; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009009 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009009
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionS-protein homolog
Genome locationscaffold1036:162958..163380
RNA-Seq ExpressionMS009009
SyntenyMS009009
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600848.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2447.71Show/hide
Query:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK
        +F V IRNG+  ++L SHC S +DD+GV  +Y + E  WSF+ N+ G+T F CKL+WA G  EF+AF  D +F  ++C N  CVW AKQD +Y  ++ G+
Subjt:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK

Query:  LDFKFYWKL
        L FK +W+L
Subjt:  LDFKFYWKL

KAG6600849.1 S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3453.45Show/hide
Query:  RSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIY
        RSL  +P+F VEIRNG+  ++L SHC+S +DD+G+H L+ + +  WSF+ NFWG T F C+L+W  G +EF+AF+VD+ FFD YC+NFRC+W+AKQD IY
Subjt:  RSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIY

Query:  GVNRGGKLDFKFYWKL
         +N+ G+  F   WKL
Subjt:  GVNRGGKLDFKFYWKL

KAG7031483.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3650Show/hide
Query:  QLVLFFLGLLLISSPHPTDA-------RHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQE
        +LVL +LGLLL+ S   T A       +  RSL  +P+F VEIRNG+  ++L SHC+S +DD+G+H L+ + +  WSF+ NFWG T F C+L+W  G +E
Subjt:  QLVLFFLGLLLISSPHPTDA-------RHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQE

Query:  FNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYWKL
        F+AF+VD+ FFD YC+NFRC+W+AKQD IY +N+ G+  F   WKL
Subjt:  FNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYWKL

XP_023546843.1 S-protein homolog 1-like [Cucurbita pepo subsp. pepo]3.0e-2446.79Show/hide
Query:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK
        +F V IRNG+  ++L SHC S +DD+GVH +Y + E  WSF+ N+ G+T F CKL+WA G  EF+AF  D +F   +C +  CVW AKQD +Y  ++ G+
Subjt:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK

Query:  LDFKFYWKL
        L FK +W++
Subjt:  LDFKFYWKL

XP_023546939.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]1.6e-3352.59Show/hide
Query:  RSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIY
        RSL  +P+F VEIRNG+  ++L SHC+S +DD+G+H L+ + +  WSF+ N WG T F C+L+W  G +EF+AF+VD+ FFD YC+NFRC+W+AKQD IY
Subjt:  RSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIY

Query:  GVNRGGKLDFKFYWKL
         +N+ G+  F   WKL
Subjt:  GVNRGGKLDFKFYWKL

TrEMBL top hitse value%identityAlignment
A0A0A0KL79 S-protein homolog2.1e-2341.27Show/hide
Query:  SPHPTDARHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRC
        SP P  +     +    RFTVEI N +   +L SHC+S +DD+G+H L+ +++  WSFK N+  TT F C+L+W  G  EF++F    DF  NYC N  C
Subjt:  SPHPTDARHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRC

Query:  VWVAKQDAIYGVNRGGKLDFKFYWKL
        +W A+QD +Y  N  G+  F  YW++
Subjt:  VWVAKQDAIYGVNRGGKLDFKFYWKL

A0A0A0KSN2 S-protein homolog8.7e-2235.51Show/hide
Query:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQ
        + LF + L  +S    + A    S+ ++  + +EI N +  ++L SHC+S ++D+G+H L+  +   WSF+ N + TTKFRC L+W  G  EF++F  + 
Subjt:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQ

Query:  DFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYWKL
        +F +N+C N  C W A+QD +Y  N  G+  F+ YW +
Subjt:  DFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYWKL

A0A1S3BUQ9 S-protein homolog6.7e-2243.12Show/hide
Query:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK
        +F + I N +  ++L SHC+S +DD+G   LY N E  WSF+ N+ GTT F CKL+W  G  EF+AF  D  F  N+CA   C W A+QD +Y  N+ G+
Subjt:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK

Query:  LDFKFYWKL
        + F   W++
Subjt:  LDFKFYWKL

A0A6J1F5H5 S-protein homolog1.9e-2144.55Show/hide
Query:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQD-FFDNYCANFRCVWVAKQDAIYGVNRGG
        RFTVEI N +   +L +HC S +DD+G+H L+ ++E  WSF  N+ GTT+F C+L+W  G  EF+AF+ + D    +YCAN  C+W A+QD +Y  N+  
Subjt:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQD-FFDNYCANFRCVWVAKQDAIYGVNRGG

Query:  KLDFKFYWKL
         L F  YW +
Subjt:  KLDFKFYWKL

A0A6J1FMU2 S-protein homolog4.2e-2446.79Show/hide
Query:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK
        +F V IRNG+  ++L SHC S +DD+GV  +Y + E  WSF+ N+ G+T F CKL+WA G  EF+AF  D +F  ++C +  CVW AKQD +Y  ++ G+
Subjt:  RFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGK

Query:  LDFKFYWKL
        L FK +W+L
Subjt:  LDFKFYWKL

SwissProt top hitse value%identityAlignment
O23020 S-protein homolog 52.1e-0934.29Show/hide
Query:  VEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDF
        V + N + G  LT HC S +DD+G+H +   QE+H+ F+ N W +T F C   W    + F+ +   +D     C +  C W  K D   G  R GK   
Subjt:  VEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDF

