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MS008979 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008979
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H dehydrogenase subunit 5
Genome locationscaffold399:307443..308250
RNA-Seq ExpressionMS008979
SyntenyMS008979
Gene Ontology termsGO:0009536 - plastid (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB56973.1 hypothetical protein L484_000755 [Morus notabilis]2.5e-0875Show/hide
Query:  NSSSFGNEHAEPNLLHVKPALFRSGKSYGLMKPCAMARIRRQSY
        + +S      EPNLLHVKPALFRSGKSYG MKPCAMARIR QSY
Subjt:  NSSSFGNEHAEPNLLHVKPALFRSGKSYGLMKPCAMARIRRQSY

KAB5511226.1 hypothetical protein DKX38_030151 [Salix brachista]1.8e-1443.18Show/hide
Query:  MSCWHQSSILSLWIEEKGGS--------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMSRKVVQFSGSRRGMETHKNSRMEMENRCNSSSFGNEH
        M+CW+QS ILSLW EEK  S        A +  WTLMSIRMNHPFHGGKSLPARQED+KLQI+SR       +  GM     S  +   +  +++ G  H
Subjt:  MSCWHQSSILSLWIEEKGGS--------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMSRKVVQFSGSRRGMETHKNSRMEMENRCNSSSFGNEH

Query:  AEPNLLHVKPALFRSGKSYGLMKPCAMARIRR
           +    +  +FR+G+      P   A I+R
Subjt:  AEPNLLHVKPALFRSGKSYGLMKPCAMARIRR

KAF1876802.1 hypothetical protein Lal_00043441 [Lupinus albus]2.1e-0745.57Show/hide
Query:  MSCWHQSSILSLWIEEKGGS-----------------------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS
        M+CWHQS I       KG                         A +  WTLMSIR+NHPFHGGKSLPARQED+K +I+S
Subjt:  MSCWHQSSILSLWIEEKGGS-----------------------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS

RYR17071.1 hypothetical protein Ahy_B03g061874 [Arachis hypogaea]3.9e-0687.1Show/hide
Query:  WTLMSIRMNHPFHGGKSLPARQEDNKLQIMS
        WTLMSIR N+PFHGGKSLPARQED+KLQI+S
Subjt:  WTLMSIRMNHPFHGGKSLPARQEDNKLQIMS

RYR17226.1 hypothetical protein Ahy_B03g061995 [Arachis hypogaea]2.1e-0746.91Show/hide
Query:  MSCWHQSSILSLWIEEKGGSAGRG-------------------------FWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS
        M+CWHQS ILSL+   +   A R                           WTLMSIR N+PFH GKSLPARQED+KLQI+S
Subjt:  MSCWHQSSILSLWIEEKGGSAGRG-------------------------FWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS

TrEMBL top hitse value%identityAlignment
A0A0A0L231 Uncharacterized protein2.1e-6685.33Show/hide
Query:  GYLYDPIDCVKPAIATEPGEILSSVMSCWHQSSILSLWIEEKGGSAGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMSRKVVQFSGSRRGMETHKNS
        GYLYDPIDCVKPA+ATEPG           +SSI SLWIEEKGGSAGRGFWTLMSIRMNHPFHGGKSLPARQED+KLQI+SRKVV FSGSRRG+ETHKNS
Subjt:  GYLYDPIDCVKPAIATEPGEILSSVMSCWHQSSILSLWIEEKGGSAGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMSRKVVQFSGSRRGMETHKNS

Query:  RMEMENRCNSSSFGNEHAEPNLLHVKPALFRSGKSYGLMKPCAMARIRRQ
         MEME RCNSSSFGNEHAEPNLLHVKPALFRSGKSYG MKPCAMARIR Q
Subjt:  RMEMENRCNSSSFGNEHAEPNLLHVKPALFRSGKSYGLMKPCAMARIRRQ

A0A444ZST6 Uncharacterized protein1.0e-0746.91Show/hide
Query:  MSCWHQSSILSLWIEEKGGSAGRG-------------------------FWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS
        M+CWHQS ILSL+   +   A R                           WTLMSIR N+PFH GKSLPARQED+KLQI+S
Subjt:  MSCWHQSSILSLWIEEKGGSAGRG-------------------------FWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS

