CuGenDBv2

Gene ID	MS008967
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein TIC 214
Genome location	scaffold399:214862..215050
RNA-Seq Expression	MS008967
Synteny	MS008967
Gene Ontology terms	GO:0015031 - protein transport (biological process) GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR008896 - Protein TIC214

Homology

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GenBank top hits

e value

%identity

Alignment

ALF03359.1 hypothetical protein CsCp113 [Cucumis sativus var. hardwickii]

5.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

QJD26342.1 Ycf1 [Trichosanthes kirilowii]

5.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

YP_009430686.1 photosystem I assembly protein Ycf1 [Gynostemma cardiospermum]

5.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

YP_009738261.1 Ycf1 [Siraitia siamensis]

5.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]

5.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

TrEMBL top hits

e value

%identity

Alignment

A0A1P8LE53 Ycf1

2.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

A0A1X9Q205 Protein TIC 214

2.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

A0A218KG90 Protein TIC 214

2.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

A0A6M3RWE9 Protein TIC 214

2.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

A0A6M3S424 Protein TIC 214

2.9e-25

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

SwissProt top hits

e value

%identity

Alignment

A4GYX4 Protein TIC 214

3.9e-27

96.83

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

Q09WW0 Protein TIC 214

3.9e-27

96.83

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

Q0G9Q4 Protein TIC 214

1.1e-26

95.24

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSML RLVNI MFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

Q14FA0 Protein TIC 214

3.9e-27

96.83

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNI MFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

Q4VZL0 Protein TIC 214

7.8e-28

98.41

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

Arabidopsis top hits

e value

%identity

Alignment

AT2G07739.1 Ycf1 protein

4.4e-18

86.54

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFV
        M NL IQCVF NNLIF+LFNH ILPSSML RLVNI MFRCNNKMLFVTSSFV
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFV

ATCG01000.1 Ycf1 protein

3.0e-27

93.65

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NL IQCVFLNNLIFQLFNHFILPSSML RLVNI MFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

ATCG01130.1 Ycf1 protein

3.0e-27

93.65

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK
        M NL IQCVFLNNLIFQLFNHFILPSSML RLVNI MFRCNNKMLFVTSSFVGWLIGHILFMK
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

ATMG00370.1 Ycf1 protein

4.4e-18

86.54

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Query:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFV
        M NL IQCVF NNLIF+LFNH ILPSSML RLVNI MFRCNNKMLFVTSSFV
Subjt:  MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFV

Sequences

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CDS sequence

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ATGCATAATCTTAGTATTCAATGTGTATTCCTAAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTAT
GTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAA

mRNA sequence

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ATGCATAATCTTAGTATTCAATGTGTATTCCTAAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTAT
GTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAA

Protein sequence

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MHNLSIQCVFLNNLIFQLFNHFILPSSMLVRLVNISMFRCNNKMLFVTSSFVGWLIGHILFMK

MS008967 (gene) of Bitter gourd (TR) v1 genome