Query:  KFYWK
         F WK
Subjt:  KFYWK

Q9LW22 S-protein homolog 213.8e-0627.08Show/hide
Query:  SMQLVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGM---VGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFN
        ++ + LF +GL +IS  +              + T+ ++N +     ++L  HC S  +DIGV  L   +   +SFK NFWGTT+F C L      + + 
Subjt:  SMQLVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGM---VGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFN

Query:  AF--YVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYW
            Y     F    +++   W+A+ D IY         +K YW
Subjt:  AF--YVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYW

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family1.5e-1034.29Show/hide
Query:  VEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDF
        V + N + G  LT HC S +DD+G+H +   QE+H+ F+ N W +T F C   W    + F+ +   +D     C +  C W  K D   G  R GK   
Subjt:  VEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDF

Query:  KFYWK
         F WK
Subjt:  KFYWK

AT1G26796.1 Plant self-incompatibility protein S1 family1.1e-0828.57Show/hide
Query:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQ
        L++FFL +   SS     +     L   P+  + I   +    L  HC +  DD+GV +L      H+ F+ N   TTK+ C  +W   T  F+ F  D+
Subjt:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQ

Query:  DFFDN----YCANFRCVWVAKQDAIYGVNRGGKLDFKFYW
        D  DN    Y     C+W   + A     R G     F W
Subjt:  DFFDN----YCANFRCVWVAKQDAIYGVNRGGKLDFKFYW

AT3G26880.1 Plant self-incompatibility protein S1 family2.7e-0727.08Show/hide
Query:  SMQLVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGM---VGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFN
        ++ + LF +GL +IS  +              + T+ ++N +     ++L  HC S  +DIGV  L   +   +SFK NFWGTT+F C L      + + 
Subjt:  SMQLVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGM---VGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFN

Query:  AF--YVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYW
            Y     F    +++   W+A+ D IY         +K YW
Subjt:  AF--YVDQDFFDNYCANFRCVWVAKQDAIYGVNRGGKLDFKFYW

AT3G54925.1 Plant self-incompatibility protein S1 family3.2e-0833.33Show/hide
Query:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVG-HVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYV
        L+LF   L   ++P  + +        + +  V I N +    +L  HC SSEDD G+  +  N    +SF  NFW TTKFRC   W  G   +  FY+
Subjt:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVG-HVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYV

AT3G55252.1 Plant self-incompatibility protein S1 family3.2e-0830.3Show/hide
Query:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVG-HVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVD
        L+LF   L+L  +P          L  +    V IRN +    +L  HC SSEDD G+  +  N    + F  NF+ TTKFRC   W  G   +  FY+ 
Subjt:  LVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVG-HVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVD

Query:  QDFFDNYCAN-----FRCVWVAKQDAIYGVNR
        +   D+           C+W   QD +  + R
Subjt:  QDFFDNYCAN-----FRCVWVAKQDAIYGVNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCATGCAACTTGTACTATTCTTTCTAGGCCTCTTACTGATCTCGTCGCCCCATCCAACGGACGCAAGACATGTAAGATCTCTGTTCAAAATGCCCAGATTTACGGTCGA
GATTCGCAACGGGATGGTCGGGCACGTGCTGACCAGCCACTGCTGGTCGTCGGAGGACGACATAGGGGTGCATGCGCTGTACGACAACCAGGAACATCACTGGTCTTTCA
AGAAGAATTTTTGGGGGACAACAAAATTCCGCTGTAAATTGGATTGGGCAGAAGGAACACAGGAGTTCAATGCCTTTTATGTTGATCAAGATTTCTTCGATAACTACTGT
GCCAACTTTAGGTGTGTTTGGGTGGCCAAACAAGATGCCATTTATGGGGTCAATCGAGGTGGTAAACTGGATTTTAAGTTCTATTGGAAATTG
mRNA sequenceShow/hide mRNA sequence
AGCATGCAACTTGTACTATTCTTTCTAGGCCTCTTACTGATCTCGTCGCCCCATCCAACGGACGCAAGACATGTAAGATCTCTGTTCAAAATGCCCAGATTTACGGTCGA
GATTCGCAACGGGATGGTCGGGCACGTGCTGACCAGCCACTGCTGGTCGTCGGAGGACGACATAGGGGTGCATGCGCTGTACGACAACCAGGAACATCACTGGTCTTTCA
AGAAGAATTTTTGGGGGACAACAAAATTCCGCTGTAAATTGGATTGGGCAGAAGGAACACAGGAGTTCAATGCCTTTTATGTTGATCAAGATTTCTTCGATAACTACTGT
GCCAACTTTAGGTGTGTTTGGGTGGCCAAACAAGATGCCATTTATGGGGTCAATCGAGGTGGTAAACTGGATTTTAAGTTCTATTGGAAATTG
Protein sequenceShow/hide protein sequence
SMQLVLFFLGLLLISSPHPTDARHVRSLFKMPRFTVEIRNGMVGHVLTSHCWSSEDDIGVHALYDNQEHHWSFKKNFWGTTKFRCKLDWAEGTQEFNAFYVDQDFFDNYC
ANFRCVWVAKQDAIYGVNRGGKLDFKFYWKL