; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008988 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008988
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein TIC 214
Genome locationscaffold399:322724..323206
RNA-Seq ExpressionMS008988
SyntenyMS008988
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008896 - Protein TIC214


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009456120.1 Ycf1 [Momordica charantia]7.2e-8395.65Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHK KYQINQRYQEKRYPDKKSF+ESI IHQKTNENRA NHYDLLVPENIL+PRGRREFRI ICFNSRNINDIHRNTAFYNANKVKTR QV
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

YP_009738261.1 Ycf1 [Siraitia siamensis]1.2e-8295.65Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHKNKYQINQRYQEK YPDKKSFAESI IHQKTNENR  NHYDLLVPENILSPRGRREFRILICFNSRN NDIHRNTAFYNANKVKTRD+V
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

YP_009752977.1 Ycf1 protein [Momordica sessilifolia]5.5e-8396.27Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHKNKYQINQRYQEK YPDKKSFAESI IHQKTNENRA NHYDLLVPENILSPRGRREFRILICFNSRN NDIHRNTAFYNANKVKTRDQV
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYP+LKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

YP_009753303.1 Ycf1 protein [Nothoalsomitra suberosa]2.7e-8294.41Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISL+HKNKYQINQRYQEK YPDKKSFAESI IHQKTNENR  NHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKT D+V
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYR EDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

YP_009753666.1 Ycf1 protein [Trichosanthes wallichiana]3.5e-8295.65Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHKNKYQINQRYQEK YPDKKSFAESI IHQKTNENR  NHYDLLVPENILSPRGRREFRILICFNSRN NDIHRNTAFYNANKVKT DQV
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

TrEMBL top hitse value%identityAlignment
A0A2I6C033 Protein TIC 2143.5e-8395.65Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHK KYQINQRYQEKRYPDKKSF+ESI IHQKTNENRA NHYDLLVPENIL+PRGRREFRI ICFNSRNINDIHRNTAFYNANKVKTR QV
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A6C0U995 Protein TIC 2145.9e-8395.65Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHKNKYQINQRYQEK YPDKKSFAESI IHQKTNENR  NHYDLLVPENILSPRGRREFRILICFNSRN NDIHRNTAFYNANKVKTRD+V
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A6H0ESM5 Protein TIC 2141.7e-8295.65Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHKNKYQINQRYQEK YPDKKSFAESI IHQKTNENR  NHYDLLVPENILSPRGRREFRILICFNSRN NDIHRNTAFYNANKVKT DQV
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A6H0EWY1 Protein TIC 2142.7e-8396.27Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLVHKNKYQINQRYQEK YPDKKSFAESI IHQKTNENRA NHYDLLVPENILSPRGRREFRILICFNSRN NDIHRNTAFYNANKVKTRDQV
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYP+LKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

A0A6H0EX31 Protein TIC 2141.3e-8294.41Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISL+HKNKYQINQRYQEK YPDKKSFAESI IHQKTNENR  NHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKT D+V
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRYKNKLNK KFFLWPNYR EDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

SwissProt top hitse value%identityAlignment
A0ZZ93 Protein TIC 2147.2e-5469.81Show/hide
Query:  QTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQVLD
        QTI I LVHKNK+QINQRYQEK Y DK  F E I  HQK  EN+ +NHYDL VPENILSP  RRE RI I FNSR+ N +HRN  F   N VK   QVL 
Subjt:  QTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQVLD

Query:  KRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        K +KHLD  K KL K KFFLWPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+LKIR
Subjt:  KRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q14FA0 Protein TIC 2145.2e-5265.84Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        M QTI I LVHK K QINQRY++K Y DKK+F ESIVI+Q    N+ +N+YDLLVPEN+LS + RRE RILI FNS+N NDI  NT   N N +K    +
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        +DK SK  DR KNKL K K FLWPNYRLEDLAC+NRYWFDTNN+SRFSM+RIH+ P+LKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q2L951 Protein TIC 2147.2e-5469.81Show/hide
Query:  QTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQVLD
        QTI I LVHKNK+QINQRYQEK Y DK  F E I  HQK  EN+ +NHYDL VPENILSP  RRE RI I FNSR+ N +HRN  F   N VK   QVL 
Subjt:  QTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQVLD

