; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS008991 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS008991
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Genome locationscaffold399:329067..329411
RNA-Seq ExpressionMS008991
SyntenyMS008991
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0005506 - iron ion binding (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR004497 - NADH-plastoquinone oxidoreductase, subunit I
IPR010226 - NADH-quinone oxidoreductase, chain I
IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AUF33737.1 NdhI [Fouquieria diguetii]9.4e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

YP_009523070.1 NADH-plastoquinone oxidoreductase subunit I [Solanum cerasiferum]9.4e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

YP_009752128.1 NADH dehydrogenase subunit I [Dendrosicyos socotranus]9.4e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

YP_009764792.1 NdhI [Acrocarpus fraxinifolius]9.4e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

YP_010118974.1 NADH-plastoquinone oxidoreductase subunit I [Verbena officinalis]9.4e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

TrEMBL top hitse value%identityAlignment
A0A0Y0U7Q7 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic4.5e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

A0A120L1C9 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic4.5e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

A0A346IS31 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic4.5e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

A0A411JZW9 NADH-quinone oxidoreductase subunit I4.5e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

A0A6B7FJX8 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic4.5e-6198.26Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQISL
Subjt:  STYDSHELNYNQISL

SwissProt top hitse value%identityAlignment
Q8HVJ2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.7e-6397.39Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQI+L
Subjt:  STYDSHELNYNQISL

Q8HVV7 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.7e-6397.39Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQI+L
Subjt:  STYDSHELNYNQISL

Q8HVV8 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.7e-6397.39Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQI+L
Subjt:  STYDSHELNYNQISL

Q8HVW2 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.7e-6397.39Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQI+L
Subjt:  STYDSHELNYNQISL

Q8HVW3 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic2.7e-6397.39Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYEL
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQI+L
Subjt:  STYDSHELNYNQISL

Arabidopsis top hitse value%identityAlignment
AT1G16700.1 Alpha-helical ferredoxin1.3e-1234.17Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRG-----RIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMT
        +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP     ++ + E +   +R   Y ID   CI+CG   E CP + +   
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRG-----RIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMT

Query:  EEYELSTYDSHELNYNQISL
          +E +T    EL Y++  L
Subjt:  EEYELSTYDSHELNYNQISL

AT1G79010.1 Alpha-helical ferredoxin1.3e-1234.17Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRG-----RIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMT
        +TL +     VTI YP+EK   S RFRG     R     ++CIAC++C  VCP     ++ + E +   +R   Y ID   CI+CG   E CP + +   
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRG-----RIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMT

Query:  EEYELSTYDSHELNYNQISL
          +E +T    EL Y++  L
Subjt:  EEYELSTYDSHELNYNQISL

ATCG01090.1 NADPH dehydrogenases6.3e-6394.78Show/hide
Query:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL
        ITLSH NRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLET+IRKKRLLNYSIDFGICIFCGN VEYCPTNCLSMTEEYE 
Subjt:  ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYEL

Query:  STYDSHELNYNQISL
        STYD HELNYNQI+L
Subjt:  STYDSHELNYNQISL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACTTTATCCCATGCAAATCGTTTACCTGTAACTATTCAATATCCTTACGAAAAATTAATCACATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATG
CATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATT
TCGGGATCTGTATATTTTGTGGTAACTACGTTGAATATTGTCCAACAAATTGTTTATCAATGACGGAAGAATATGAACTTTCTACTTATGATAGTCACGAATTGAATTAT
AATCAAATTTCTTTG
mRNA sequenceShow/hide mRNA sequence
ATTACTTTATCCCATGCAAATCGTTTACCTGTAACTATTCAATATCCTTACGAAAAATTAATCACATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATG
CATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATT
TCGGGATCTGTATATTTTGTGGTAACTACGTTGAATATTGTCCAACAAATTGTTTATCAATGACGGAAGAATATGAACTTTCTACTTATGATAGTCACGAATTGAATTAT
AATCAAATTTCTTTG
Protein sequenceShow/hide protein sequence
ITLSHANRLPVTIQYPYEKLITSERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNYVEYCPTNCLSMTEEYELSTYDSHELNY
NQISL