; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008989 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008989
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationscaffold399:325129..325551
RNA-Seq ExpressionMS008989
SyntenyMS008989
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR018086 - NADH:ubiquinone oxidoreductase, subunit 1, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QZL38650.1 NADH dehydrogenase subunit A [Citrullus naudinianus]3.2e-6393.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDT QVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

YP_009456117.1 NADH dehydrogenase subunit 1 [Momordica charantia]1.9e-6393.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT  VL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

YP_009738258.1 NADH dehydrogenase subunit 1 [Siraitia siamensis]1.9e-6393.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

YP_009752720.1 NADH dehydrogenase subunit A [Ampelosycios humblotii]1.9e-6393.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

YP_009752884.1 NADH dehydrogenase subunit A [Baijiania yunnanensis]1.9e-6393.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

TrEMBL top hitse value%identityAlignment
A0A1P8LE62 NADH-quinone oxidoreductase subunit H1.6e-6393.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDT QVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

A0A2I6C034 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic9.2e-6493.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT  VL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

A0A6C0U9F1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic9.2e-6493.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

A0A6H0ESD3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic9.2e-6493.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

A0A6H0EX57 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic9.2e-6493.62Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTPQVQDIN+FSRL+ LKEVYGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

SwissProt top hitse value%identityAlignment
A0A390 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.6e-5982.98Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDT ++Q IN+F +L+ LKEVYGI+W+L+PI T VLGIT GVL IVWLEREIS GIQQ+IG EYAGPLG+LQALADGTKLLFKENL PSRGD RLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADL IGVFLWIAISS+A
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

Q0ZIW3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.0e-6084.4Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDTP+VQDIN+FSRL+ LKEVYGI+W+LVPI T VLGIT GVL IVWLEREIS GIQQ+IG EYAGPLG+LQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSY +IPFG  LVL+DL+IGVFLWIAISS+A
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

Q14FA3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.6e-5984.4Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDT  VQ IN+FSRL  L EVYGI+W+LVPILT VLGIT G+L IVWLEREIS GIQQ+IG EYAGP GVLQALADGTKLLFKENLFPSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVIS LLSYSVIPFGY  VLADL+IGVFLWIAISS+A
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

Q1KXQ8 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.0e-6085.82Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDT +VQ IN+FSRL+ LKEVYGI+WVL+PI T VLGIT GVL IVWLEREIS GIQQ+IG EYAGPLG+LQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSY VIPFGYRLVLADL IGVFLWIAISS+A
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic4.4e-6390.78Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MIIDT QVQDI++FSRL+ LKE YGILWVLVPILTTVLGIT GVL IVWLEREIS GIQQ+IG EYAGPLGVLQALADGTKLLFKENL PSRGDTRLFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPFGYRLVLADL IGVFLWIAISSVA
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

Arabidopsis top hitse value%identityAlignment
AT2G07785.1 NADH dehydrogenase family protein8.9e-1139.76Show/hide
Query:  IQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSV
        +Q++ G +  G  G+LQ LADG+KL+ KE + PS  +  LF + P    +  L++ +V+PF Y +VL+D +IG+    AISS+
Subjt:  IQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSV

ATCG01100.1 NADH dehydrogenase family protein2.9e-5477.3Show/hide
Query:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI
        MII    VQ IN+F +L+ LKEVYG++W+ VPI + VLGI TGVL IVWLEREIS GIQQ+IG EYAGPLG+LQALADGTKLLFKENL PSRG+T LFSI
Subjt:  MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSI

Query:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA
        GPSIAVISILLSYSVIPF   LVLADL+IG+FLWIAISS+A
Subjt:  GPSIAVISILLSYSVIPFGYRLVLADLHIGVFLWIAISSVA

ATMG00516.1 NADH dehydrogenase 1C2.5e-1337.39Show/hide
Query:  WVLVP--ILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLA
        ++ VP  IL  +L +  GV  +V  ER++   +Q++ G +  G  G+LQ LADG+KL+ KE + PS  +  LF + P    +  L++ +V+PF Y +VL+
Subjt:  WVLVP--ILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLA

Query:  DLHIGVFLWIAISSV
        D +IG+    AISS+
Subjt:  DLHIGVFLWIAISSV

ATMG01120.1 NADH dehydrogenase 1B2.5e-1337.39Show/hide
Query:  WVLVP--ILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLA
        ++ VP  IL  +L +  GV  +V  ER++   +Q++ G +  G  G+LQ LADG+KL+ KE + PS  +  LF + P    +  L++ +V+PF Y +VL+
Subjt:  WVLVP--ILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLA

Query:  DLHIGVFLWIAISSV
        D +IG+    AISS+
Subjt:  DLHIGVFLWIAISSV

ATMG01275.1 NADH dehydrogenase 1A2.5e-1337.39Show/hide
Query:  WVLVP--ILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLA
        ++ VP  IL  +L +  GV  +V  ER++   +Q++ G +  G  G+LQ LADG+KL+ KE + PS  +  LF + P    +  L++ +V+PF Y +VL+
Subjt:  WVLVP--ILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFGYRLVLA

Query:  DLHIGVFLWIAISSV
        D +IG+    AISS+
Subjt:  DLHIGVFLWIAISSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAATTGATACACCACAAGTACAAGATATCAATGCTTTTTCTAGATTGGACATTTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTTCCTATTTTGACTACTGT
ATTGGGAATCACAACAGGCGTACTAGAAATTGTATGGTTAGAAAGAGAAATATCCGTTGGGATACAACAACAGATTGGAACTGAATATGCTGGTCCTTTGGGAGTTCTTC
AAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATTTGTTTCCATCAAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTA
CTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCT
mRNA sequenceShow/hide mRNA sequence
ATGATAATTGATACACCACAAGTACAAGATATCAATGCTTTTTCTAGATTGGACATTTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTTCCTATTTTGACTACTGT
ATTGGGAATCACAACAGGCGTACTAGAAATTGTATGGTTAGAAAGAGAAATATCCGTTGGGATACAACAACAGATTGGAACTGAATATGCTGGTCCTTTGGGAGTTCTTC
AAGCTTTAGCAGATGGTACAAAACTACTTTTTAAAGAAAATTTGTTTCCATCAAGAGGTGATACTCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTA
CTAAGCTATTCAGTAATTCCTTTTGGTTATCGCCTTGTTTTAGCCGATCTCCATATCGGTGTTTTTTTATGGATTGCCATTTCAAGTGTTGCT
Protein sequenceShow/hide protein sequence
MIIDTPQVQDINAFSRLDILKEVYGILWVLVPILTTVLGITTGVLEIVWLEREISVGIQQQIGTEYAGPLGVLQALADGTKLLFKENLFPSRGDTRLFSIGPSIAVISIL
LSYSVIPFGYRLVLADLHIGVFLWIAISSVA