Query:  KRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        K +KHLD  K KL K KFFLWPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+LKIR
Subjt:  KRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q4VZL0 Protein TIC 2143.3e-7586.34Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        MSQTIGISLV KNKYQ+NQRYQEK YP K+SFAESI IHQK  ENR  NHYDLLVPENILSPRGRREFRILICFNS N NDIHRNTAF + NKVKT DQV
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
        LDKRSKHLDRY+N+L   K FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Q7YJS6 Protein TIC 2143.0e-5268.59Show/hide
Query:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV
        M QTIGISLVHKNK+Q N+RY+EKRY D+  F  SI  H K   NRA N YDLLVPENILSPR RRE RILI FNS N N + RN  F+N N VK   Q 
Subjt:  MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQV

Query:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYP
        LD+  KH+D   NK  +FK FLWPNYRLEDLAC+NRYWFDTNN SRFSMLRIHMYP
Subjt:  LDKRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYP

Arabidopsis top hitse value%identityAlignment
ATCG01130.1 Ycf1 protein4.0e-3951.9Show/hide
Query:  QTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQVLD
        +TIGISLVHKNK++I++RY++K Y +KK F +SI  +Q    N+ +N+YD  VPE ILSP+ RREFRILICFN +  N    N+ F + N       +  
Subjt:  QTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQVLD

Query:  KRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKI
        K+   LD+ KN L   K FLWPN++LEDLACMNRYWF+T N + FSM+RI MY +  I
Subjt:  KRSKHLDRYKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAACCATAGGTATTTCGTTAGTTCATAAGAATAAGTACCAAATTAATCAAAGATATCAAGAAAAACGCTATCCTGATAAGAAGAGTTTTGCTGAATCCATTGT
AATACATCAAAAAACGAATGAAAATAGAGCCAGAAATCATTATGATTTGCTTGTTCCTGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTCAGAATTCTAATTTGTT
TCAATTCTCGGAATATAAATGATATCCATAGAAATACAGCATTTTACAATGCAAATAAGGTGAAAACTCGTGATCAAGTTTTAGATAAAAGAAGCAAACATCTTGATAGA
TATAAAAATAAACTAAATAAATTCAAGTTCTTTCTTTGGCCGAATTATCGATTAGAAGATTTAGCTTGTATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTT
TAGTATGCTAAGAATCCATATGTATCCACAATTGAAAATTCGT
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAACCATAGGTATTTCGTTAGTTCATAAGAATAAGTACCAAATTAATCAAAGATATCAAGAAAAACGCTATCCTGATAAGAAGAGTTTTGCTGAATCCATTGT
AATACATCAAAAAACGAATGAAAATAGAGCCAGAAATCATTATGATTTGCTTGTTCCTGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTCAGAATTCTAATTTGTT
TCAATTCTCGGAATATAAATGATATCCATAGAAATACAGCATTTTACAATGCAAATAAGGTGAAAACTCGTGATCAAGTTTTAGATAAAAGAAGCAAACATCTTGATAGA
TATAAAAATAAACTAAATAAATTCAAGTTCTTTCTTTGGCCGAATTATCGATTAGAAGATTTAGCTTGTATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTT
TAGTATGCTAAGAATCCATATGTATCCACAATTGAAAATTCGT
Protein sequenceShow/hide protein sequence
MSQTIGISLVHKNKYQINQRYQEKRYPDKKSFAESIVIHQKTNENRARNHYDLLVPENILSPRGRREFRILICFNSRNINDIHRNTAFYNANKVKTRDQVLDKRSKHLDR
YKNKLNKFKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR