; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008956 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008956
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGirdin-like
Genome locationscaffold399:140385..140563
RNA-Seq ExpressionMS008956
SyntenyMS008956
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.4e-0754.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]1.4e-0754.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
KAA0044912.1 girdin-like [Cucumis melo var. makuwa]1.4e-0754.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
KAA0046902.1 girdin-like [Cucumis melo var. makuwa]1.4e-0754.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
TYK16558.1 girdin-like [Cucumis melo var. makuwa]1.4e-0754.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein6.5e-0854.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
A0A5A7T5S7 Girdin-like6.5e-0854.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
A0A5A7TNJ1 Girdin-like6.5e-0854.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
A0A5D3BYI1 Girdin-like6.5e-0854.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
A0A5D3CZ50 Girdin-like6.5e-0854.24Show/hide
Query:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
        LSF  KL  ENVIW+A  +PL  + Y C D H+V LL PWG  NY PLLVL Q+   +F
Subjt:  LSFLKKLKIENVIWRALSIPLMPITYTCID-HNVALLDPWGSTNYAPLLVLHQICKDRF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTATCATTCTTGAAGAAGTTAAAAATTGAAAACGTAATATGGAGAGCTTTATCGATACCTTTAATGCCAATCACTTATACATGTATAGATCATAATGTTGCACTATTGGA
TCCTTGGGGAAGTACCAACTATGCGCCTCTTCTAGTTCTACACCAAATATGTAAGGACCGTTTC
mRNA sequenceShow/hide mRNA sequence
TTATCATTCTTGAAGAAGTTAAAAATTGAAAACGTAATATGGAGAGCTTTATCGATACCTTTAATGCCAATCACTTATACATGTATAGATCATAATGTTGCACTATTGGA
TCCTTGGGGAAGTACCAACTATGCGCCTCTTCTAGTTCTACACCAAATATGTAAGGACCGTTTC
Protein sequenceShow/hide protein sequence
LSFLKKLKIENVIWRALSIPLMPITYTCIDHNVALLDPWGSTNYAPLLVLHQICKDRF