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MS009006 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009006
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold1036:137728..139233
RNA-Seq ExpressionMS009006
SyntenyMS009006
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600851.1 hypothetical protein SDJN03_06084, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5470.76Show/hide
Query:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRY-DCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALI
        MAN L+ S I  SDSLP    PFSG+ NT  +      S  +  SLN R RR R+R  DC ARRRVR++D E EDE+YGHNEQ+A LE YTQAAAGEALI
Subjt:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRY-DCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALI

Query:  VHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP
        VHAA+DG+ VEVLVFKGFSSCLSYATS DPSRSVLPARA I+SIDRIKGPFDPSNIEY+++GITWESFNFP
Subjt:  VHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP

KAG7031485.1 hypothetical protein SDJN02_05525, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-5571.35Show/hide
Query:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRY-DCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALI
        MAN L+ S I  SDSLP    PFSG+ NT  +      S  +  SLN R RR R+R  DC ARRRVR++D E EDE+YGHNEQ+A LE YTQAAAGEALI
Subjt:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRY-DCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALI

Query:  VHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP
        VHAA+DG+ VEVLVFKGFSSCLSYATS DPSRSVLPARA I+SIDRIKGPFDPSNIEY+E+GITWESFNFP
Subjt:  VHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP

XP_022146835.1 uncharacterized protein LOC111015943 [Momordica charantia]2.3e-8496.39Show/hide
Query:  MANLLRKSLIQCSDSLPPFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFEDEGEDEDYGHNEQVARLEYYTQAAAGEALIVHAAVD
        MANLLRKSLIQCSDSLPPFSGNPNTNTSLAGICLSSAVGQSLNLR +RLRRRYDCPARRRVRFEDEGEDEDYGHNEQVARLE YTQAA GEALIVHAAV 
Subjt:  MANLLRKSLIQCSDSLPPFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFEDEGEDEDYGHNEQVARLEYYTQAAAGEALIVHAAVD

Query:  GENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
        GENVEVL+FKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
Subjt:  GENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK

XP_022985163.1 uncharacterized protein LOC111483247 [Cucurbita maxima]3.8e-5570Show/hide
Query:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALIV
        MAN L+ S I  SDSLP    PFSG+ NT  +      S  +  SLN R RR +R  DC ARRRVR++D E EDE+YGHNEQ++ LE YTQAAAGEALIV
Subjt:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALIV

Query:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP
        HAA+DG+ VEVLVFKGFSSCLSYATS DPSRSVLPARA I+SIDRIKGPFDPSNIEY++KG+TWESFNFP
Subjt:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP

XP_038892698.1 uncharacterized protein LOC120081685 [Benincasa hispida]8.5e-5578Show/hide
Query:  PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRF-EDEGEDEDYGHNEQVARLEYYTQAAAGEALIVHAAVDGENVEVLVFKGFSSCL
        PF  NP  NTSL  I LS  + +SLN RT   R R  C ARRRVR+ ED+ EDEDYGHN+Q+A LE YTQA AGEALIVHA VDG++VEVLVFKGFSSCL
Subjt:  PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRF-EDEGEDEDYGHNEQVARLEYYTQAAAGEALIVHAAVDGENVEVLVFKGFSSCL

Query:  SYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
        SY TSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
Subjt:  SYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK

TrEMBL top hitse value%identityAlignment
A0A1S3BTQ8 uncharacterized protein LOC1034934525.2e-5067.84Show/hide
Query:  MANLLRKSLIQCSDSLP---PFSGNPNTNTSLAGICLSSAVGQSLNLRT-RRLRRRYDCPARRRVRF-EDEGEDEDYGHNEQVARLEYYTQAAAGEALIV
        MA  L K+ I  S+SL    PF  NP  NTSL  I  S  + +S N +T  R      C ARRRVR+ +DE EDEDYGHN+Q+A LE YTQAA GEALIV
Subjt:  MANLLRKSLIQCSDSLP---PFSGNPNTNTSLAGICLSSAVGQSLNLRT-RRLRRRYDCPARRRVRF-EDEGEDEDYGHNEQVARLEYYTQAAAGEALIV

Query:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
        HA VDGE+VEVLVFKGFSSCLSY TSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y+EKGITW SFNFPK
Subjt:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK

A0A5A7UTE4 Uncharacterized protein5.2e-5067.84Show/hide
Query:  MANLLRKSLIQCSDSLP---PFSGNPNTNTSLAGICLSSAVGQSLNLRT-RRLRRRYDCPARRRVRF-EDEGEDEDYGHNEQVARLEYYTQAAAGEALIV
        MA  L K+ I  S+SL    PF  NP  NTSL  I  S  + +S N +T  R      C ARRRVR+ +DE EDEDYGHN+Q+A LE YTQAA GEALIV
Subjt:  MANLLRKSLIQCSDSLP---PFSGNPNTNTSLAGICLSSAVGQSLNLRT-RRLRRRYDCPARRRVRF-EDEGEDEDYGHNEQVARLEYYTQAAAGEALIV

Query:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
        HA VDGE+VEVLVFKGFSSCLSY TSPDPSRSV+P RA IKSIDRIKGPFDPSNI+Y+EKGITW SFNFPK
Subjt:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK

