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MS008961 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008961
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionIGR domain-containing protein
Genome locationscaffold399:165289..169891
RNA-Seq ExpressionMS008961
SyntenyMS008961
Gene Ontology termsNA
InterPro domainsIPR013761 - Sterile alpha motif/pointed domain superfamily
IPR019083 - IGR protein motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590496.1 hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sororia]4.9e-5192.66Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW
        RMAWRQIFSN+RSILQPYS PLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW

Query:  RPRADSMKA
        RPR+D++KA
Subjt:  RPRADSMKA

KAG7024029.1 hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-5092.59Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR
        MAWRQIFSN+RSILQPYS PLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR

Query:  PRADSMKA
        PR+D++KA
Subjt:  PRADSMKA

XP_022154599.1 uncharacterized protein LOC111021823 [Momordica charantia]9.5e-55100Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR
        MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR

Query:  PRADSMKA
        PRADSMKA
Subjt:  PRADSMKA

XP_022155728.1 uncharacterized protein LOC111022782 isoform X1 [Momordica charantia]5.8e-5296.3Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW

Query:  RPRADSMK
        RPRADSMK
Subjt:  RPRADSMK

XP_022155738.1 uncharacterized protein LOC111022782 isoform X2 [Momordica charantia]5.8e-5296.3Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW

Query:  RPRADSMK
        RPRADSMK
Subjt:  RPRADSMK

TrEMBL top hitse value%identityAlignment
A0A6J1DML5 uncharacterized protein LOC1110218234.6e-55100Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR
        MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR

Query:  PRADSMKA
        PRADSMKA
Subjt:  PRADSMKA

A0A6J1DNQ6 uncharacterized protein LOC111022782 isoform X12.8e-5296.3Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW

Query:  RPRADSMK
        RPRADSMK
Subjt:  RPRADSMK

A0A6J1DNR1 uncharacterized protein LOC111022782 isoform X22.8e-5296.3Show/hide
Query:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW
        RMAWRQIFSNNRSILQPYSAPL+ARFFSKSTPYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLK+LGIPCK RKLILKYIHKYRLGLW
Subjt:  RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLW

Query:  RPRADSMK
        RPRADSMK
Subjt:  RPRADSMK

A0A6J1HA49 uncharacterized protein LOC1114619919.9e-5091.67Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR
        MAWRQI SN+RS LQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR

Query:  PRADSMKA
        PR+D++KA
Subjt:  PRADSMKA

A0A6J1HZ75 uncharacterized protein LOC1114679433.4e-5092.52Show/hide
Query:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR
        MAWRQI SN+RSILQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWR
Subjt:  MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWR

Query:  PRADSMK
        PR+D++K
Subjt:  PRADSMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05810.1 FUNCTIONS IN: molecular_function unknown1.1e-3262.5Show/hide
Query:  MAWRQIFSNNRSIL---QPYSAPLFARFF-SKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRL
        MAW ++  + R+ L   Q  S     RF  SK   Y VKVGIPEFL G+G G E+H+ K+E+EIGD  KLLVTRTL+LKKLGIPCKHRKLILKY  KYRL
Subjt:  MAWRQIFSNNRSIL---QPYSAPLFARFF-SKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRL

Query:  GLWRPRADSMKA
        GLW+PRAD++KA
Subjt:  GLWRPRADSMKA

AT5G26800.1 FUNCTIONS IN: molecular_function unknown5.6e-3767.86Show/hide
Query:  MAWRQIFSNNRSIL--QPYSAPL-FARFFSKS-TPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRL
        MAW ++  + RS+L   P S+ L F RF+SKS  PY VKVGIPEFL+G+G GVE+H+ KLE+E+GD  KLLVTRTL+LKK GIPCKHRKLILKY HKYRL
Subjt:  MAWRQIFSNNRSIL--QPYSAPL-FARFFSKS-TPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRL

Query:  GLWRPRADSMKA
        GLW+PRAD++KA
Subjt:  GLWRPRADSMKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGATGGCATGGAGGCAGATTTTCTCCAACAATAGGTCAATACTCCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCAACCCCATATGTCGTGAAAGT
CGGGATACCAGAGTTTTTAAATGGCGTTGGGCATGGGGTGGAGTCACATGTGCCCAAACTTGAATCAGAGATTGGAGACTTCCAAAAGTTGCTCGTCACTCGCACACTTA
AGCTGAAAAAACTTGGAATCCCATGCAAACATAGGAAGCTGATATTGAAGTATATTCACAAGTATAGGCTTGGACTATGGAGGCCCCGAGCTGACTCCATGAAGGCC
mRNA sequenceShow/hide mRNA sequence
AGGATGGCATGGAGGCAGATTTTCTCCAACAATAGGTCAATACTCCAACCATACTCAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCAACCCCATATGTCGTGAAAGT
CGGGATACCAGAGTTTTTAAATGGCGTTGGGCATGGGGTGGAGTCACATGTGCCCAAACTTGAATCAGAGATTGGAGACTTCCAAAAGTTGCTCGTCACTCGCACACTTA
AGCTGAAAAAACTTGGAATCCCATGCAAACATAGGAAGCTGATATTGAAGTATATTCACAAGTATAGGCTTGGACTATGGAGGCCCCGAGCTGACTCCATGAAGGCC
Protein sequenceShow/hide protein sequence
RMAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWRPRADSMKA