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MS008959 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008959
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like
Genome locationscaffold399:145713..145960
RNA-Seq ExpressionMS008959
SyntenyMS008959
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147037.2 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic [Cucumis sativus]1.6e-1159.46Show/hide
Query:  MSSSNKKPT------SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        M+SSN++PT      SSLYP I MKDLA NLF DED PVS H++P+S E+VL++I G+I+HLIE++N++EL SG
Subjt:  MSSSNKKPT------SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
XP_008457682.1 PREDICTED: uncharacterized protein LOC103497324 [Cucumis melo]1.6e-1159.72Show/hide
Query:  MSSSNKKPT----SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        M+SSN++PT    SSLYP + MKDLA NLF DED PVS H++P+S E+VL++I G+I+HLIE++N++EL SG
Subjt:  MSSSNKKPT----SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
XP_022146239.1 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like [Momordica charantia]4.1e-1573.53Show/hide
Query:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        MSSSN+KPTSSLYP + MKDLA +LF DED PVS  ++PES EEVL+KI GSIVHLIE+EN+VEL SG
Subjt:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
XP_022971025.1 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like [Cucurbita maxima]4.0e-1061.76Show/hide
Query:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        MSSS+     SLYP + MKDLA NLF +ED PVS  ++ +SFE+VL+KI G IVHLIEK+N+VEL SG
Subjt:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
XP_038901694.1 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like [Benincasa hispida]9.6e-1260.81Show/hide
Query:  MSSSNKKPT------SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        M+SSN +PT      SSLYP I MKDLA NLF DED PVS H++P+S E+VL++I G+IVHLIE++N++EL SG
Subjt:  MSSSNKKPT------SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
TrEMBL top hitse value%identityAlignment
A0A0A0LJF8 Senescence domain-containing protein7.9e-1259.46Show/hide
Query:  MSSSNKKPT------SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        M+SSN++PT      SSLYP I MKDLA NLF DED PVS H++P+S E+VL++I G+I+HLIE++N++EL SG
Subjt:  MSSSNKKPT------SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
A0A1S3C5M8 uncharacterized protein LOC1034973247.9e-1259.72Show/hide
Query:  MSSSNKKPT----SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        M+SSN++PT    SSLYP + MKDLA NLF DED PVS H++P+S E+VL++I G+I+HLIE++N++EL SG
Subjt:  MSSSNKKPT----SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
A0A5D3BKR6 Protein EARLY-RESPONSIVE TO DEHYDRATION 77.9e-1259.72Show/hide
Query:  MSSSNKKPT----SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        M+SSN++PT    SSLYP + MKDLA NLF DED PVS H++P+S E+VL++I G+I+HLIE++N++EL SG
Subjt:  MSSSNKKPT----SSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
A0A6J1CXJ8 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like2.0e-1573.53Show/hide
Query:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        MSSSN+KPTSSLYP + MKDLA +LF DED PVS  ++PES EEVL+KI GSIVHLIE+EN+VEL SG
Subjt:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
A0A6J1I4K5 protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic-like1.9e-1061.76Show/hide
Query:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        MSSS+     SLYP + MKDLA NLF +ED PVS  ++ +SFE+VL+KI G IVHLIEK+N+VEL SG
Subjt:  MSSSNKKPTSSLYP-IHMKDLASNLFLDED-PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
SwissProt top hitse value%identityAlignment
F4JNX2 Senescence/dehydration-associated protein At4g35985, chloroplastic5.8e-0441.25Show/hide
Query:  SNKTQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDEDPV-SAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        ++ T  PL  S  SSS+    ++LYP I++ DL +N+F D     SA   P + EEV++ I G++VHLI+K  +VEL  G
Subjt:  SNKTQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDEDPV-SAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
O48832 Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic1.4e-0543.21Show/hide
Query:  TQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDED-----PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        T NP   + ++ S+   T++LYP + M DLA NLF ++      PVSA   P + EEV++KI G+I+HLI+K  +VEL  G
Subjt:  TQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDED-----PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
Arabidopsis top hitse value%identityAlignment
AT2G17840.1 Senescence/dehydration-associated protein-related9.9e-0743.21Show/hide
Query:  TQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDED-----PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        T NP   + ++ S+   T++LYP + M DLA NLF ++      PVSA   P + EEV++KI G+I+HLI+K  +VEL  G
Subjt:  TQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDED-----PVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
AT4G35985.1 Senescence/dehydration-associated protein-related4.1e-0541.25Show/hide
Query:  SNKTQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDEDPV-SAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG
        ++ T  PL  S  SSS+    ++LYP I++ DL +N+F D     SA   P + EEV++ I G++VHLI+K  +VEL  G
Subjt:  SNKTQNPLHNSLMSSSNKKPTSSLYP-IHMKDLASNLFLDEDPV-SAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCATTCCAATAAAACTCAAAACCCACTTCATAATTCATTAATGTCTTCGTCCAATAAAAAACCTACTTCTTCTCTGTATCCTATCCACATGAAAGACCTCGCATCTAA
TCTCTTTCTCGACGAAGACCCTGTTTCCGCTCACAGAAACCCCGAGTCCTTCGAAGAAGTCCTCATTAAGATTCTAGGCTCAATAGTTCATCTGATCGAAAAGGAAAACA
ATGTCGAACTCACTTCTGGC
mRNA sequenceShow/hide mRNA sequence
CTTCATTCCAATAAAACTCAAAACCCACTTCATAATTCATTAATGTCTTCGTCCAATAAAAAACCTACTTCTTCTCTGTATCCTATCCACATGAAAGACCTCGCATCTAA
TCTCTTTCTCGACGAAGACCCTGTTTCCGCTCACAGAAACCCCGAGTCCTTCGAAGAAGTCCTCATTAAGATTCTAGGCTCAATAGTTCATCTGATCGAAAAGGAAAACA
ATGTCGAACTCACTTCTGGC
Protein sequenceShow/hide protein sequence
LHSNKTQNPLHNSLMSSSNKKPTSSLYPIHMKDLASNLFLDEDPVSAHRNPESFEEVLIKILGSIVHLIEKENNVELTSG