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MS008955 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008955
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionABC transporter F family member 4-like
Genome locationscaffold399:132146..132318
RNA-Seq ExpressionMS008955
SyntenyMS008955
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027450.1 ABC transporter F family member 4, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2094.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVE FPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
XP_022157860.1 ABC transporter F family member 4-like [Momordica charantia]1.7e-2094.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISR CEDEEKSEIW+VENGTVESFPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
XP_022158213.1 ABC transporter F family member 4-like [Momordica charantia]4.5e-2196.36Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVESFPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
XP_022925094.1 ABC transporter F family member 4-like [Cucurbita moschata]2.3e-2094.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVE FPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
XP_022966192.1 ABC transporter F family member 4-like [Cucurbita maxima]2.3e-2094.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVE FPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
TrEMBL top hitse value%identityAlignment
A0A1S3CJD6 ABC transporter F family member 4-like1.1e-2094.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVE FPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
A0A5A7VGP5 ABC transporter F family member 4-like1.1e-2094.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVE FPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
A0A6J1DU74 ABC transporter F family member 4-like8.3e-2194.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISR CEDEEKSEIW+VENGTVESFPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
A0A6J1DVG6 ABC transporter F family member 4-like2.2e-2196.36Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVESFPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
A0A6J1HMB1 ABC transporter F family member 4-like1.1e-2094.55Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVCEDEEKSEIW+VENGTVE FPGTFEEYKEELQKEIKAEVDD
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
SwissProt top hitse value%identityAlignment
Q66H39 ATP-binding cassette sub-family F member 35.2e-0440.38Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAE
        +VLVSHD R I  VC+     E+W+ E G+V    G F++Y+  LQ++ + E
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAE
Q8K268 ATP-binding cassette sub-family F member 31.4e-0440.38Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAE
        ++LVSHD R I  VC+     E+W+ ENG+V    G F++Y+  LQ++ + E
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAE
Q8T6B4 ABC transporter F family member 43.1e-0442Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIV-ENGTVESFPGTFEEYKEELQKEI
        +VL+SH+  LI+ + E     +IW+V ++GT+  +PGTF +YK E+ +EI
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIV-ENGTVESFPGTFEEYKEELQKEI
Q9M1H3 ABC transporter F family member 42.0e-1980Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVC +EEKS+IW+VE+GTV  FPGTFEEYKE+LQ+EIKAEVD+
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
Q9USH9 Uncharacterized ABC transporter ATP-binding protein C825.012.8e-0543.64Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +V ++HD RLI +V E     EIWIV+NGTV+ F G   +YK  L+++I  E ++
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
Arabidopsis top hitse value%identityAlignment
AT1G64550.1 general control non-repressible 35.4e-0443.48Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQ
        I +VSHD  LIS   +     E+W+V +G +  F GTF +YK+ LQ
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQ
AT3G54540.1 general control non-repressible 41.4e-2080Show/hide
Query:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD
        +VLVSHDSRLISRVC +EEKS+IW+VE+GTV  FPGTFEEYKE+LQ+EIKAEVD+
Subjt:  IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGTTCTGGTTAGTCATGATTCTCGGCTCATATCACGTGTCTGCGAGGACGAAGAAAAAAGTGAAATTTGGATTGTCGAAAATGGTACCGTGGAGTCGTTCCCTGGAAC
TTTTGAAGAATACAAGGAAGAACTTCAAAAGGAGATTAAAGCTGAGGTTGATGAT
mRNA sequenceShow/hide mRNA sequence
ATTGTTCTGGTTAGTCATGATTCTCGGCTCATATCACGTGTCTGCGAGGACGAAGAAAAAAGTGAAATTTGGATTGTCGAAAATGGTACCGTGGAGTCGTTCCCTGGAAC
TTTTGAAGAATACAAGGAAGAACTTCAAAAGGAGATTAAAGCTGAGGTTGATGAT
Protein sequenceShow/hide protein sequence
IVLVSHDSRLISRVCEDEEKSEIWIVENGTVESFPGTFEEYKEELQKEIKAEVDD