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MS009117 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009117
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold220:16010..17216
RNA-Seq ExpressionMS009117
SyntenyMS009117
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138679.1 uncharacterized protein LOC101205088 [Cucumis sativus]2.3e-4574.22Show/hide
Query:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI
        K  E  PKSP P  WFSFLPKF FRLP PV   KKPP  VVDE +     A++DA+KPEFVRFPKA++ VASVEAEAD+SGKTSNPAV+WQVYALGGFLI
Subjt:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI

Query:  LSWAWARWKERRPQRRPNDDEDDEDSSN
        LSWAWARWKERRPQRR NDD++DEDSS+
Subjt:  LSWAWARWKERRPQRRPNDDEDDEDSSN

XP_008456569.1 PREDICTED: uncharacterized protein LOC103496485 [Cucumis melo]1.8e-4272.22Show/hide
Query:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI
        K  E  PKSP P  WFSFLPKF FRLP PV   KK P  VVDE +     A++DA+KPEFVRFPKA++ VASVEAEAD+SGKTSNPAV+WQVYALGGFLI
Subjt:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI

Query:  LSWAWARWKERRPQRRPNDDEDDEDS
        LSWAWARWKERRPQRR NDD++D+ S
Subjt:  LSWAWARWKERRPQRRPNDDEDDEDS

XP_022133498.1 uncharacterized protein LOC111006063 [Momordica charantia]5.2e-6699.22Show/hide
Query:  MSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLIL
        MSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLIL
Subjt:  MSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLIL

Query:  SWAWARWKERRPQRRPNDDEDDEDSSNI
        SWAWARWKERRPQRRPNDDEDDED SNI
Subjt:  SWAWARWKERRPQRRPNDDEDDEDSSNI

XP_023550789.1 uncharacterized protein LOC111808822 isoform X3 [Cucurbita pepo subsp. pepo]1.8e-4269.47Show/hide
Query:  PNITKMSE-ETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYAL
        P +  M E E+PK   P  WFSFLPKF  RLPLP+   KKPPA V+DEG   +    DDA+KPEFVRFPKA++AV SVE EAD+SGKTSNPAVIWQVYAL
Subjt:  PNITKMSE-ETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYAL

Query:  GGFLILSWAWARWKERRPQRRPNDDEDDEDS
        GGFLILSWAWARWKERRP+RR +DD+++EDS
Subjt:  GGFLILSWAWARWKERRPQRRPNDDEDDEDS

XP_038886165.1 uncharacterized protein LOC120076415 [Benincasa hispida]1.8e-5078.29Show/hide
Query:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI
        K  E++PKSP P  WFSFLPKF FRLP P+   KKPPA VVDEG+     A+DDA+KPEFVRFPKA++ VASVEAEAD+SGKTSNPAVIWQVYALGGFLI
Subjt:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI

Query:  LSWAWARWKERRPQRRPNDDEDDEDSSNI
        LSWAWARWKERRPQRR NDDE+DEDSSNI
Subjt:  LSWAWARWKERRPQRRPNDDEDDEDSSNI

TrEMBL top hitse value%identityAlignment
A0A0A0LSR5 Uncharacterized protein1.1e-4574.22Show/hide
Query:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI
        K  E  PKSP P  WFSFLPKF FRLP PV   KKPP  VVDE +     A++DA+KPEFVRFPKA++ VASVEAEAD+SGKTSNPAV+WQVYALGGFLI
Subjt:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI

Query:  LSWAWARWKERRPQRRPNDDEDDEDSSN
        LSWAWARWKERRPQRR NDD++DEDSS+
Subjt:  LSWAWARWKERRPQRRPNDDEDDEDSSN

A0A1S3C3J3 uncharacterized protein LOC1034964858.7e-4372.22Show/hide
Query:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI
        K  E  PKSP P  WFSFLPKF FRLP PV   KK P  VVDE +     A++DA+KPEFVRFPKA++ VASVEAEAD+SGKTSNPAV+WQVYALGGFLI
Subjt:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI

Query:  LSWAWARWKERRPQRRPNDDEDDEDS
        LSWAWARWKERRPQRR NDD++D+ S
Subjt:  LSWAWARWKERRPQRRPNDDEDDEDS

A0A5D3CKR2 Uncharacterized protein8.7e-4372.22Show/hide
Query:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI
        K  E  PKSP P  WFSFLPKF FRLP PV   KK P  VVDE +     A++DA+KPEFVRFPKA++ VASVEAEAD+SGKTSNPAV+WQVYALGGFLI
Subjt:  KMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLI

