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MS009154 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009154
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold220:280118..280258
RNA-Seq ExpressionMS009154
SyntenyMS009154
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsIPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AMC30876.1 ATP-dependent Clp protease proteolytic subunit [Desmodium illinoense]1.7e-0868.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KPLW+ISE +ERDVFMSA+ AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
KAB1994512.1 hypothetical protein ES319_D13G104100v1 [Gossypium barbadense]1.7e-0868.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        LCK++TRV+VQ T KPLW +SE +ERDVFMSA  AQ HGI++LV VK
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
TYH34185.1 hypothetical protein ES332_D13G111300v1 [Gossypium tomentosum]1.7e-0868.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        LCK++TRV+VQ T KPLW +SE +ERDVFMSA  AQ HGI++LV VK
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
YP_009490023.1 clp protease proteolytic subunit [Saxifraga stolonifera]1.7e-0868.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KPLW++SE +ERDVFMSA  AQTHGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
YP_009752775.1 clp protease proteolytic subunit [Cyclantheropsis parviflora]1.7e-0870.21Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KPLW+ISE +ERDVFMSAI AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
TrEMBL top hitse value%identityAlignment
A0A0Y0TYA6 ATP-dependent Clp protease proteolytic subunit8.2e-0968.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KPLW+ISE +ERDVFMSA+ AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
A0A5D1ZZI8 Uncharacterized protein8.2e-0968.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        LCK++TRV+VQ T KPLW +SE +ERDVFMSA  AQ HGI++LV VK
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
A0A5D2HV66 Uncharacterized protein8.2e-0968.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        LCK++TRV+VQ T KPLW +SE +ERDVFMSA  AQ HGI++LV VK
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
A0A5J5NK17 Uncharacterized protein8.2e-0968.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        LCK++TRV+VQ T KPLW +SE +ERDVFMSA  AQ HGI++LV VK
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
A0A6H0EUA0 ATP-dependent Clp protease proteolytic subunit8.2e-0970.21Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KPLW+ISE +ERDVFMSAI AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
SwissProt top hitse value%identityAlignment
A4QJE0 ATP-dependent Clp protease proteolytic subunit1.9e-1063.83Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KP+W++SE +ERDVFMSA  AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
A4QJM4 ATP-dependent Clp protease proteolytic subunit1.9e-1063.83Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KP+W++SE +ERDVFMSA  AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
A6MM61 ATP-dependent Clp protease proteolytic subunit8.4e-1168.09Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +TVTRV+VQ T  PLW++SE +ERDVFMSAI AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
Q2PMR0 ATP-dependent Clp protease proteolytic subunit1.1e-1068.89Show/hide
Query:  KTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        +T+TRV+VQ T KPLW+ISE +ERDVFMSA  AQ HGI++LVAV+
Subjt:  KTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
Q49KX3 ATP-dependent Clp protease proteolytic subunit1.4e-1063.83Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KPLW++SE +ERDVFMSA  AQ HGI++LVA++
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
Arabidopsis top hitse value%identityAlignment
ATCG00670.1 plastid-encoded CLP P1.0e-1165.96Show/hide
Query:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK
        L +T+TRV+VQ T KP+W+ISE +ERDVFMSA  AQ HGI++LVAV+
Subjt:  LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGTGCAAAACCGTCACAAGGGTTCATGTACAAGGAACAGTCAAACCCTTATGGATTATATCCGAATACATAGAAAGGGATGTTTTTATGTCGGCAATAGGAGCCCAAAC
TCATGGAATTATTAATCTTGTAGCAGTTAAA
mRNA sequenceShow/hide mRNA sequence
CTGTGCAAAACCGTCACAAGGGTTCATGTACAAGGAACAGTCAAACCCTTATGGATTATATCCGAATACATAGAAAGGGATGTTTTTATGTCGGCAATAGGAGCCCAAAC
TCATGGAATTATTAATCTTGTAGCAGTTAAA
Protein sequenceShow/hide protein sequence
LCKTVTRVHVQGTVKPLWIISEYIERDVFMSAIGAQTHGIINLVAVK