CuGenDBv2

Gene ID	MS008992
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Photosystem I iron-sulfur center
Genome location	scaffold399:331181..331342
RNA-Seq Expression	MS008992
Synteny	MS008992
Gene Ontology terms	GO:0009773 - photosynthetic electron transport in photosystem I (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0009055 - electron transfer activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

2O01_C The Structure of a plant photosystem I supercomplex at 3.4 Angstrom resolution [Pisum sativum]

3.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

RZC92604.1 hypothetical protein C5167_029528 [Papaver somniferum]

3.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP  RCKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

YP_001122848.1 photosystem I subunit VII [Phaseolus vulgaris]

3.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

YP_009138437.1 photosystem I subunit VII [Lathyrus davidii]

3.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

YP_009141471.1 photosystem I subunit VII [Lathyrus tingitanus]

4.9e-20

90.74

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVR+YLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

TrEMBL top hits

e value

%identity

Alignment

A0A218KGA0 Photosystem I iron-sulfur center

1.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

A0A410HFC6 Photosystem I iron-sulfur center

1.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

A0A6M8P9Q0 Photosystem I iron-sulfur center

1.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

D5MAH2 Photosystem I iron-sulfur center

1.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

G3ETV0 Photosystem I iron-sulfur center

1.8e-20

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

SwissProt top hits

e value

%identity

Alignment

A4GGE7 Photosystem I iron-sulfur center

4.9e-23

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

A4QJG7 Photosystem I iron-sulfur center

3.2e-22

90.74

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP   CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

A4QJQ1 Photosystem I iron-sulfur center

3.2e-22

90.74

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP   CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

P10793 Photosystem I iron-sulfur center

4.9e-23

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

P42046 Photosystem I iron-sulfur center

4.9e-23

92.59

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP G CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

Arabidopsis top hits

e value

%identity

Alignment

ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding

2.3e-23

90.74

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Query:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY
        MIP   CKAKQIASAPRTEDCVGCKRCESA P DFLSVRVYLWHETTRSMGLAY
Subjt:  MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

Sequences

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CDS sequence

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ATGATACCTTGCGGCAGATGTAAAGCTAAGCAAATAGCTTCGGCTCCAAGAACAGAAGACTGTGTTGGTTGTAAGAGATGTGAATCCGCCTATCCGATGGATTTCTTGAG
TGTTCGCGTTTATTTATGGCATGAAACAACTCGAAGCATGGGTCTAGCTTAT

mRNA sequence

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ATGATACCTTGCGGCAGATGTAAAGCTAAGCAAATAGCTTCGGCTCCAAGAACAGAAGACTGTGTTGGTTGTAAGAGATGTGAATCCGCCTATCCGATGGATTTCTTGAG
TGTTCGCGTTTATTTATGGCATGAAACAACTCGAAGCATGGGTCTAGCTTAT

Protein sequence

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MIPCGRCKAKQIASAPRTEDCVGCKRCESAYPMDFLSVRVYLWHETTRSMGLAY

MS008992 (gene) of Bitter gourd (TR) v1 genome