A0A6J1CYG3 uncharacterized protein LOC1110159431.1e-8496.39Show/hide
Query:  MANLLRKSLIQCSDSLPPFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFEDEGEDEDYGHNEQVARLEYYTQAAAGEALIVHAAVD
        MANLLRKSLIQCSDSLPPFSGNPNTNTSLAGICLSSAVGQSLNLR +RLRRRYDCPARRRVRFEDEGEDEDYGHNEQVARLE YTQAA GEALIVHAAV 
Subjt:  MANLLRKSLIQCSDSLPPFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFEDEGEDEDYGHNEQVARLEYYTQAAAGEALIVHAAVD

Query:  GENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
        GENVEVL+FKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK
Subjt:  GENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK

A0A6J1FWQ3 uncharacterized protein LOC1114476341.0e-5369.59Show/hide
Query:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRY-DCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALI
        MAN L+ S I  SDSLP    PFSG+ NT  +      S  +  SLN R RR  +R  DC ARRRVR++D E EDE+YGHNEQ+A LE YTQAAAGEALI
Subjt:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRY-DCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALI

Query:  VHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP
        VHAA+DG+ VEVLVFKGFSSCLS+ATS DPSRSVLPARA I+SIDRIKGPFDPSNIEY+++GITWESFNFP
Subjt:  VHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP

A0A6J1JCS8 uncharacterized protein LOC1114832471.8e-5570Show/hide
Query:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALIV
        MAN L+ S I  SDSLP    PFSG+ NT  +      S  +  SLN R RR +R  DC ARRRVR++D E EDE+YGHNEQ++ LE YTQAAAGEALIV
Subjt:  MANLLRKSLIQCSDSLP----PFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFED-EGEDEDYGHNEQVARLEYYTQAAAGEALIV

Query:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP
        HAA+DG+ VEVLVFKGFSSCLSYATS DPSRSVLPARA I+SIDRIKGPFDPSNIEY++KG+TWESFNFP
Subjt:  HAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01755.1 unknown protein1.1e-3158.47Show/hide
Query:  RRLRRRYDCPARRRVRFEDEGEDED--YGHNEQVARLEYYTQAAAGEALIVHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGP
        RR  + + C ARRRVR E  GEDED  YG+NE++A LE Y+Q+   EALIV A VD E VEV++FKG SSCLS  T+ DP+RSVLP RAVI  IDR++GP
Subjt:  RRLRRRYDCPARRRVRFEDEGEDED--YGHNEQVARLEYYTQAAAGEALIVHAAVDGENVEVLVFKGFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGP

Query:  FDPSNIEYLEKGITWESF
        FDPS I Y+++ I++++F
Subjt:  FDPSNIEYLEKGITWESF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATCTCCTCCGAAAATCCCTAATCCAGTGCTCCGATTCTCTCCCGCCATTTTCCGGCAATCCAAACACAAACACGTCTCTCGCCGGAATTTGTCTCTCTTCCGC
CGTCGGCCAATCTCTGAATCTGAGAACTCGGCGCCTCCGCCGCCGTTACGATTGCCCGGCGAGGCGCAGAGTTCGATTCGAAGACGAGGGCGAAGACGAGGATTACGGCC
ACAACGAACAGGTGGCGCGGCTGGAATATTACACTCAGGCCGCCGCCGGCGAGGCGCTCATCGTTCACGCGGCGGTCGACGGCGAGAATGTTGAAGTGCTCGTCTTCAAG
GGATTCTCGTCTTGCTTGAGCTACGCAACTTCGCCGGATCCATCGAGAAGCGTTCTTCCGGCGAGGGCGGTGATAAAATCCATAGATAGAATCAAAGGCCCCTTTGATCC
TTCCAATATTGAATACCTTGAGAAGGGCATCACTTGGGAATCCTTCAACTTCCCCAAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATCTCCTCCGAAAATCCCTAATCCAGTGCTCCGATTCTCTCCCGCCATTTTCCGGCAATCCAAACACAAACACGTCTCTCGCCGGAATTTGTCTCTCTTCCGC
CGTCGGCCAATCTCTGAATCTGAGAACTCGGCGCCTCCGCCGCCGTTACGATTGCCCGGCGAGGCGCAGAGTTCGATTCGAAGACGAGGGCGAAGACGAGGATTACGGCC
ACAACGAACAGGTGGCGCGGCTGGAATATTACACTCAGGCCGCCGCCGGCGAGGCGCTCATCGTTCACGCGGCGGTCGACGGCGAGAATGTTGAAGTGCTCGTCTTCAAG
GGATTCTCGTCTTGCTTGAGCTACGCAACTTCGCCGGATCCATCGAGAAGCGTTCTTCCGGCGAGGGCGGTGATAAAATCCATAGATAGAATCAAAGGCCCCTTTGATCC
TTCCAATATTGAATACCTTGAGAAGGGCATCACTTGGGAATCCTTCAACTTCCCCAAA
Protein sequenceShow/hide protein sequence
MANLLRKSLIQCSDSLPPFSGNPNTNTSLAGICLSSAVGQSLNLRTRRLRRRYDCPARRRVRFEDEGEDEDYGHNEQVARLEYYTQAAAGEALIVHAAVDGENVEVLVFK
GFSSCLSYATSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNFPK