; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008948 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008948
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBEST Arabidopsis thaliana protein match is: reduced male fertility .
Genome locationscaffold399:44146..47233
RNA-Seq ExpressionMS008948
SyntenyMS008948
Gene Ontology termsGO:0034968 - histone lysine methylation (biological process)
GO:0061458 - reproductive system development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0018024 - histone-lysine N-methyltransferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK24589.1 putative F-box protein [Cucumis melo var. makuwa]2.0e-17085.79Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKF
        M KKLSIASARDRVVTRSQS +MER ++SKRS     P+ AAEPEG M KR+RRD+K   IH CSSP SAFLT        ASSSSCWYDADVWTEVAKF
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKF

Query:  LDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQD
        LDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DSSVALLSERLGSQ+K+PKQ 
Subjt:  LDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQD

Query:  SKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILD
        S  N LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSGILD
Subjt:  SKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILD

Query:  MQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        +++W+G R DWQPKAMITL AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Subjt:  MQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

XP_004140675.1 probable F-box protein At3g61730 [Cucumis sativus]3.2e-17386.87Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFL
        MGKKLSIASARDRVVTRSQS +MER +++KRS    P+ AAEPEG M KR+RRD+K   IH CSSPRSAFLT        ASSSSCWYDADVWTEVAKFL
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFL

Query:  DGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDS
        DGRSLMMLAATSRWFYR VMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DSSVALLSERLGSQ+KIPKQDS
Subjt:  DGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDS

Query:  KDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDM
         DN LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSG+LD+
Subjt:  KDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDM

Query:  QTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        ++W+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Subjt:  QTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

XP_022152035.1 probable F-box protein At3g61730 [Momordica charantia]4.9e-19899.71Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATS
        MGKKLSI+SARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATS
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATS

Query:  RWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVL
        RWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVL
Subjt:  RWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVL

Query:  HNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP
        HNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP
Subjt:  HNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP

Query:  KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
Subjt:  KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

XP_023548391.1 probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]9.4e-17387.04Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKR-SPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGR
        MGKKLSIASARDRVVTRSQS AMERE++S   +P+ A EPEG M KR+RRD+K   IH CSSPRS FLT        ASSS+CWYDADVWTEVAKFLDGR
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKR-SPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGR

Query:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDN
        SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV LLSERLGSQVKIPKQDS DN
Subjt:  SLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDN

Query:  MLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTW
         LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQI+GSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD+++W
Subjt:  MLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTW

Query:  SGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        +G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Subjt:  SGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

XP_038875515.1 probable F-box protein At3g61730 [Benincasa hispida]6.1e-17286.83Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS---PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLD
        MGKKLSIASARDRVVTRS S AMER ++SKRS    + AAEPEG + KR+RRD+K   IH CSSPRSAFLT        ASSSSCWYDADVWTEVAKFLD
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS---PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLD

Query:  GRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSK
        GRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF +DSSVALLSERLGSQ+KIPKQDS 
Subjt:  GRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSK

Query:  DNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQ
        D  LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD++
Subjt:  DNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQ

Query:  TWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        +W+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Subjt:  TWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

TrEMBL top hitse value%identityAlignment
A0A0A0KD88 Uncharacterized protein1.6e-17386.87Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFL
        MGKKLSIASARDRVVTRSQS +MER +++KRS    P+ AAEPEG M KR+RRD+K   IH CSSPRSAFLT        ASSSSCWYDADVWTEVAKFL
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFL

Query:  DGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDS
        DGRSLMMLAATSRWFYR VMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DSSVALLSERLGSQ+KIPKQDS
Subjt:  DGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDS

Query:  KDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDM
         DN LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSG+LD+
Subjt:  KDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDM

Query:  QTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        ++W+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Subjt:  QTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

A0A1S3CBL0 probable F-box protein At3g617301.4e-16185.76Show/hide
Query:  MERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME
        MER ++SKRS     P+ AAEPEG M KR+RRD+K   IH CSSP SAFLT        ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME
Subjt:  MERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVME

Query:  DSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWI
        DSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DSSVALLSERLGSQ+K+PKQ S  N LESGCCVLHNVKTGIWI
Subjt:  DSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWI

Query:  ADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAV
        ADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSGILD+++W+G R DWQPKAMITL AV
Subjt:  ADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAV

Query:  AVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        AVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Subjt:  AVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

A0A5D3DMQ8 Putative F-box protein9.5e-17185.79Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKF
        M KKLSIASARDRVVTRSQS +MER ++SKRS     P+ AAEPEG M KR+RRD+K   IH CSSP SAFLT        ASSSSCWYDADVWTEVAKF
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKRS-----PIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLT--------ASSSSCWYDADVWTEVAKF

