; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008938 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008938
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein s2
Genome locationscaffold446:305132..306732
RNA-Seq ExpressionMS008938
SyntenyMS008938
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000851 - Ribosomal protein S5
IPR005324 - Ribosomal protein S5, C-terminal
IPR005711 - Ribosomal protein S5, eukaryotic/archaeal
IPR013810 - Ribosomal protein S5, N-terminal
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR018192 - Ribosomal protein S5, N-terminal, conserved site
IPR020568 - Ribosomal protein S5 domain 2-type fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149390.2 40S ribosomal protein S2-4 [Cucumis sativus]3.2e-14498.52Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRR+EEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLL+DAER AA
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

XP_008460763.1 PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo]1.7e-14599.26Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLL+DAERVAA
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

XP_022928633.1 40S ribosomal protein S2-4-like [Cucurbita moschata]1.4e-14498.52Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETRFTKSPFQEHTDLLAKPTVKALLLDDAERV A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

XP_038882736.1 40S ribosomal protein S2-4-like [Benincasa hispida]5.5e-14498.51Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERV
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLL+D ERV
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERV

XP_038883184.1 40S ribosomal protein S2-4 [Benincasa hispida]2.7e-14398.14Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERV
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLL+D E V
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERV

TrEMBL top hitse value%identityAlignment
A0A0A0KZQ4 S5 DRBM domain-containing protein1.6e-14498.52Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRR+EEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLL+DAER AA
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

A0A1S3CCQ1 40S ribosomal protein S2-4-like8.3e-14699.26Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLL+DAERVAA
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

A0A5A7ULX0 40S ribosomal protein S2-4-like8.3e-14699.26Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLL+DAERVAA
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

A0A6J1EPL6 40S ribosomal protein S2-4-like7.0e-14598.52Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETRFTKSPFQEHTDLLAKPTVKALLLDDAERV A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

A0A6J1HTA3 40S ribosomal protein S2-4-like7.0e-14598.52Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        MAERGG+RGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA
        DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ETRFTKSPFQEHTDLLAKPTVKALLLDDAERV A
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA

SwissProt top hitse value%identityAlignment
P15880 40S ribosomal protein S22.4e-10273.54Show/hide
Query:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGR--RDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRA
        M  RGG RGGFG G  GRGRG  RGRGR R  R  + E+++W+PVTKLGRLVK+ KI+SLE+IYL SLPIKE +I+D  +G SLKDEV+KIMPVQKQTRA
Subjt:  MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGR--RDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRA

Query:  GQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAG
        GQRTRFKAFV +GD NGHVGLGVKCSKEVATAIRG+IILAKLS++PVRRGYWGNKIGKPHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L  AG
Subjt:  GQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAG

Query:  IEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAK
        I+D +TS+RG T TLGNF KATFD + KTY +LTP+ W+ET FTKSP+QE TD L K
Subjt:  IEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAK

P49688 40S ribosomal protein S2-31.2e-12286.82Show/hide
Query:  ERGGERGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQT
        ERGGERG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKLGRLV  G I+ +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQT
Subjt:  ERGGERGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQT

Query:  RAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQF
        RAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQF
Subjt:  RAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQF

Query:  AGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLA
        AGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD LA
Subjt:  AGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLA

Q8L8Y0 40S ribosomal protein S2-11.4e-12184.53Show/hide
Query:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ
        AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQ
Subjt:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ

Query:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ
        TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQ
Subjt:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ

Query:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        FAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

Q93VB8 40S ribosomal protein S2-21.4e-12184.53Show/hide
Query:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ
        AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQ
Subjt:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ

Query:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ
        TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQ
Subjt:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ

Query:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        FAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

Q9SCM3 40S ribosomal protein S2-41.7e-12488.08Show/hide
Query:  ERGGERGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        ERGG+RG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGERGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAF+VVGD NGHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+KSP+QEHTD LL  P VK
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK

Arabidopsis top hitse value%identityAlignment
AT1G58380.1 Ribosomal protein S5 family protein9.7e-12384.53Show/hide
Query:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ
        AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQ
Subjt:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ

Query:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ
        TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQ
Subjt:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ

Query:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        FAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT1G58983.1 Ribosomal protein S5 family protein9.7e-12384.53Show/hide
Query:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ
        AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQ
Subjt:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ

Query:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ
        TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQ
Subjt:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ

