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MS008983 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008983
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit H protein
Genome locationscaffold399:314907..315083
RNA-Seq ExpressionMS008983
SyntenyMS008983
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK94650.1 unknown [Populus trichocarpa]1.4e-2391.53Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITG KVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
CAF4958888.1 unnamed protein product [Pieris macdunnoughi]1.4e-2391.53Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITG KVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
KAD5961253.1 hypothetical protein E3N88_12726 [Mikania micrantha]2.1e-2493.22Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITGFKVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
KAG2239904.1 hypothetical protein Bca52824_091263 [Brassica carinata]1.4e-2391.53Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITG KVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
TKS04869.1 hypothetical protein D5086_0000138580 [Populus alba]1.4e-2391.53Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITG KVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
TrEMBL top hitse value%identityAlignment
A0A3P6DE90 Uncharacterized protein6.6e-2491.53Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITG KVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
A0A5J5UE19 Uncharacterized protein6.6e-2489.83Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL +KHCFGTGRESGTKSRQTLNTRYDLKITG +VGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
A0A5N6P8W7 Uncharacterized protein1.0e-2493.22Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITGFKVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
A0A6J5V4Y5 Uncharacterized protein6.6e-2491.53Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITG KVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
A9PE47 Uncharacterized protein6.6e-2491.53Show/hide
Query:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
        MPLEPRASW SPKC+EAQQLTGHL VKHCFG GRESGTKSRQTLNTRYDLKITG KVGQ
Subjt:  MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACTCGAACCCAGAGCTAGCTGGTTATCCCCGAAATGCATTGAGGCGCAGCAGTTGACTGGACATCTAAGGGTAAAGCACTGTTTCGGTACGGGCCGTGAGAGCGG
TACCAAATCGAGGCAAACTCTGAATACTAGATATGATCTCAAAATAACAGGGTTCAAGGTCGGCCAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACTCGAACCCAGAGCTAGCTGGTTATCCCCGAAATGCATTGAGGCGCAGCAGTTGACTGGACATCTAAGGGTAAAGCACTGTTTCGGTACGGGCCGTGAGAGCGG
TACCAAATCGAGGCAAACTCTGAATACTAGATATGATCTCAAAATAACAGGGTTCAAGGTCGGCCAG
Protein sequenceShow/hide protein sequence
MPLEPRASWLSPKCIEAQQLTGHLRVKHCFGTGRESGTKSRQTLNTRYDLKITGFKVGQ