Query:  LDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQD
        LDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAF +DSSVALLSERLGSQ+K+PKQ 
Subjt:  LDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQD

Query:  SKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILD
        S  N LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQIVGSHDIRKPTE+ASGAIFDVKHLEDSSTSGILD
Subjt:  SKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILD

Query:  MQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        +++W+G R DWQPKAMITL AVAVNTYLQDNEGVHVKYQAMR GANGEVVSIRISQQLL
Subjt:  MQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

A0A6J1DCT6 probable F-box protein At3g617302.4e-19899.71Show/hide
Query:  MGKKLSIASARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATS
        MGKKLSI+SARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATS
Subjt:  MGKKLSIASARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATS

Query:  RWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVL
        RWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVL
Subjt:  RWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVL

Query:  HNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP
        HNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP
Subjt:  HNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQP

Query:  KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
Subjt:  KAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

A0A6J1EVC3 probable F-box protein At3g617304.3e-14793.36Show/hide
Query:  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSE
        YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV LLSE
Subjt:  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSE

Query:  RLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVK
        RLGSQVKIPKQDS DN LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSW+YQI+GSHDIRKPTE+ASGAIFDVK
Subjt:  RLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVK

Query:  HLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        HL+DSSTSGILD+++W+G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Subjt:  HLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

SwissProt top hitse value%identityAlignment
Q9FGB8 Probable F-box protein At5g360003.5e-10658.22Show/hide
Query:  IHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKH
        IH C SPR +  T  S   WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQV      +  WIK+Y SAFDGSHSY+F Q+EKH
Subjt:  IHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKH

Query:  LDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQI
        +DWMR+GAF +DS  + L+E L  ++K+P + + + ML+ SG C+++++K+GIWIADLQL+RCP+CDL+TCDGTMQTLD RHIELFL+EGY+DGSWDY +
Subjt:  LDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQI

Query:  VGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        +GSH + K   AA GAIFD+KHL+ SS+SGIL++++W+G+  D QPKA+I  HAVAV+T LQ NEG+ VKY  M+ G +G++VSIRISQQLL
Subjt:  VGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

Q9M365 Probable F-box protein At3g617302.9e-10854.41Show/hide
Query:  RDRVVTRSQSSAMERE---RLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV
        R  V +  Q + ++RE   R  +R   ++ +  G + + IR          C SPR +  T  S   WY+ D+WT +++FLDG+SL+ L AT++WFY++ 
Subjt:  RDRVVTRSQSSAMERE---RLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV

Query:  MEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTG
        MED++W++ CLRDLQV  P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF +DS  +LL+E L  ++K P++ + + ML+ SG C+++++K+G
Subjt:  MEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTG

Query:  IWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITL
        IWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EGY+DGSWDY ++GSH ++K   AA GAIFD+KHL++SS SGIL++++W+G+  D QPKA+I  
Subjt:  IWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITL

Query:  HAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        HAVAV+T LQ+NEG+ VKY  M+ G +G++VSIRISQQLL
Subjt:  HAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

Arabidopsis top hitse value%identityAlignment
AT3G61730.1 reduced male fertility3.4e-10453.24Show/hide
Query:  RDRVVTRSQSSAMERE---RLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV
        R  V +  Q + ++RE   R  +R   ++ +  G + + IR          C SPR +  T  S   WY+ D+WT +++FLDG+SL+ L AT++WFY++ 
Subjt:  RDRVVTRSQSSAMERE---RLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLV

Query:  MEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTG
        MED++W++ CLRDLQV  P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF +DS  +LL+E L  ++K P++ + + ML+ SG C+++++K+G
Subjt:  MEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTG

Query:  IWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITL
        IWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+EGY+DGSWDY ++GSH ++K   AA GAIFD+KHL++SS SGIL++++W+G+  D QPKA+I  
Subjt:  IWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITL

Query:  HAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        HAVAV+T LQ+NEG+ VKY  M+ G +G++VSIRISQQLL
Subjt:  HAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL

AT3G62500.1 BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1)1.8e-4151.19Show/hide
Query:  DWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVG
        DWM IGAF +DS  +LL+E L  ++K+PK+ + + ML+                 LQLVR PVCDL     TMQTLDARHIELFL+EGY+DGSWDY ++G
Subjt:  DWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVG

Query:  SHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVK
        SH ++K   AA GAIFD+KH ++SS+SGIL++++W+G+    QPKA+I  HAVAV+T L++NE   ++
Subjt:  SHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVK

AT5G36000.1 BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1)2.5e-10758.22Show/hide
Query:  IHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKH
        IH C SPR +  T  S   WY+ D+WT + +FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQV      +  WIK+Y SAFDGSHSY+F Q+EKH
Subjt:  IHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKH

