPPQ            
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------

Query:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
                                                              EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
Subjt:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVES ASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
Subjt:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI

XP_022151661.1 nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]5.1e-10575.36Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------
        MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTT+SPPQ            
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------

Query:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
                                                              EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
Subjt:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVES ASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
Subjt:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]6.3e-5552.22Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLS---PPQEYS------
        MMSS  E RN P CDN Q      NY+T+NSQ    HG  HG    +TT  M KE++ NWAWPK LV S P  KTS K++  TLS   P   Y       
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLS---PPQEYS------

Query:  --------------------------------------------------KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKK
                                                             + RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVEN+I+RSQ+K
Subjt:  --------------------------------------------------KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SK KK E+ + +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit3.1e-5552.22Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLS---PPQEYS------
        MMSS  E RN P CDN Q      NY+T+NSQ    HG  HG    +TT  M KE++ NWAWPK LV S P  KTS K++  TLS   P   Y       
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLS---PPQEYS------

Query:  --------------------------------------------------KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKK
                                                             + RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVEN+I+RSQ+K
Subjt:  --------------------------------------------------KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKK

Query:  PYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        PYLHESRHLHAMRRERGCGGRF+SK KK E+ + +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Subjt:  PYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-NGSNISLGSEPMSNGSSCYEGSGLHLSAYI

A0A1S3CEE5 Nuclear transcription factor Y subunit9.2e-6053.26Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------
        MMSS  E  NRP CDN Q  N      T+NSQ    HGG       +TT  MSKE++ NWAWPKGLV S P P+TS K+M+ TLS  +            
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------

Query:  ----------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRIN
                                                            +YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVENRI+
Subjt:  ----------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRIN

Query:  RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDEN--GSNISLGSEPMSNGSSCYEGSGLHLSAYI
        RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKKVE+  S+DDD++  GSNISLGSE M NGS+CY+GS LHLSAYI
Subjt:  RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDEN--GSNISLGSEPMSNGSSCYEGSGLHLSAYI

A0A6J1DBT5 Nuclear transcription factor Y subunit2.5e-10575.36Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------
        MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTT+SPPQ            
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------

Query:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
                                                              EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
Subjt:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVES ASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
Subjt:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI

A0A6J1DFC4 Nuclear transcription factor Y subunit2.5e-10575.36Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------
        MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTT+SPPQ            
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQ------------

Query:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
                                                              EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR
Subjt:  ------------------------------------------------------EYSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENR

Query:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVES ASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
Subjt:  INRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI

A0A6J1EKQ7 Nuclear transcription factor Y subunit2.3e-4748.48Show/hide
Query:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPP-------------
        MMSS T+YR  P             Y   N Q  WW G         TT  +SKED+ NW WP GLV +GP P  S K++Q T++PP             
Subjt:  MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPP-------------

Query:  ------------------------QEYSKVAHG-----------------RMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHE
                                 +Y+ V +G                 RM LPLA+AEEPVYVNAKQYHGILRRRQSRAKAEV N+I+RSQKKPYLHE
Subjt:  ------------------------QEYSKVAHG-----------------RMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHE

Query:  SRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI
        SRHLHAMRRERGC GRFVSKKK VE +ASM DD  GSN+S         S+CY+GS LHLSAYI
Subjt:  SRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-74.3e-2253.39Show/hide
Query:  PPQEYSKVAHGRMA-------LPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDD
        PPQ Y+ V    M        LP    EEPV+VNAKQYHGILRRRQSRA+ E +N++ +S +KPYLHESRHLHA+RR RGCGGRF++ KK+ E       
Subjt:  PPQEYSKVAHGRMA-------LPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDD

Query:  DENGSNISLGSEPMSNGS
        +E  SN+S G   M+  S
Subjt:  DENGSNISLGSEPMSNGS

Q8VY64 Nuclear transcription factor Y subunit A-48.1e-2158.76Show/hide
Query:  EEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKK-----KVESLASMDDDENGSNISLGSEPMSNGSS
        EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ KKPY+HESRHLHA+RR RGCGGRF++ KK     K E  A+ D++ + ++ SL SE ++  +S
Subjt:  EEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKK-----KVESLASMDDDENGSNISLGSEPMSNGSS

Q945M9 Nuclear transcription factor Y subunit A-91.4e-2055.14Show/hide
Query:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS
        Y  + H RM LP  +A+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S +KPYLHESRH HAMRR RG GGRF    KK  + AS    E  SN  +  
Subjt:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS

Query:  EPMSNGS
         P S+ S
Subjt:  EPMSNGS

Q9LXV5 Nuclear transcription factor Y subunit A-14.0e-2054.95Show/hide
Query:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS
        Y  +   R ALPL +A+EPVYVNAKQY GILRRR++RAKAE+E ++ R  +KPYLHESRH HAMRR R  GGRF +KK +VE+     +D  G +   GS
Subjt:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS

Query:  EPMSNGSSCYE
           S+GS   E
Subjt:  EPMSNGSSCYE

Q9SYH4 Nuclear transcription factor Y subunit A-52.2e-1849.57Show/hide
Query:  TLSPPQEYSKVAHGRMALPLAIAE-EPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-
        T  P  E   +   R+ LP  I E EP++VNAKQYH ILRRR+ RAK E +N++ +  +KPYLHESRHLHA++R RG GGRF++ KK  ES  S+   + 
Subjt:  TLSPPQEYSKVAHGRMALPLAIAE-EPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDE-