A0A5N5IXQ9 Uncharacterized protein ycf688.5e-1543.18Show/hide
Query:  MSCWHQSSILSLWIEEKGGS--------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMSRKVVQFSGSRRGMETHKNSRMEMENRCNSSSFGNEH
        M+CW+QS ILSLW EEK  S        A +  WTLMSIRMNHPFHGGKSLPARQED+KLQI+SR       +  GM     S  +   +  +++ G  H
Subjt:  MSCWHQSSILSLWIEEKGGS--------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMSRKVVQFSGSRRGMETHKNSRMEMENRCNSSSFGNEH

Query:  AEPNLLHVKPALFRSGKSYGLMKPCAMARIRR
           +    +  +FR+G+      P   A I+R
Subjt:  AEPNLLHVKPALFRSGKSYGLMKPCAMARIRR

A0A6A5N1D4 Uncharacterized protein1.0e-0745.57Show/hide
Query:  MSCWHQSSILSLWIEEKGGS-----------------------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS
        M+CWHQS I       KG                         A +  WTLMSIR+NHPFHGGKSLPARQED+K +I+S
Subjt:  MSCWHQSSILSLWIEEKGGS-----------------------AGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMS

W9R592 Uncharacterized protein1.2e-0875Show/hide
Query:  NSSSFGNEHAEPNLLHVKPALFRSGKSYGLMKPCAMARIRRQSY
        + +S      EPNLLHVKPALFRSGKSYG MKPCAMARIR QSY
Subjt:  NSSSFGNEHAEPNLLHVKPALFRSGKSYGLMKPCAMARIRRQSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGATAGCAACGGAACCGGGGGAAATCCTTTCTTCCGTGATGAGCTGTTGGCACCAGTCCTCCATTTTGTCTCT
GTGGATCGAGGAGAAAGGGGGCTCGGCGGGAAGAGGATTTTGGACTCTCATGTCGATTCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGG
ATAACAAGTTACAAATTATGTCGCGAAAAGTTGTTCAGTTTTCGGGGTCTCGAAGAGGCATGGAAACACATAAAAACTCTAGAATGGAAATGGAAAATAGATGTAACTCC
AGTTCCTTTGGAAATGAACATGCTGAGCCGAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCAGGAAAATCGTATGGTTTGATGAAACCATGTGCTATGGCTCGAAT
TCGTAGGCAATCCTAT
mRNA sequenceShow/hide mRNA sequence
GGATATCTATATGATCCGATTGATTGCGTAAAGCCCGCGATAGCAACGGAACCGGGGGAAATCCTTTCTTCCGTGATGAGCTGTTGGCACCAGTCCTCCATTTTGTCTCT
GTGGATCGAGGAGAAAGGGGGCTCGGCGGGAAGAGGATTTTGGACTCTCATGTCGATTCGAATGAATCATCCTTTCCACGGAGGTAAATCTTTGCCTGCTAGGCAAGAGG
ATAACAAGTTACAAATTATGTCGCGAAAAGTTGTTCAGTTTTCGGGGTCTCGAAGAGGCATGGAAACACATAAAAACTCTAGAATGGAAATGGAAAATAGATGTAACTCC
AGTTCCTTTGGAAATGAACATGCTGAGCCGAATCTTCTTCATGTAAAACCTGCTTTATTTAGATCAGGAAAATCGTATGGTTTGATGAAACCATGTGCTATGGCTCGAAT
TCGTAGGCAATCCTAT
Protein sequenceShow/hide protein sequence
GYLYDPIDCVKPAIATEPGEILSSVMSCWHQSSILSLWIEEKGGSAGRGFWTLMSIRMNHPFHGGKSLPARQEDNKLQIMSRKVVQFSGSRRGMETHKNSRMEMENRCNS
SSFGNEHAEPNLLHVKPALFRSGKSYGLMKPCAMARIRRQSY