Query:  LDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQI
        +DWMR+GAF +DS  + L+E L  ++K+P + + + ML+ SG C+++++K+GIWIADLQL+RCP+CDL+TCDGTMQTLD RHIELFL+EGY+DGSWDY +
Subjt:  LDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQI

Query:  VGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL
        +GSH + K   AA GAIFD+KHL+ SS+SGIL++++W+G+  D QPKA+I  HAVAV+T LQ NEG+ VKY  M+ G +G++VSIRISQQLL
Subjt:  VGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGAAATTGAGCATTGCCTCAGCGCGCGATCGAGTGGTTACGAGATCTCAATCCAGTGCCATGGAGCGGGAGAGATTGTCTAAGCGATCGCCGATTGCTGCTGC
GGAGCCGGAGGGAGTAATGGCCAAGCGAATCCGAAGAGATGTTAAGCATCCGATCATTCATCCTTGCAGCTCTCCTCGTTCCGCCTTTCTCACTGCATCTTCCTCTTCCT
GCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTTGACGGAAGATCTCTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTTATGGAAGAC
AGCATATGGAAGTATGTCTGCCTGCGTGATCTTCAGGTCTCTGCTCCTCAAATCACGGCCTTCAAATGGATTAAACTCTATGTTTCCGCCTTCGACGGAAGCCACTCTTA
CATTTTCCGGCAGCAGGAGAAGCATCTTGATTGGATGCGAATTGGGGCATTTTCCATGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAGTGAAAATCC
CAAAACAGGATTCAAAGGATAACATGTTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGATCTACAACTTGTTCGTTGTCCCGTCTGC
GACCTGAATACATGTGATGGAACAATGCAGACGTTGGATGCGAGGCACATAGAGTTGTTCCTAAATGAAGGTTACCAAGATGGGAGTTGGGATTATCAGATTGTAGGTTC
CCATGATATCAGGAAGCCTACAGAAGCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACCTCTGGAATACTGGATATGCAAACATGGAGTGGAA
AGCGTACAGATTGGCAACCAAAGGCTATGATCACTCTCCATGCCGTTGCTGTAAACACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGGA
GGAGCAAATGGAGAAGTGGTTTCTATCAGAATCTCTCAGCAGCTTCTG
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGAAATTGAGCATTGCCTCAGCGCGCGATCGAGTGGTTACGAGATCTCAATCCAGTGCCATGGAGCGGGAGAGATTGTCTAAGCGATCGCCGATTGCTGCTGC
GGAGCCGGAGGGAGTAATGGCCAAGCGAATCCGAAGAGATGTTAAGCATCCGATCATTCATCCTTGCAGCTCTCCTCGTTCCGCCTTTCTCACTGCATCTTCCTCTTCCT
GCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTTGACGGAAGATCTCTGATGATGCTTGCGGCGACTAGTCGGTGGTTTTACCGTTTAGTTATGGAAGAC
AGCATATGGAAGTATGTCTGCCTGCGTGATCTTCAGGTCTCTGCTCCTCAAATCACGGCCTTCAAATGGATTAAACTCTATGTTTCCGCCTTCGACGGAAGCCACTCTTA
CATTTTCCGGCAGCAGGAGAAGCATCTTGATTGGATGCGAATTGGGGCATTTTCCATGGATTCTTCAGTAGCACTCCTGTCAGAAAGGCTAGGCTCCCAAGTGAAAATCC
CAAAACAGGATTCAAAGGATAACATGTTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCTGATCTACAACTTGTTCGTTGTCCCGTCTGC
GACCTGAATACATGTGATGGAACAATGCAGACGTTGGATGCGAGGCACATAGAGTTGTTCCTAAATGAAGGTTACCAAGATGGGAGTTGGGATTATCAGATTGTAGGTTC
CCATGATATCAGGAAGCCTACAGAAGCAGCTTCAGGGGCCATTTTTGATGTCAAGCACCTGGAAGACTCTTCAACCTCTGGAATACTGGATATGCAAACATGGAGTGGAA
AGCGTACAGATTGGCAACCAAAGGCTATGATCACTCTCCATGCCGTTGCTGTAAACACCTATTTACAAGACAATGAAGGAGTTCATGTGAAATACCAGGCCATGAGAGGA
GGAGCAAATGGAGAAGTGGTTTCTATCAGAATCTCTCAGCAGCTTCTG
Protein sequenceShow/hide protein sequence
MGKKLSIASARDRVVTRSQSSAMERERLSKRSPIAAAEPEGVMAKRIRRDVKHPIIHPCSSPRSAFLTASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
SIWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVALLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVC
DLNTCDGTMQTLDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTWSGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRG
GANGEVVSIRISQQLL