Query:  LSWAWARWKERRPQRRPNDDEDDEDS
        LSWAWARWKERRPQRR NDD++D+ S
Subjt:  LSWAWARWKERRPQRRPNDDEDDEDS

A0A6J1BZA3 uncharacterized protein LOC1110060632.5e-6699.22Show/hide
Query:  MSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLIL
        MSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLIL
Subjt:  MSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLIL

Query:  SWAWARWKERRPQRRPNDDEDDEDSSNI
        SWAWARWKERRPQRRPNDDEDDED SNI
Subjt:  SWAWARWKERRPQRRPNDDEDDEDSSNI

A0A6J1JVP7 uncharacterized protein LOC1114892982.5e-4271.54Show/hide
Query:  EETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLILSW
        EE+PK   P  WFSFLPKF  RLPLP+   KKPPA V+DEG   +    +DA+KPEFVRFPKA++AV SVE EAD+SGKTSNPAVIWQVYALGGFLILSW
Subjt:  EETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLILSW

Query:  AWARWKERRPQRRPNDDEDDEDS
        AWARWKERRP+RR +DD+++EDS
Subjt:  AWARWKERRPQRRPNDDEDDEDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52230.1 unknown protein2.7e-1239.05Show/hide
Query:  KPPAAVVDEGQNQEALANDDARKP-EFVRFP-KADVAVASVEAEAD-ISGKTSNPAVIWQVYALGGFLILSWAWARWKERRPQR----------RPNDDE
        KPP A +D    +     +  +   E V FP     +   ++ EA+  SG+TSN  ++WQVYALGGFL+L WAWARW ER  +           + +DDE
Subjt:  KPPAAVVDEGQNQEALANDDARKP-EFVRFP-KADVAVASVEAEAD-ISGKTSNPAVIWQVYALGGFLILSWAWARWKERRPQR----------RPNDDE

Query:  DDEDS
        DD+ S
Subjt:  DDEDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTCTCTCTTCCCCAACATCACAAAAATGTCAGAGGAGACCCCAAAATCCCCCCTCCCCCTCAACTGGTTCTCCTTTCTTCCCAAGTTCCAGTTCCGATTGCCTCTTCC
GGTCTTCGACGCCAAGAAACCGCCGGCTGCGGTGGTCGACGAAGGCCAGAACCAAGAGGCCTTGGCCAACGACGACGCTCGGAAGCCGGAGTTTGTGAGGTTTCCTAAGG
CGGACGTGGCCGTCGCTTCGGTGGAGGCTGAAGCCGATATCTCCGGCAAGACTTCCAATCCCGCGGTTATCTGGCAGGTATATGCTCTGGGAGGGTTTCTAATTTTGAGT
TGGGCATGGGCAAGATGGAAGGAGAGAAGGCCACAAAGACGTCCAAATGACGATGAGGACGATGAAGATTCCAGCAATATA
mRNA sequenceShow/hide mRNA sequence
TTTTCTCTCTTCCCCAACATCACAAAAATGTCAGAGGAGACCCCAAAATCCCCCCTCCCCCTCAACTGGTTCTCCTTTCTTCCCAAGTTCCAGTTCCGATTGCCTCTTCC
GGTCTTCGACGCCAAGAAACCGCCGGCTGCGGTGGTCGACGAAGGCCAGAACCAAGAGGCCTTGGCCAACGACGACGCTCGGAAGCCGGAGTTTGTGAGGTTTCCTAAGG
CGGACGTGGCCGTCGCTTCGGTGGAGGCTGAAGCCGATATCTCCGGCAAGACTTCCAATCCCGCGGTTATCTGGCAGGTATATGCTCTGGGAGGGTTTCTAATTTTGAGT
TGGGCATGGGCAAGATGGAAGGAGAGAAGGCCACAAAGACGTCCAAATGACGATGAGGACGATGAAGATTCCAGCAATATA
Protein sequenceShow/hide protein sequence
FSLFPNITKMSEETPKSPLPLNWFSFLPKFQFRLPLPVFDAKKPPAAVVDEGQNQEALANDDARKPEFVRFPKADVAVASVEAEADISGKTSNPAVIWQVYALGGFLILS
WAWARWKERRPQRRPNDDEDDEDSSNI