Query:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        FAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT1G59359.1 Ribosomal protein S5 family protein9.7e-12384.53Show/hide
Query:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ
        AERGG+RG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKLGRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQ
Subjt:  AERGGERGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQ

Query:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ
        TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQ
Subjt:  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQ

Query:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA
        FAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD L+   V A
Subjt:  FAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKA

AT2G41840.1 Ribosomal protein S5 family protein8.8e-12486.82Show/hide
Query:  ERGGERGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQT
        ERGGERG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKLGRLV  G I+ +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQT
Subjt:  ERGGERGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQT

Query:  RAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQF
        RAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQF
Subjt:  RAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQF

Query:  AGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLA
        AGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF++SP+QEHTD LA
Subjt:  AGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLA

AT3G57490.1 Ribosomal protein S5 family protein1.2e-12588.08Show/hide
Query:  ERGGERGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ
        ERGG+RG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGKI  +EQIYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQ
Subjt:  ERGGERGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQ

Query:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE
        RTRFKAF+VVGD NGHVGLGVKCSKEVATAIRG+IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+
Subjt:  RTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIE

Query:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK
        DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPEFW+ETRF+KSP+QEHTD LL  P VK
Subjt:  DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTD-LLAKPTVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAGAGGAGGAGAACGCGGCGGCTTCGGCAGGGGATTTGGCGGCAGAGGCCGTGGTGGTGACCGTGGCCGCGGCCGCCGTCGTGCAGGCCGCCGCGACGAAGA
GGAGAAGTGGGTTCCAGTCACTAAGCTCGGCCGTCTCGTGAAGGAAGGTAAGATTCAGTCATTGGAGCAGATTTACCTCCACTCACTCCCAATCAAGGAGCACCAGATCG
TCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGTGCCGGTCAGAGAACTAGGTTTAAGGCCTTCGTGGTCGTC
GGCGACGGCAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGCGGTTCGATCATATTGGCTAAGTTGTCGGTCATCCCTGTGAGGAG
GGGTTACTGGGGGAACAAGATCGGAAAGCCTCATACTGTACCGTGCAAGGTCACCGGAAAGTGTGGCTCTGTCACCGTCCGTATGGTCCCTGCTCCTCGTGGAGCTGGGA
TTGTCGCCGCTAGGGTTCCCAAGAAGGTGCTGCAATTCGCTGGTATTGAGGATGTTTTTACCTCTTCGAGGGGTTCGACTAAGACTCTTGGTAACTTTGTGAAGGCAACC
TTTGATTGTCTATTGAAAACCTACGGTTTCCTCACACCCGAATTCTGGAGAGAGACTCGCTTCACCAAGTCTCCATTCCAAGAGCACACTGATCTGTTGGCCAAACCGAC
TGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTGCTGCT
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAGAGGAGGAGAACGCGGCGGCTTCGGCAGGGGATTTGGCGGCAGAGGCCGTGGTGGTGACCGTGGCCGCGGCCGCCGTCGTGCAGGCCGCCGCGACGAAGA
GGAGAAGTGGGTTCCAGTCACTAAGCTCGGCCGTCTCGTGAAGGAAGGTAAGATTCAGTCATTGGAGCAGATTTACCTCCACTCACTCCCAATCAAGGAGCACCAGATCG
TCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTGCAGAAGCAGACCCGTGCCGGTCAGAGAACTAGGTTTAAGGCCTTCGTGGTCGTC
GGCGACGGCAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGCGGTTCGATCATATTGGCTAAGTTGTCGGTCATCCCTGTGAGGAG
GGGTTACTGGGGGAACAAGATCGGAAAGCCTCATACTGTACCGTGCAAGGTCACCGGAAAGTGTGGCTCTGTCACCGTCCGTATGGTCCCTGCTCCTCGTGGAGCTGGGA
TTGTCGCCGCTAGGGTTCCCAAGAAGGTGCTGCAATTCGCTGGTATTGAGGATGTTTTTACCTCTTCGAGGGGTTCGACTAAGACTCTTGGTAACTTTGTGAAGGCAACC
TTTGATTGTCTATTGAAAACCTACGGTTTCCTCACACCCGAATTCTGGAGAGAGACTCGCTTCACCAAGTCTCCATTCCAAGAGCACACTGATCTGTTGGCCAAACCGAC
TGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTTGCTGCT
Protein sequenceShow/hide protein sequence
MAERGGERGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVV
GDGNGHVGLGVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKAT
FDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVAA