; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009125 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009125
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRRM domain-containing protein
Genome locationscaffold220:63117..64407
RNA-Seq ExpressionMS009125
SyntenyMS009125
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602267.1 MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein, partial [Cucurbita argyrosperma subsp. sororia]9.6e-9691.88Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATSL+S KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+HNKERTL EHRKLVERILKR+QARQKRIRAAGI+YECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

TYK11746.1 putative RNA-binding protein [Cucumis melo var. makuwa]8.7e-9790.1Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVRIY
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGI+YECPEIVR +
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVRIY

Query:  FF
         F
Subjt:  FF

XP_022134394.1 uncharacterized RNA-binding protein C1827.05c [Momordica charantia]2.3e-105100Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]1.5e-9692.89Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+HNKERTL EHRKLVERILKR+QARQKRIRAAGI+YECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]6.7e-9791.88Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATS LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYR+KPL+  ELERKQHNKERTL EH+KLVERILKRDQAR+KRIRAAGI+YECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

TrEMBL top hitse value%identityAlignment
A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c6.1e-9691.37Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGI+YECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

A0A5D3CMU5 Putative RNA-binding protein4.2e-9790.1Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL KAT L S+KKESADFLPL GGPGRKLP QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGY+EFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVRIY
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERKQHNKERTL EH+KLV+RILKRDQARQKRIRAAGI+YECPEIVR +
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVRIY

Query:  FF
         F
Subjt:  FF

A0A6J1BYN0 uncharacterized RNA-binding protein C1827.05c1.1e-105100Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like7.2e-9792.89Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKLNKATSLLS KKESADFLPL GGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEF+
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYR+ PLN  ELERK+HNKERTL EHRKLVERILKR+QARQKRIRAAGI+YECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like3.2e-9791.88Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE
        MGAKAKKAMKKKL+KATS LS+KKESADFLPL GGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKSRHFGYIEFE
Subjt:  MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYR+KPL+  ELERKQHNKERTL EH+KLVERILKRDQAR+KRIRAAGI+YECPEIV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIV

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c3.3e-3041.29Show/hide
Query:  RKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLW
        +K+   K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RN+KTG S+H+ +IEFES +VA +VA++MHNYLLY  +L+  +IP + VH  ++
Subjt:  RKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLW

Query:  KGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYE
        KG +  +K +    + R QH K  +  +  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein4.0e-2836.65Show/hide
Query:  ATSLLS-EKKESADFLPLVGGPGRKLPAQKPLEN-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH
        A  LLS   +E A F   V    R+   Q+  +  T  V+Y+G +P   +E ++  +F QFG V R R++R+KKTG S+ +G++EFES +VAKI A++M+
Subjt:  ATSLLS-EKKESADFLPLVGGPGRKLPAQKPLEN-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH

Query:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVRIYFFSE
        NYL  E +LK H IPPE VH +L++ ++  +K  +   +  K++N+ R+L +  ++ ER  K+++  +KR+   GI+Y  P +V++   +E
Subjt:  NYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVRIYFFSE

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like1.4e-2843.36Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE
        V+YIG IP   +E ++  +F QFG V RLR++R+KKTG S+ + Y+EFE  EVAKIVAD+M+NYL  E +LK   +PPE VHP+L+ G   +++      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE

Query:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP
        + R  +NK R+ +E +K+ +R+L ++   +KR+   GI+Y+ P
Subjt:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.0e-2739.04Show/hide
Query:  MKKKLNKATSLLS-EKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKI
        M ++L ++  LLS + K   DF   V    RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R+KKTG S+ + Y+E+E  EVAKI
Subjt:  MKKKLNKATSLLS-EKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKI

Query:  VADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP
        VAD+M+NYL  E +LK   + PE VHP+L+ G N R++      + R  +N +R   E +K+ +R++ ++   +KR+   GI+Y+ P
Subjt:  VADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein8.1e-2945.45Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE
        VLY+G +P G FE +++ +F QFGKV RLR++R+KKTG S+ +G++EFE  EVAKIVA++M+NYL+ E I+K H+IPPE VH KL+ G    +K      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFE

Query:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP
        + R  +NK  T  + +K+  ++L ++   +KR+ A GI+Y+ P
Subjt:  LERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECP

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-0631.96Show/hide
Query:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL
        P +   G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG S+ FG+I ++S   A+   ++M+   L    LKV L
Subjt:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-0631.96Show/hide
Query:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL
        P +   G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG S+ FG+I ++S   A+   ++M+   L    LKV L
Subjt:  PLVGGPGRKLPAQKPLENTATV-LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHL

AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-0637.1Show/hide
Query:  LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHN
        L+IG I     E+ ++ +F  FG+V    I +++ TG++R FG++ F  P VA+IV    HN
Subjt:  LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMHN

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-0628.18Show/hide
Query:  PAQKPLENTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHI
        P ++ +E+ + +  L+IG I     E+ ++ +FG++G +    I R++ TG++R FG+I F  P VA+ V    H                   +L  H 
Subjt:  PAQKPLENTATV--LYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVADSMH-----------------NYLLYEHI

Query:  LKVHLIPPEH
          +HLI P H
Subjt:  LKVHLIPPEH

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-6862.14Show/hide
Query:  MGAKAKKAMKKKLNKATSLLSEK--------KESADFLPLVGGPGRKLP-AQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKAKKA+KK + K  +  S          K SADFLPL GGP RK P    PL+N ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKAKKAMKKKLNKATSLLSEK--------KESADFLPLVGGPGRKLP-AQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  RHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEY
        +HFG+I+FE PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF   +KP++  ++ER+Q NKERTL EHRK++++I+K+DQ R+KRI AAGIEY
Subjt:  RHFGYIEFESPEVAKIVADSMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEY

Query:  ECPEIV
        ECPE+V
Subjt:  ECPEIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTTTATTGTCTGAGAAGAAGGAATCTGCCGATTTCTTGCCGTTGGTTGGGGGCCCTGG
CCGCAAGTTACCGGCACAAAAGCCACTGGAAAATACTGCTACTGTTTTGTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGT
TTGGTAAAGTCAAGAGATTAAGAATTGCACGAAATAAAAAGACTGGGAAGTCAAGGCACTTTGGCTACATTGAATTTGAATCTCCGGAGGTGGCAAAAATTGTAGCTGAT
TCTATGCATAACTATCTGTTGTATGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAACATGTTCATCCAAAGCTATGGAAAGGTTTTAACTATCGCTACAAGCCTTT
AAATTTGTTCGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGAGTGAACACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGGCAGAAGAGGA
TAAGAGCTGCTGGGATTGAATACGAGTGTCCAGAAATTGTAAGAATTTATTTCTTTTCTGAAAGTTTATTAAATTCTAGC
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTGAATAAGGCTACTTCTTTATTGTCTGAGAAGAAGGAATCTGCCGATTTCTTGCCGTTGGTTGGGGGCCCTGG
CCGCAAGTTACCGGCACAAAAGCCACTGGAAAATACTGCTACTGTTTTGTACATTGGTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTTGGACAGT
TTGGTAAAGTCAAGAGATTAAGAATTGCACGAAATAAAAAGACTGGGAAGTCAAGGCACTTTGGCTACATTGAATTTGAATCTCCGGAGGTGGCAAAAATTGTAGCTGAT
TCTATGCATAACTATCTGTTGTATGAACACATTCTGAAAGTCCATCTAATTCCTCCCGAACATGTTCATCCAAAGCTATGGAAAGGTTTTAACTATCGCTACAAGCCTTT
AAATTTGTTCGAACTTGAGCGTAAACAGCATAACAAGGAAAGGACATTGAGTGAACACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGGATCAGGCTAGGCAGAAGAGGA
TAAGAGCTGCTGGGATTGAATACGAGTGTCCAGAAATTGTAAGAATTTATTTCTTTTCTGAAAGTTTATTAAATTCTAGC
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLNKATSLLSEKKESADFLPLVGGPGRKLPAQKPLENTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSRHFGYIEFESPEVAKIVAD
SMHNYLLYEHILKVHLIPPEHVHPKLWKGFNYRYKPLNLFELERKQHNKERTLSEHRKLVERILKRDQARQKRIRAAGIEYECPEIVRIYFFSESLLNSS