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MS009121 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009121
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome locationscaffold220:44567..44821
RNA-Seq ExpressionMS009121
SyntenyMS009121
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function)
GO:0048038 - quinone binding (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR018086 - NADH:ubiquinone oxidoreductase, subunit 1, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QJD26700.1 NdhA [Trichosanthes rosthornii]4.8e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

QJS52316.1 NADH-plastoquinone oxidoreductase subunit 1 [Indofevillea khasiana]4.8e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

QZL38650.1 NADH dehydrogenase subunit A [Citrullus naudinianus]4.8e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

YP_009751534.1 NADH dehydrogenase subunit A [Thladiantha dubia]4.8e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

YP_009751792.1 NADH dehydrogenase subunit A [Herpetospermum pedunculosum]4.8e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

TrEMBL top hitse value%identityAlignment
A0A1P8LE62 NADH-quinone oxidoreductase subunit H2.3e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

A0A2Z2CG87 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.3e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

A0A346QNK2 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.3e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

A0A514YKY7 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.3e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

A0A6H0ES46 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic2.3e-3895.29Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYIFGY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

SwissProt top hitse value%identityAlignment
A0A390 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic3.8e-3892.68Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF
        WNL RQP GF+IFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGW++SIPYIF
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF

Q09WW3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic3.8e-3891.46Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF
        WNL RQP GF+IFLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYL+LLVSSLFVT+LYLGGW+ISIPYIF
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF

Q0ZIW3 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic1.3e-3892.68Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF
        WNL RQP GF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWD+SIPYIF
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic3.1e-4094.12Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ
        WNL RQP GFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYL+LLVSSLFVTVLYLGGWDISIPYI GY+
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ

Q8S8U5 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic6.6e-3890.24Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF
        WNL RQP GF++FLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFY+ASYL+LLVSSLFVTVLYLGGW++SIPYIF
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIF

Arabidopsis top hitse value%identityAlignment
ATCG01100.1 NADH dehydrogenase family protein1.0e-3891.36Show/hide
Query:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYI
        WNL RQP GF+IFLISSLAECERLPFDLPEAEEEL+AGYQTEYSGIKFGLFYVASYL+LL+SSLFVTVLYLGGW+ISIPYI
Subjt:  WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYI

ATMG00516.1 NADH dehydrogenase 1C6.3e-1251.56Show/hide
Query:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGW
        V+FLIS LAE  R PFDLPEAE E VAGY  EYS +   LF++  Y ++++ S   T+ + GGW
Subjt:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGW

ATMG01120.1 NADH dehydrogenase 1B6.3e-1251.56Show/hide
Query:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGW
        V+FLIS LAE  R PFDLPEAE E VAGY  EYS +   LF++  Y ++++ S   T+ + GGW
Subjt:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGW

ATMG01275.1 NADH dehydrogenase 1A6.3e-1251.56Show/hide
Query:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGW
        V+FLIS LAE  R PFDLPEAE E VAGY  EYS +   LF++  Y ++++ S   T+ + GGW
Subjt:  VIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAATTTGTGTCGTCAACCTACAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTGGC
GGGTTATCAAACCGAGTATTCGGGTATCAAATTTGGTTTATTTTATGTTGCTTCCTATCTAGATCTATTAGTTTCTTCATTATTTGTAACAGTTCTTTACTTGGGTGGTT
GGGATATCTCTATTCCATACATATTCGGTTATCAA
mRNA sequenceShow/hide mRNA sequence
TGGAATTTGTGTCGTCAACCTACAGGGTTTGTTATTTTTCTAATTTCTTCCTTAGCAGAATGCGAGAGATTACCTTTTGATTTACCAGAAGCAGAAGAAGAATTAGTGGC
GGGTTATCAAACCGAGTATTCGGGTATCAAATTTGGTTTATTTTATGTTGCTTCCTATCTAGATCTATTAGTTTCTTCATTATTTGTAACAGTTCTTTACTTGGGTGGTT
GGGATATCTCTATTCCATACATATTCGGTTATCAA
Protein sequenceShow/hide protein sequence
WNLCRQPTGFVIFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLDLLVSSLFVTVLYLGGWDISIPYIFGYQ