Query:  -NGSNISLGSEPMSNGS
         NG N S+   P   GS
Subjt:  -NGSNISLGSEPMSNGS

Arabidopsis top hitse value%identityAlignment
AT1G30500.1 nuclear factor Y, subunit A71.4e-2354.39Show/hide
Query:  PPQEYS---KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENG
        PPQ Y+    V    + LP    EEPV+VNAKQYHGILRRRQSRA+ E +N++ +S +KPYLHESRHLHA+RR RGCGGRF++ KK+ E       +E  
Subjt:  PPQEYS---KVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENG

Query:  SNISLGSEPMSNGS
        SN+S G   M+  S
Subjt:  SNISLGSEPMSNGS

AT1G30500.2 nuclear factor Y, subunit A73.0e-2353.39Show/hide
Query:  PPQEYSKVAHGRMA-------LPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDD
        PPQ Y+ V    M        LP    EEPV+VNAKQYHGILRRRQSRA+ E +N++ +S +KPYLHESRHLHA+RR RGCGGRF++ KK+ E       
Subjt:  PPQEYSKVAHGRMA-------LPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDD

Query:  DENGSNISLGSEPMSNGS
        +E  SN+S G   M+  S
Subjt:  DENGSNISLGSEPMSNGS

AT2G34720.1 nuclear factor Y, subunit A45.7e-2258.76Show/hide
Query:  EEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKK-----KVESLASMDDDENGSNISLGSEPMSNGSS
        EEPV+VNAKQYHGILRRRQSRAK E  NR  ++ KKPY+HESRHLHA+RR RGCGGRF++ KK     K E  A+ D++ + ++ SL SE ++  +S
Subjt:  EEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKK-----KVESLASMDDDENGSNISLGSEPMSNGSS

AT3G20910.1 nuclear factor Y, subunit A99.8e-2255.14Show/hide
Query:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS
        Y  + H RM LP  +A+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S +KPYLHESRH HAMRR RG GGRF    KK  + AS    E  SN  +  
Subjt:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS

Query:  EPMSNGS
         P S+ S
Subjt:  EPMSNGS

AT5G12840.1 nuclear factor Y, subunit A12.8e-2154.95Show/hide
Query:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS
        Y  +   R ALPL +A+EPVYVNAKQY GILRRR++RAKAE+E ++ R  +KPYLHESRH HAMRR R  GGRF +KK +VE+     +D  G +   GS
Subjt:  YSKVAHGRMALPLAIAEEPVYVNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGS

Query:  EPMSNGSSCYE
           S+GS   E
Subjt:  EPMSNGSSCYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCTCTGGAACAGAATATAGAAACCGTCCAATTTGTGATAATCTGCAAACCAGAAACCGTAGCCCAAACTACACCACTGATAATTCTCAATCCTGGTGGTGGCA
CGGCGGCGGACACGGCGGCGCTACTACTACCACCACCACCACCATGTCAAAGGAAGACGAATCAAATTGGGCTTGGCCCAAAGGCTTGGTTAGCAGTGGGCCAGGGCCCA
AAACAAGCATCAAGCAAATGCAAACAACTCTATCCCCACCTCAAGAATATAGCAAAGTGGCACATGGTAGAATGGCTCTGCCTCTTGCGATCGCAGAAGAACCTGTTTAC
GTGAACGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAAGCCGAAGTTGAAAACAGGATAAACAGATCACAAAAGAAGCCCTATCTTCACGAGTC
GAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGCGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGTGGAAAGTTTAGCTTCCATGGATGATGATGAAAATGGCAGCA
ACATCAGCTTAGGCTCTGAGCCAATGTCTAATGGCAGCAGCTGCTATGAAGGATCAGGGTTACACTTATCTGCATATATA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGCTCTGGAACAGAATATAGAAACCGTCCAATTTGTGATAATCTGCAAACCAGAAACCGTAGCCCAAACTACACCACTGATAATTCTCAATCCTGGTGGTGGCA
CGGCGGCGGACACGGCGGCGCTACTACTACCACCACCACCACCATGTCAAAGGAAGACGAATCAAATTGGGCTTGGCCCAAAGGCTTGGTTAGCAGTGGGCCAGGGCCCA
AAACAAGCATCAAGCAAATGCAAACAACTCTATCCCCACCTCAAGAATATAGCAAAGTGGCACATGGTAGAATGGCTCTGCCTCTTGCGATCGCAGAAGAACCTGTTTAC
GTGAACGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAAGCCGAAGTTGAAAACAGGATAAACAGATCACAAAAGAAGCCCTATCTTCACGAGTC
GAGACACCTGCACGCCATGAGAAGGGAAAGGGGCTGCGGAGGCCGTTTCGTGAGCAAGAAGAAGAAGGTGGAAAGTTTAGCTTCCATGGATGATGATGAAAATGGCAGCA
ACATCAGCTTAGGCTCTGAGCCAATGTCTAATGGCAGCAGCTGCTATGAAGGATCAGGGTTACACTTATCTGCATATATA
Protein sequenceShow/hide protein sequence
MMSSGTEYRNRPICDNLQTRNRSPNYTTDNSQSWWWHGGGHGGATTTTTTTMSKEDESNWAWPKGLVSSGPGPKTSIKQMQTTLSPPQEYSKVAHGRMALPLAIAEEPVY
VNAKQYHGILRRRQSRAKAEVENRINRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKVESLASMDDDENGSNISLGSEPMSNGSSCYEGSGLHLSAYI