; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009127 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009127
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING-H2 finger protein ATL38-like
Genome locationscaffold220:74522..77923
RNA-Seq ExpressionMS009127
SyntenyMS009127
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032948.1 RING-H2 finger protein ATL7 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-9681.61Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANGADSTENAS
        RILPYCGH FHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VCA+PC GFPL D EN+GLEPIQEN  +     AD  ENAS
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANGADSTENAS

Query:  SFVEGNSISKGSRNKN-VETSNA
        SF EGN  SKGSRNKN V  SNA
Subjt:  SFVEGNSISKGSRNKN-VETSNA

XP_022134427.1 RING-H2 finger protein ATL38-like [Momordica charantia]4.8e-12299.1Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANGADSTENAS
        RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVC HPCDGFPLRDLENSGLEPIQENHCS GANGADSTENAS
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANGADSTENAS

Query:  SFVEGNSISKGSRNKNVETSNA
        SFVEGNSISKGSRNKNVETSNA
Subjt:  SFVEGNSISKGSRNKNVETSNA

XP_022960827.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]2.0e-9682.59Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADY+ ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VCA+PC GFPL D EN+GLEPIQEN     ANG AD  ENA
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA

Query:  SSFVEGNSISKGSRNKN-VETSNA
        SSF EGN  SKGSRNKN V  SNA
Subjt:  SSFVEGNSISKGSRNKN-VETSNA

XP_022990455.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]1.9e-9783.04Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VCA+PC GFPL D EN+GLEPIQEN     ANG AD  ENA
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA

Query:  SSFVEGNSISKGSRNKNVET-SNA
        SSF EGN  SKGSRNKNVE+ SNA
Subjt:  SSFVEGNSISKGSRNKNVET-SNA

XP_023524777.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]1.2e-9682.59Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVC RLVCARIHLNASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VCA+PC GFPL D EN+GLEPIQEN     ANG AD  ENA
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA

Query:  SSFVEGNSISKGSRNKN-VETSNA
        SSF EGN  SKGSRNKN V  SNA
Subjt:  SSFVEGNSISKGSRNKN-VETSNA

TrEMBL top hitse value%identityAlignment
A0A1S3C364 RING-H2 finger protein ATL8-like2.3e-9382.22Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF IASRSD +GLERGLHG+E   VANFPTKKY+D+YFSSMRNAQCTVCLADYH ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLE-PIQENHCSLGANGA-DSTEN
        RILPYCGHSFHVNCIDIWLHQHSTCPVCR+SLRE  DKKR MQPLFSSAIRS   LNS+    PC GFPLRDLEN+GLE PIQENH + GANGA D  EN
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLE-PIQENHCSLGANGA-DSTEN

Query:  ASSFVEGNSISKGSRNKNVET-SNA
        AS F+EGN  SKG RNKNVE+ SNA
Subjt:  ASSFVEGNSISKGSRNKNVET-SNA

A0A5D3CKS4 RING-H2 finger protein ATL8-like2.3e-9382.22Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF IASRSD +GLERGLHG+E   VANFPTKKY+D+YFSSMRNAQCTVCLADYH ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLE-PIQENHCSLGANGA-DSTEN
        RILPYCGHSFHVNCIDIWLHQHSTCPVCR+SLRE  DKKR MQPLFSSAIRS   LNS+    PC GFPLRDLEN+GLE PIQENH + GANGA D  EN
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLE-PIQENHCSLGANGA-DSTEN

Query:  ASSFVEGNSISKGSRNKNVET-SNA
        AS F+EGN  SKG RNKNVE+ SNA
Subjt:  ASSFVEGNSISKGSRNKNVET-SNA

A0A6J1BZK6 RING-H2 finger protein ATL38-like2.3e-12299.1Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANGADSTENAS
        RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVC HPCDGFPLRDLENSGLEPIQENHCS GANGADSTENAS
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANGADSTENAS

Query:  SFVEGNSISKGSRNKNVETSNA
        SFVEGNSISKGSRNKNVETSNA
Subjt:  SFVEGNSISKGSRNKNVETSNA

A0A6J1H8I0 RING-H2 finger protein ATL74-like9.9e-9782.59Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADY+ ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VCA+PC GFPL D EN+GLEPIQEN     ANG AD  ENA
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA

