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MS008985 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008985
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBnaC09g29120D protein
Genome locationscaffold399:316787..317155
RNA-Seq ExpressionMS008985
SyntenyMS008985
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4269449.1 unnamed protein product [Prunus armeniaca]1.8e-5785.5Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRS PAG ENPS        LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSY LRTWLPS+YRGHDNWYTR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

KAB1210637.1 hypothetical protein CJ030_MR6G010321 [Morella rubra]4.7e-5886.26Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRSIPAG ENPS        LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSY LRTWLPS+YRGHDNWYTR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

KAG4109275.1 hypothetical protein ERO13_1Z049781v2 [Gossypium hirsutum]1.0e-5785.5Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP--------SLWGSRNRRALILGWAYYLDAF
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFC SIPAG ENP         LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP--------SLWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSYLLRTWLPS+YRGHDNWYTR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

OMP13171.1 hypothetical protein COLO4_02154 [Corchorus olitorius]1.8e-5785.5Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP--------SLWGSRNRRALILGWAYYLDAF
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRSIPAG ENP         LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP--------SLWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSY LRTWLPS+YRGHDNWYTR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

PQP98135.1 hypothetical protein Pyn_20558 [Prunus yedoensis var. nudiflora]1.0e-5789.52Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP-SLWGSRNRRALILGWAYYLDAFSSYLLRT
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRS PAG ENP  LWGSRNRRALILGWAYYLDAFSSY LRT
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP-SLWGSRNRRALILGWAYYLDAFSSYLLRT

Query:  WLPSIYRGHDNWYTRCASFPVLSY
        WLPS+YRGHDNWYTR ASFPVLSY
Subjt:  WLPSIYRGHDNWYTRCASFPVLSY

TrEMBL top hitse value%identityAlignment
A0A2N9HQ72 Uncharacterized protein2.3e-5886.26Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRSIPAG ENPS        LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSY LRTWLPS+YRGHDNWYTR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

A0A314Z8N2 Uncharacterized protein5.0e-5889.52Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP-SLWGSRNRRALILGWAYYLDAFSSYLLRT
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRS PAG ENP  LWGSRNRRALILGWAYYLDAFSSY LRT
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENP-SLWGSRNRRALILGWAYYLDAFSSYLLRT

Query:  WLPSIYRGHDNWYTRCASFPVLSY
        WLPS+YRGHDNWYTR ASFPVLSY
Subjt:  WLPSIYRGHDNWYTRCASFPVLSY

A0A6A1VFM0 Uncharacterized protein2.3e-5886.26Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF
        MKIDG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRSIPAG ENPS        LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSY LRTWLPS+YRGHDNWYTR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

A0A7N2N6W3 Uncharacterized protein5.0e-5885.5Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF
        MK+DG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMIN SSRRDLLLN QNFCRSIPAG ENPS        LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSY LRTWLPS+YRGHDNWYTR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

A0A7N2N997 Uncharacterized protein6.6e-5885.5Show/hide
Query:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF
        MK+DG+CLIELIGSCRNKVQVYR VRMPQLHT LHFHLTP+VMINSSSRRDLLLN QNFCRSIPAG ENPS        LWGSRNRRALILGWAYYLDAF
Subjt:  MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPS--------LWGSRNRRALILGWAYYLDAF

Query:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY
        SSY LRTWLPS+YRGHDNW+TR ASFPVLSY
Subjt:  SSYLLRTWLPSIYRGHDNWYTRCASFPVLSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAGATGGCGACTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTTTGTTAGGATGCCTCAGCTGCATACATTACTGCACTTCCA
CTTGACACCTATGGTGATGATAAACAGCTCATCTCGCCGTGACCTTCTCTTGAATTTTCAAAACTTCTGTCGCTCCATCCCTGCAGGGGTAGAGAACCCATCGCTCTGGG
GAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTATTACTTAGATGCCTTCAGCAGTTATCTGCTCCGCACTTGGCTACCCAGCATTTACCGTGGGCACGATAAC
TGGTACACCAGATGTGCGTCCTTCCCGGTCCTCTCGTAC
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAGATGGCGACTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTTTGTTAGGATGCCTCAGCTGCATACATTACTGCACTTCCA
CTTGACACCTATGGTGATGATAAACAGCTCATCTCGCCGTGACCTTCTCTTGAATTTTCAAAACTTCTGTCGCTCCATCCCTGCAGGGGTAGAGAACCCATCGCTCTGGG
GAAGTCGGAATAGGAGAGCACTCATCTTGGGGTGGGCTTATTACTTAGATGCCTTCAGCAGTTATCTGCTCCGCACTTGGCTACCCAGCATTTACCGTGGGCACGATAAC
TGGTACACCAGATGTGCGTCCTTCCCGGTCCTCTCGTAC
Protein sequenceShow/hide protein sequence
MKIDGDCLIELIGSCRNKVQVYRFVRMPQLHTLLHFHLTPMVMINSSSRRDLLLNFQNFCRSIPAGVENPSLWGSRNRRALILGWAYYLDAFSSYLLRTWLPSIYRGHDN
WYTRCASFPVLSY