Query:  SSFVEGNSISKGSRNKN-VETSNA
        SSF EGN  SKGSRNKN V  SNA
Subjt:  SSFVEGNSISKGSRNKN-VETSNA

A0A6J1JQ55 RING-H2 finger protein ATL74-like9.0e-9883.04Show/hide
Query:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL
        MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSD +GLERG HG+E F VANFPTKKYSDEYFSSMRNAQCTVCLADYH ED+L
Subjt:  MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDIL

Query:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA
        RILPYCGHSFHV CIDIWLH+HSTCPVCR SLRE PDKKR +QPLFSSAIRSHY LNS+VCA+PC GFPL D EN+GLEPIQEN     ANG AD  ENA
Subjt:  RILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANG-ADSTENA

Query:  SSFVEGNSISKGSRNKNVET-SNA
        SSF EGN  SKGSRNKNVE+ SNA
Subjt:  SSFVEGNSISKGSRNKNVET-SNA

SwissProt top hitse value%identityAlignment
O64762 RING-H2 finger protein ATL381.6e-1430.99Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFA---IASRSDFNGLERGLHGLEAFAVANFPTKKYSD--EYFSSMRNAQCTVCLADYHCEDILRI
        LV+T+I F +  + +  VC R    + +   S   F    + SR+        + GL+   + +FPT  YS+  E    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFA---IASRSDFNGLERGLHGLEAFAVANFPTKKYSD--EYFSSMRNAQCTVCLADYHCEDILRI

Query:  LPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP
        +P C H FH +C+ +WL  HSTCP+CRV L   P ++  + P
Subjt:  LPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP

Q8RXX9 E3 ubiquitin-protein ligase ATL63.5e-1439Show/hide
Query:  SRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNA--QCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP
        SR+  N   R   GL+   V  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH +CID WL  H TCPVCR +L E   +   ++P
Subjt:  SRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNA--QCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP

Q9M0R5 Putative RING-H2 finger protein ATL362.7e-1433.06Show/hide
Query:  VFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSM--RNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH
        +F+   +V   +H    R     A +   +   R   GLE   + +FPT  YS+     +     +C +CL+++  ++ LR +P C H+FH NCID+WL 
Subjt:  VFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSM--RNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH

Query:  QHSTCPVCRVSLREAPDKKRP
          STCPVCR +L   P +  P
Subjt:  QHSTCPVCRVSLREAPDKKRP

Q9SN27 E3 ubiquitin-protein ligase ATL594.5e-1441.18Show/hide
Query:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP
        N L     GL        P   Y + +  ++ + QC+VCL DY  E+ L+ +P CGH+FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP

Q9SN28 RING-H2 finger protein ATL72.0e-1441.18Show/hide
Query:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP
        N L     GL        P   Y + +   ++++QC+VCL DY  E+ L+ +P CGH+FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP

Arabidopsis top hitse value%identityAlignment
AT2G34990.1 RING/U-box superfamily protein1.1e-1530.99Show/hide
Query:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFA---IASRSDFNGLERGLHGLEAFAVANFPTKKYSD--EYFSSMRNAQCTVCLADYHCEDILRI
        LV+T+I F +  + +  VC R    + +   S   F    + SR+        + GL+   + +FPT  YS+  E    +   +C VC+ ++   + LR+
Subjt:  LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFA---IASRSDFNGLERGLHGLEAFAVANFPTKKYSD--EYFSSMRNAQCTVCLADYHCEDILRI

Query:  LPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP
        +P C H FH +C+ +WL  HSTCP+CRV L   P ++  + P
Subjt:  LPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP

AT3G05200.1 RING/U-box superfamily protein2.5e-1539Show/hide
Query:  SRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNA--QCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP
        SR+  N   R   GL+   V  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH +CID WL  H TCPVCR +L E   +   ++P
Subjt:  SRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNA--QCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQP

AT4G09120.1 RING/U-box superfamily protein1.9e-1533.06Show/hide
Query:  VFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSM--RNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH
        +F+   +V   +H    R     A +   +   R   GLE   + +FPT  YS+     +     +C +CL+++  ++ LR +P C H+FH NCID+WL 
Subjt:  VFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSM--RNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLH

Query:  QHSTCPVCRVSLREAPDKKRP
          STCPVCR +L   P +  P
Subjt:  QHSTCPVCRVSLREAPDKKRP

AT4G10150.1 RING/U-box superfamily protein1.4e-1541.18Show/hide
Query:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP
        N L     GL        P   Y + +   ++++QC+VCL DY  E+ L+ +P CGH+FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP

AT4G10160.1 RING/U-box superfamily protein3.2e-1541.18Show/hide
Query:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP
        N L     GL        P   Y + +  ++ + QC+VCL DY  E+ L+ +P CGH+FH+ CID+WL  H+TCP+CR+SL   P
Subjt:  NGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSFHVNCIDIWLHQHSTCPVCRVSLREAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTCGTCCGGGATAAACTTGGTGATGACCGTGATTGGGTTCACGGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTAGTTTGTGCTCGGATTCATCTCAA
TGCTTCACGGCGATCCTTCGCAATCGCTTCTAGATCTGATTTCAATGGGCTGGAACGGGGATTACACGGTCTTGAGGCGTTTGCTGTAGCCAACTTTCCAACTAAGAAGT
ACAGCGATGAATACTTCTCATCTATGAGAAATGCCCAATGCACAGTTTGCTTGGCAGATTATCATTGTGAAGACATACTGCGTATTCTCCCCTACTGTGGACACTCCTTT
CATGTGAACTGCATAGACATATGGCTGCATCAGCACTCGACGTGCCCGGTTTGTCGGGTATCCTTACGCGAGGCCCCAGACAAAAAACGACCGATGCAACCTTTGTTTAG
TTCAGCAATTCGCTCTCATTACACCCTCAACTCAAATGTCTGCGCTCATCCCTGCGACGGGTTCCCTTTAAGAGACCTTGAAAACAGTGGGCTGGAGCCAATCCAGGAGA
ACCACTGCTCACTGGGGGCCAATGGAGCAGATTCAACGGAGAACGCTTCCTCATTTGTCGAAGGTAACTCGATTAGTAAAGGCTCAAGAAACAAAAATGTAGAAACATCA
AATGCT
mRNA sequenceShow/hide mRNA sequence
ATGATGTCGTCCGGGATAAACTTGGTGATGACCGTGATTGGGTTCACGGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTAGTTTGTGCTCGGATTCATCTCAA
TGCTTCACGGCGATCCTTCGCAATCGCTTCTAGATCTGATTTCAATGGGCTGGAACGGGGATTACACGGTCTTGAGGCGTTTGCTGTAGCCAACTTTCCAACTAAGAAGT
ACAGCGATGAATACTTCTCATCTATGAGAAATGCCCAATGCACAGTTTGCTTGGCAGATTATCATTGTGAAGACATACTGCGTATTCTCCCCTACTGTGGACACTCCTTT
CATGTGAACTGCATAGACATATGGCTGCATCAGCACTCGACGTGCCCGGTTTGTCGGGTATCCTTACGCGAGGCCCCAGACAAAAAACGACCGATGCAACCTTTGTTTAG
TTCAGCAATTCGCTCTCATTACACCCTCAACTCAAATGTCTGCGCTCATCCCTGCGACGGGTTCCCTTTAAGAGACCTTGAAAACAGTGGGCTGGAGCCAATCCAGGAGA
ACCACTGCTCACTGGGGGCCAATGGAGCAGATTCAACGGAGAACGCTTCCTCATTTGTCGAAGGTAACTCGATTAGTAAAGGCTCAAGAAACAAAAATGTAGAAACATCA
AATGCT
Protein sequenceShow/hide protein sequence
MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFAIASRSDFNGLERGLHGLEAFAVANFPTKKYSDEYFSSMRNAQCTVCLADYHCEDILRILPYCGHSF
HVNCIDIWLHQHSTCPVCRVSLREAPDKKRPMQPLFSSAIRSHYTLNSNVCAHPCDGFPLRDLENSGLEPIQENHCSLGANGADSTENASSFVEGNSISKGSRNKNVETS
NA